RNA–Protein interactions for RNA: ENST00000640338.1

SYNJ2-208, Transcript of synaptojanin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNJ2, Length 3,959 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ2-208ENST00000640338 MYCBP2O75592 4640 aa6.74□□□□□ -1.33
SYNJ2-208ENST00000640338 RPS29P62273 56 aaKnown RBP6.72□□□□□ -1.33
SYNJ2-208ENST00000640338 LRP1Q07954 4544 aaKnown RBP6.71□□□□□ -1.34
SYNJ2-208ENST00000640338 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
SYNJ2-208ENST00000640338 HSPG2P98160 4391 aa6.64□□□□□ -1.35
SYNJ2-208ENST00000640338 KRTAP15-1Q3LI76 137 aa6.64□□□□□ -1.35
SYNJ2-208ENST00000640338 KRTAP10-4P60372 401 aaPredicted RBP6.63□□□□□ -1.35
SYNJ2-208ENST00000640338 KRTAP10-8P60410 259 aa6.63□□□□□ -1.35
SYNJ2-208ENST00000640338 KRTAP12-2P59991 146 aa6.63□□□□□ -1.35
SYNJ2-208ENST00000640338 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
SYNJ2-208ENST00000640338 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
SYNJ2-208ENST00000640338 S4R3F8 94 aa6.61□□□□□ -1.35
SYNJ2-208ENST00000640338 PKHD1L1Q86WI1 4243 aa6.61□□□□□ -1.35
SYNJ2-208ENST00000640338 KRTAP3-2Q9BYR7 98 aa6.6□□□□□ -1.35
SYNJ2-208ENST00000640338 FAT3Q8TDW7 4589 aa6.53□□□□□ -1.36
SYNJ2-208ENST00000640338 A0A1B0GVY2 172 aa6.52□□□□□ -1.37
SYNJ2-208ENST00000640338 KMT2CQ8NEZ4 4911 aaKnown RBP6.49□□□□□ -1.37
SYNJ2-208ENST00000640338 LPAP08519 4548 aa6.49□□□□□ -1.37
SYNJ2-208ENST00000640338 XP32Q5T750 250 aa6.48□□□□□ -1.37
SYNJ2-208ENST00000640338 KRTAP12-1P59990 96 aa6.47□□□□□ -1.37
SYNJ2-208ENST00000640338 TNXBP22105 4242 aa6.43□□□□□ -1.38
SYNJ2-208ENST00000640338 Q5VSD8 79 aa6.41□□□□□ -1.38
SYNJ2-208ENST00000640338 A0A0A0MQY5 61 aa6.4□□□□□ -1.39
SYNJ2-208ENST00000640338 LRP2P98164 4655 aa6.38□□□□□ -1.39
SYNJ2-208ENST00000640338 RYR2Q92736 4967 aa6.38□□□□□ -1.39
SYNJ2-208ENST00000640338 KRTAP17-1Q9BYP8 105 aa6.34□□□□□ -1.39
SYNJ2-208ENST00000640338 KIAA1109Q2LD37 5005 aa6.3□□□□□ -1.4
SYNJ2-208ENST00000640338 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
SYNJ2-208ENST00000640338 M0QZ58 72 aa6.26□□□□□ -1.41
SYNJ2-208ENST00000640338 PLAC4Q8WY50 150 aa6.25□□□□□ -1.41
SYNJ2-208ENST00000640338 RYR1P21817 5038 aa6.23□□□□□ -1.41
SYNJ2-208ENST00000640338 RYR3Q15413 4870 aa6.22□□□□□ -1.41
SYNJ2-208ENST00000640338 MT1HL1P0DM35 61 aa6.19□□□□□ -1.42
SYNJ2-208ENST00000640338 R4GN34 69 aa6.18□□□□□ -1.42
SYNJ2-208ENST00000640338 ABCA13Q86UQ4 5058 aa6.16□□□□□ -1.42
SYNJ2-208ENST00000640338 LORP23490 312 aaPredicted RBP6.12□□□□□ -1.43
SYNJ2-208ENST00000640338 EPPK1P58107 5090 aaKnown RBP6□□□□□ -1.45
SYNJ2-208ENST00000640338 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
SYNJ2-208ENST00000640338 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
SYNJ2-208ENST00000640338 KRTAP21-3Q3LHN1 58 aa5.98□□□□□ -1.45
SYNJ2-208ENST00000640338 MUC2Q02817 5179 aa5.98□□□□□ -1.45
SYNJ2-208ENST00000640338 KRTAP4-1Q9BYQ7 146 aa5.93□□□□□ -1.46
SYNJ2-208ENST00000640338 MUC17Q685J3 4493 aa5.86□□□□□ -1.47
SYNJ2-208ENST00000640338 SEC61BP60468 96 aaKnown RBP5.84□□□□□ -1.47
SYNJ2-208ENST00000640338 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
SYNJ2-208ENST00000640338 J3QL48 77 aa5.76□□□□□ -1.49
SYNJ2-208ENST00000640338 HERC2O95714 4834 aa5.68□□□□□ -1.5
SYNJ2-208ENST00000640338 KRTAP19-2Q3LHN2 52 aa5.67□□□□□ -1.5
SYNJ2-208ENST00000640338 TNP1P09430 55 aa5.65□□□□□ -1.5
SYNJ2-208ENST00000640338 FAT4Q6V0I7 4981 aa5.65□□□□□ -1.5
SYNJ2-208ENST00000640338 PCLOQ9Y6V0 5065 aa5.64□□□□□ -1.51
SYNJ2-208ENST00000640338 FLGP20930 4061 aaPredicted RBP5.54□□□□□ -1.52
SYNJ2-208ENST00000640338 HERC1Q15751 4861 aa5.53□□□□□ -1.52
SYNJ2-208ENST00000640338 SPRR5A0A1B0GTR4 108 aa5.5□□□□□ -1.53
SYNJ2-208ENST00000640338 RNF213Q63HN8 5207 aa5.46□□□□□ -1.54
SYNJ2-208ENST00000640338 M0R2T5 61 aa5.43□□□□□ -1.54
SYNJ2-208ENST00000640338 BIRC6Q9NR09 4857 aa5.39□□□□□ -1.55
SYNJ2-208ENST00000640338 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
SYNJ2-208ENST00000640338 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
SYNJ2-208ENST00000640338 KRTAP19-1Q8IUB9 90 aa5.33□□□□□ -1.56
SYNJ2-208ENST00000640338 HMCN2Q8NDA2 5059 aa5.33□□□□□ -1.56
SYNJ2-208ENST00000640338 LCE2CQ5TA81 110 aa5.3□□□□□ -1.56
SYNJ2-208ENST00000640338 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
SYNJ2-208ENST00000640338 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
SYNJ2-208ENST00000640338 UBR4Q5T4S7 5183 aa5.27□□□□□ -1.57
SYNJ2-208ENST00000640338 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
SYNJ2-208ENST00000640338 MT1FP04733 61 aa5.21□□□□□ -1.58
SYNJ2-208ENST00000640338 MT1HP80294 61 aa5.17□□□□□ -1.58
SYNJ2-208ENST00000640338 INE1O15225 51 aa5.15□□□□□ -1.58
SYNJ2-208ENST00000640338 MT2AP02795 61 aa5.15□□□□□ -1.58
SYNJ2-208ENST00000640338 LCE2DQ5TA82 110 aaPredicted RBP5.09□□□□□ -1.59
SYNJ2-208ENST00000640338 KRTAP9-8Q9BYQ0 159 aa5.06□□□□□ -1.6
SYNJ2-208ENST00000640338 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
SYNJ2-208ENST00000640338 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
SYNJ2-208ENST00000640338 KRTAP8-1Q8IUC2 63 aa5.04□□□□□ -1.6
SYNJ2-208ENST00000640338 MT1XP80297 61 aa5.04□□□□□ -1.6
SYNJ2-208ENST00000640338 MT1BP07438 61 aa5.02□□□□□ -1.61
SYNJ2-208ENST00000640338 KRTAP10-12P60413 245 aa5.01□□□□□ -1.61
SYNJ2-208ENST00000640338 KRTAP10-7P60409 375 aaPredicted RBP5.01□□□□□ -1.61
SYNJ2-208ENST00000640338 KMT2DO14686 5537 aa5.01□□□□□ -1.61
SYNJ2-208ENST00000640338 USH2AO75445 5202 aa4.99□□□□□ -1.61
SYNJ2-208ENST00000640338 KRTAP19-8Q3LI54 63 aa4.95□□□□□ -1.62
SYNJ2-208ENST00000640338 KRTAP9-3Q9BYQ3 159 aa4.82□□□□□ -1.64
SYNJ2-208ENST00000640338 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
SYNJ2-208ENST00000640338 KRTAP4-8A0A0G2JLE6 195 aa4.76□□□□□ -1.65
SYNJ2-208ENST00000640338 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
SYNJ2-208ENST00000640338 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
SYNJ2-208ENST00000640338 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
SYNJ2-208ENST00000640338 LCE2BO14633 110 aa4.69□□□□□ -1.66
SYNJ2-208ENST00000640338 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
SYNJ2-208ENST00000640338 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
SYNJ2-208ENST00000640338 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
SYNJ2-208ENST00000640338 KRTAP2-3P0C7H8 128 aa4.47□□□□□ -1.69
SYNJ2-208ENST00000640338 KRTAP2-4Q9BYR9 128 aa4.47□□□□□ -1.69
SYNJ2-208ENST00000640338 KRTAP2-1Q9BYU5 128 aa4.47□□□□□ -1.69
SYNJ2-208ENST00000640338 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
SYNJ2-208ENST00000640338 CRCT1Q9UGL9 99 aa4.36□□□□□ -1.71
SYNJ2-208ENST00000640338 MT1LQ93083 61 aa4.35□□□□□ -1.71
SYNJ2-208ENST00000640338 LOC100996750A0A140TA64 210 aa4.35□□□□□ -1.71
SYNJ2-208ENST00000640338 KRTAP4-3Q9BYR4 195 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms