RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 KMT2DO14686 5537 aa7.28□□□□□ -1.24
PHGDH-213ENST00000641272 MDN1Q9NU22 5596 aa7.27□□□□□ -1.25
PHGDH-213ENST00000641272 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
PHGDH-213ENST00000641272 ETDBQ3ZM63 59 aa7.22□□□□□ -1.25
PHGDH-213ENST00000641272 TRAV22A0A0B4J277 110 aa7.21□□□□□ -1.26
PHGDH-213ENST00000641272 A0A1B0GV90 55 aa7.21□□□□□ -1.26
PHGDH-213ENST00000641272 CRIPTQ9P021 101 aa7.2□□□□□ -1.26
PHGDH-213ENST00000641272 LOC101927531A0A1B0GV80 90 aa7.17□□□□□ -1.26
PHGDH-213ENST00000641272 NDUFC1O43677 76 aa7.1□□□□□ -1.27
PHGDH-213ENST00000641272 ACYP1P07311 99 aa7.1□□□□□ -1.27
PHGDH-213ENST00000641272 ADM2Q7Z4H4 148 aa7.09□□□□□ -1.27
PHGDH-213ENST00000641272 SPRR2FQ96RM1 72 aa7.09□□□□□ -1.27
PHGDH-213ENST00000641272 H0Y9P7 68 aa7.08□□□□□ -1.28
PHGDH-213ENST00000641272 H0YAA0 97 aa7.08□□□□□ -1.28
PHGDH-213ENST00000641272 A8MUN3 132 aa7.07□□□□□ -1.28
PHGDH-213ENST00000641272 FAM240AA0A1B0GVK7 77 aa7.05□□□□□ -1.28
PHGDH-213ENST00000641272 SPRR2EP22531 72 aa7.05□□□□□ -1.28
PHGDH-213ENST00000641272 SPRR2BP35325 72 aa7.05□□□□□ -1.28
PHGDH-213ENST00000641272 SPRR2AP35326 72 aa7.05□□□□□ -1.28
PHGDH-213ENST00000641272 MT1XP80297 61 aa7.04□□□□□ -1.28
PHGDH-213ENST00000641272 HIST1H4AP62805 103 aaKnown RBP7.03□□□□□ -1.28
PHGDH-213ENST00000641272 UQCRQO14949 82 aa7.02□□□□□ -1.29
PHGDH-213ENST00000641272 KRTAP2-3P0C7H8 128 aa7.02□□□□□ -1.29
PHGDH-213ENST00000641272 KRTAP2-4Q9BYR9 128 aa7.02□□□□□ -1.29
PHGDH-213ENST00000641272 J3QR89 54 aa7.01□□□□□ -1.29
PHGDH-213ENST00000641272 PRO2289Q9P1D8 64 aa7.01□□□□□ -1.29
PHGDH-213ENST00000641272 ATOX1O00244 68 aa7□□□□□ -1.29
PHGDH-213ENST00000641272 ATP5EP2Q5VTU8 51 aa6.97□□□□□ -1.29
PHGDH-213ENST00000641272 KRTAP8-1Q8IUC2 63 aa6.96□□□□□ -1.3
PHGDH-213ENST00000641272 PLAC4Q8WY50 150 aa6.95□□□□□ -1.3
PHGDH-213ENST00000641272 LINC00208Q96KT6 92 aa6.93□□□□□ -1.3
PHGDH-213ENST00000641272 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
PHGDH-213ENST00000641272 P0C880 135 aa6.9□□□□□ -1.3
PHGDH-213ENST00000641272 R4GN34 69 aa6.9□□□□□ -1.3
PHGDH-213ENST00000641272 M0QZ58 72 aa6.88□□□□□ -1.31
PHGDH-213ENST00000641272 LCE1AQ5T7P2 110 aa6.88□□□□□ -1.31
PHGDH-213ENST00000641272 K7ERU9 68 aa6.86□□□□□ -1.31
PHGDH-213ENST00000641272 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
PHGDH-213ENST00000641272 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
PHGDH-213ENST00000641272 LINC01554Q52M75 96 aa6.83□□□□□ -1.32
PHGDH-213ENST00000641272 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
PHGDH-213ENST00000641272 MP68P56378 58 aa6.82□□□□□ -1.32
PHGDH-213ENST00000641272 SPRR2DP22532 72 aa6.81□□□□□ -1.32
PHGDH-213ENST00000641272 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
PHGDH-213ENST00000641272 OCR1Q9BZK8 76 aa6.79□□□□□ -1.32
PHGDH-213ENST00000641272 KRTAP2-2Q9BYT5 123 aa6.78□□□□□ -1.32
PHGDH-213ENST00000641272 KRTAP2-1Q9BYU5 128 aa6.78□□□□□ -1.32
PHGDH-213ENST00000641272 KRTAP3-2Q9BYR7 98 aa6.75□□□□□ -1.33
PHGDH-213ENST00000641272 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
PHGDH-213ENST00000641272 DMAC1Q96GE9 116 aa6.72□□□□□ -1.33
PHGDH-213ENST00000641272 MT-ATP8P03928 68 aa6.65□□□□□ -1.34
PHGDH-213ENST00000641272 SCGB1A1P11684 91 aa6.64□□□□□ -1.35
PHGDH-213ENST00000641272 KRTAP10-12P60413 245 aa6.64□□□□□ -1.35
PHGDH-213ENST00000641272 H3BPC8 53 aa6.63□□□□□ -1.35
PHGDH-213ENST00000641272 LCE3BQ5TA77 95 aa6.63□□□□□ -1.35
PHGDH-213ENST00000641272 SMIM20Q8N5G0 67 aa6.56□□□□□ -1.36
PHGDH-213ENST00000641272 TRAV7A0A075B6U4 112 aa6.53□□□□□ -1.36
PHGDH-213ENST00000641272 ACYP2P14621 99 aa6.47□□□□□ -1.37
PHGDH-213ENST00000641272 SPTSSBQ8NFR3 76 aa6.44□□□□□ -1.38
PHGDH-213ENST00000641272 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
PHGDH-213ENST00000641272 SERP2Q8N6R1 65 aa6.38□□□□□ -1.39
PHGDH-213ENST00000641272 GPR98Q8WXG9 6306 aa6.37□□□□□ -1.39
PHGDH-213ENST00000641272 DSTQ03001 7570 aaKnown RBP6.37□□□□□ -1.39
PHGDH-213ENST00000641272 KRTAP13-4Q3LI77 160 aa6.37□□□□□ -1.39
PHGDH-213ENST00000641272 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
PHGDH-213ENST00000641272 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
PHGDH-213ENST00000641272 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
PHGDH-213ENST00000641272 COX7CP15954 63 aa6.27□□□□□ -1.41
PHGDH-213ENST00000641272 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
PHGDH-213ENST00000641272 MT1EP04732 61 aa6.26□□□□□ -1.41
PHGDH-213ENST00000641272 LCE5AQ5TCM9 118 aa6.26□□□□□ -1.41
PHGDH-213ENST00000641272 KRTAP19-3Q7Z4W3 81 aa6.24□□□□□ -1.41
PHGDH-213ENST00000641272 ANAPC13Q9BS18 74 aa6.22□□□□□ -1.41
PHGDH-213ENST00000641272 SPANXA2-OT1Q8N9U9 137 aa6.2□□□□□ -1.42
PHGDH-213ENST00000641272 A0A0D9SG42 100 aa6.17□□□□□ -1.42
PHGDH-213ENST00000641272 CYSTM1Q9H1C7 97 aa6.12□□□□□ -1.43
PHGDH-213ENST00000641272 KRTAP19-5Q3LI72 72 aa6.09□□□□□ -1.43
PHGDH-213ENST00000641272 H7BZZ5 65 aa6.08□□□□□ -1.44
PHGDH-213ENST00000641272 LCE1DQ5T752 114 aa6.07□□□□□ -1.44
PHGDH-213ENST00000641272 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
PHGDH-213ENST00000641272 SPINT4Q6UDR6 99 aa6.07□□□□□ -1.44
PHGDH-213ENST00000641272 COA5Q86WW8 74 aa6.07□□□□□ -1.44
PHGDH-213ENST00000641272 CCDC179H3BU77 68 aa6.04□□□□□ -1.44
PHGDH-213ENST00000641272 MT4P47944 62 aa6.01□□□□□ -1.45
PHGDH-213ENST00000641272 SERP1Q9Y6X1 66 aa6.01□□□□□ -1.45
PHGDH-213ENST00000641272 MT1GP13640 62 aa6□□□□□ -1.45
PHGDH-213ENST00000641272 SEC61GP60059 68 aa6□□□□□ -1.45
PHGDH-213ENST00000641272 PP632Q6XCG6 107 aa5.98□□□□□ -1.45
PHGDH-213ENST00000641272 MT1MQ8N339 61 aa5.98□□□□□ -1.45
PHGDH-213ENST00000641272 HMCN1Q96RW7 5635 aa5.97□□□□□ -1.45
PHGDH-213ENST00000641272 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
PHGDH-213ENST00000641272 A0A1B0GU33 70 aa5.94□□□□□ -1.46
PHGDH-213ENST00000641272 ATP5EP56381 51 aaPredicted RBP5.94□□□□□ -1.46
PHGDH-213ENST00000641272 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
PHGDH-213ENST00000641272 MT1LQ93083 61 aa5.94□□□□□ -1.46
PHGDH-213ENST00000641272 AHNAK2Q8IVF2 5795 aa5.91□□□□□ -1.46
PHGDH-213ENST00000641272 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
PHGDH-213ENST00000641272 TMEM258P61165 79 aa5.88□□□□□ -1.47
PHGDH-213ENST00000641272 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
PHGDH-213ENST00000641272 C10orf95Q9H7T3 257 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms