RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 H3BPC8 53 aa4.54□□□□□ -1.68
SCARB2-220ENST00000640076 SPINK1P00995 79 aa4.54□□□□□ -1.68
SCARB2-220ENST00000640076 LINC00846Q9NV44 126 aa4.54□□□□□ -1.68
SCARB2-220ENST00000640076 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
SCARB2-220ENST00000640076 CHKB-CPT1BH3BT56 60 aa4.53□□□□□ -1.68
SCARB2-220ENST00000640076 RPS29P62273 56 aaKnown RBP4.53□□□□□ -1.68
SCARB2-220ENST00000640076 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
SCARB2-220ENST00000640076 A8MU10 97 aa4.52□□□□□ -1.69
SCARB2-220ENST00000640076 Q5VV11 94 aa4.52□□□□□ -1.69
SCARB2-220ENST00000640076 SPANXA2-OT1Q8N9U9 137 aa4.52□□□□□ -1.69
SCARB2-220ENST00000640076 C20orf166-AS1Q96NR2 134 aa4.51□□□□□ -1.69
SCARB2-220ENST00000640076 LIMD2Q9BT23 127 aa4.51□□□□□ -1.69
SCARB2-220ENST00000640076 UBL5Q9BZL1 73 aa4.51□□□□□ -1.69
SCARB2-220ENST00000640076 NREPQ16612 68 aa4.5□□□□□ -1.69
SCARB2-220ENST00000640076 DEFB116Q30KQ4 102 aa4.5□□□□□ -1.69
SCARB2-220ENST00000640076 Q5W150 140 aa4.49□□□□□ -1.69
SCARB2-220ENST00000640076 Q96NJ1 140 aa4.49□□□□□ -1.69
SCARB2-220ENST00000640076 LINC00472Q9H8W2 130 aa4.49□□□□□ -1.69
SCARB2-220ENST00000640076 P0C880 135 aa4.47□□□□□ -1.69
SCARB2-220ENST00000640076 KRTAP9-7A8MTY7 169 aa4.47□□□□□ -1.69
SCARB2-220ENST00000640076 TMEM254Q8TBM7 123 aa4.45□□□□□ -1.7
SCARB2-220ENST00000640076 IGKV4-1P06312 121 aa4.45□□□□□ -1.7
SCARB2-220ENST00000640076 DSCR10P59022 87 aa4.44□□□□□ -1.7
SCARB2-220ENST00000640076 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
SCARB2-220ENST00000640076 ATP5EP2Q5VTU8 51 aa4.43□□□□□ -1.7
SCARB2-220ENST00000640076 HERC1Q15751 4861 aa4.42□□□□□ -1.7
SCARB2-220ENST00000640076 Q8N9L7 120 aa4.41□□□□□ -1.7
SCARB2-220ENST00000640076 K7EQZ3 153 aa4.4□□□□□ -1.7
SCARB2-220ENST00000640076 NDUFB1O75438 58 aa4.39□□□□□ -1.71
SCARB2-220ENST00000640076 CSAG1Q6PB30 78 aa4.39□□□□□ -1.71
SCARB2-220ENST00000640076 LOC101927531A0A1B0GV80 90 aa4.36□□□□□ -1.71
SCARB2-220ENST00000640076 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
SCARB2-220ENST00000640076 SNURFQ9Y675 71 aa4.36□□□□□ -1.71
SCARB2-220ENST00000640076 A0A087WVE0 104 aa4.34□□□□□ -1.71
SCARB2-220ENST00000640076 MMP24-AS1A0A0U1RRL7 71 aa4.34□□□□□ -1.71
SCARB2-220ENST00000640076 KRTAP13-3Q3SY46 172 aa4.34□□□□□ -1.71
SCARB2-220ENST00000640076 HMCN2Q8NDA2 5059 aa4.33□□□□□ -1.72
SCARB2-220ENST00000640076 A0A1B0GU33 70 aa4.33□□□□□ -1.72
SCARB2-220ENST00000640076 C9orf92A6NGG3 77 aa4.33□□□□□ -1.72
SCARB2-220ENST00000640076 PRR15LQ9BU68 103 aa4.33□□□□□ -1.72
SCARB2-220ENST00000640076 TPRXLQ17RH7 258 aa4.32□□□□□ -1.72
SCARB2-220ENST00000640076 WFDC13Q8IUB5 93 aa4.32□□□□□ -1.72
SCARB2-220ENST00000640076 LPAP08519 4548 aa4.31□□□□□ -1.72
SCARB2-220ENST00000640076 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
SCARB2-220ENST00000640076 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
SCARB2-220ENST00000640076 LRP2P98164 4655 aa4.28□□□□□ -1.72
SCARB2-220ENST00000640076 DMAC1Q96GE9 116 aa4.26□□□□□ -1.73
SCARB2-220ENST00000640076 RPL37P61927 97 aaKnown RBP4.23□□□□□ -1.73
SCARB2-220ENST00000640076 KRTAP9-3Q9BYQ3 159 aa4.23□□□□□ -1.73
SCARB2-220ENST00000640076 TP53AIP1Q9HCN2 124 aa4.22□□□□□ -1.73
SCARB2-220ENST00000640076 ZCCHC13Q8WW36 166 aaKnown RBP4.2□□□□□ -1.74
SCARB2-220ENST00000640076 PCOTHQ58A44 107 aa4.18□□□□□ -1.74
SCARB2-220ENST00000640076 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
SCARB2-220ENST00000640076 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
SCARB2-220ENST00000640076 LINC01558Q9Y6Z2 57 aa4.16□□□□□ -1.74
SCARB2-220ENST00000640076 H0Y9P7 68 aa4.15□□□□□ -1.74
SCARB2-220ENST00000640076 SPINT4Q6UDR6 99 aa4.14□□□□□ -1.75
SCARB2-220ENST00000640076 R4GN34 69 aa4.14□□□□□ -1.75
SCARB2-220ENST00000640076 LINC00208Q96KT6 92 aa4.12□□□□□ -1.75
SCARB2-220ENST00000640076 SPINK7P58062 85 aa4.11□□□□□ -1.75
SCARB2-220ENST00000640076 RNF213Q63HN8 5207 aa4.11□□□□□ -1.75
SCARB2-220ENST00000640076 PRO2289Q9P1D8 64 aa4.1□□□□□ -1.75
SCARB2-220ENST00000640076 MUC2Q02817 5179 aa4.1□□□□□ -1.75
SCARB2-220ENST00000640076 KRTAP4-1Q9BYQ7 146 aa4.09□□□□□ -1.75
SCARB2-220ENST00000640076 UQCR11O14957 56 aa4.07□□□□□ -1.76
SCARB2-220ENST00000640076 MT3P25713 68 aa4.07□□□□□ -1.76
SCARB2-220ENST00000640076 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
SCARB2-220ENST00000640076 HRES1P13985 223 aa4.05□□□□□ -1.76
SCARB2-220ENST00000640076 SPATA8Q6RVD6 105 aa4□□□□□ -1.77
SCARB2-220ENST00000640076 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
SCARB2-220ENST00000640076 KRTAP19-2Q3LHN2 52 aa3.98□□□□□ -1.77
SCARB2-220ENST00000640076 FAT4Q6V0I7 4981 aa3.95□□□□□ -1.78
SCARB2-220ENST00000640076 FLGP20930 4061 aaPredicted RBP3.94□□□□□ -1.78
SCARB2-220ENST00000640076 H1FX-AS1Q4G0G2 97 aa3.92□□□□□ -1.78
SCARB2-220ENST00000640076 ACYP2P14621 99 aa3.89□□□□□ -1.79
SCARB2-220ENST00000640076 COA5Q86WW8 74 aa3.87□□□□□ -1.79
SCARB2-220ENST00000640076 S4R3F8 94 aa3.86□□□□□ -1.79
SCARB2-220ENST00000640076 MT1HP80294 61 aa3.85□□□□□ -1.79
SCARB2-220ENST00000640076 A0A1B0GU69 56 aa3.83□□□□□ -1.8
SCARB2-220ENST00000640076 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
SCARB2-220ENST00000640076 M0R2T5 61 aa3.8□□□□□ -1.8
SCARB2-220ENST00000640076 INE1O15225 51 aa3.73□□□□□ -1.81
SCARB2-220ENST00000640076 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
SCARB2-220ENST00000640076 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
SCARB2-220ENST00000640076 H0YAA0 97 aa3.7□□□□□ -1.82
SCARB2-220ENST00000640076 MT2AP02795 61 aa3.67□□□□□ -1.82
SCARB2-220ENST00000640076 MT1FP04733 61 aa3.65□□□□□ -1.83
SCARB2-220ENST00000640076 KRTAP10-10P60014 251 aa3.63□□□□□ -1.83
SCARB2-220ENST00000640076 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
SCARB2-220ENST00000640076 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
SCARB2-220ENST00000640076 SPRR2GQ9BYE4 73 aa3.54□□□□□ -1.84
SCARB2-220ENST00000640076 M0QZ58 72 aa3.54□□□□□ -1.84
SCARB2-220ENST00000640076 KRTAP13-4Q3LI77 160 aa3.54□□□□□ -1.84
SCARB2-220ENST00000640076 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
SCARB2-220ENST00000640076 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
SCARB2-220ENST00000640076 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
SCARB2-220ENST00000640076 KRTAP19-8Q3LI54 63 aa3.47□□□□□ -1.85
SCARB2-220ENST00000640076 USH2AO75445 5202 aa3.46□□□□□ -1.86
SCARB2-220ENST00000640076 A0A0D9SG42 100 aa3.45□□□□□ -1.86
SCARB2-220ENST00000640076 MT1BP07438 61 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms