RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 TENM2Q9NT68 2774 aa3.02□□□□□ -1.93
SCARB2-218ENST00000639715 KMT2AQ03164 3969 aa3.01□□□□□ -1.93
SCARB2-218ENST00000639715 DNAH9Q9NYC9 4486 aa3□□□□□ -1.93
SCARB2-218ENST00000639715 KIAA1109Q2LD37 5005 aa2.99□□□□□ -1.93
SCARB2-218ENST00000639715 KRTAP9-6A0A140TA67 174 aa2.99□□□□□ -1.93
SCARB2-218ENST00000639715 LRP1BQ9NZR2 4599 aa2.97□□□□□ -1.93
SCARB2-218ENST00000639715 DYNC1H1Q14204 4646 aaKnown RBP2.97□□□□□ -1.93
SCARB2-218ENST00000639715 DNAH17Q9UFH2 4485 aa2.96□□□□□ -1.94
SCARB2-218ENST00000639715 HUWE1Q7Z6Z7 4374 aaKnown RBP2.95□□□□□ -1.94
SCARB2-218ENST00000639715 R4GN34 69 aa2.95□□□□□ -1.94
SCARB2-218ENST00000639715 DNAH10Q8IVF4 4471 aa2.95□□□□□ -1.94
SCARB2-218ENST00000639715 M0QZ58 72 aa2.94□□□□□ -1.94
SCARB2-218ENST00000639715 PKHD1P08F94 4074 aa2.94□□□□□ -1.94
SCARB2-218ENST00000639715 KRTAP10-8P60410 259 aa2.92□□□□□ -1.94
SCARB2-218ENST00000639715 COL7A1Q02388 2944 aa2.92□□□□□ -1.94
SCARB2-218ENST00000639715 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
SCARB2-218ENST00000639715 DNAH2Q9P225 4427 aa2.91□□□□□ -1.94
SCARB2-218ENST00000639715 XP32Q5T750 250 aa2.9□□□□□ -1.95
SCARB2-218ENST00000639715 A0A1B0GVY2 172 aa2.89□□□□□ -1.95
SCARB2-218ENST00000639715 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
SCARB2-218ENST00000639715 KRTAP13-4Q3LI77 160 aa2.89□□□□□ -1.95
SCARB2-218ENST00000639715 CSMD3Q7Z407 3707 aa2.88□□□□□ -1.95
SCARB2-218ENST00000639715 KRTAP3-1Q9BYR8 98 aa2.88□□□□□ -1.95
SCARB2-218ENST00000639715 DNAH11Q96DT5 4516 aa2.87□□□□□ -1.95
SCARB2-218ENST00000639715 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
SCARB2-218ENST00000639715 PLECQ15149 4684 aaKnown RBP2.85□□□□□ -1.95
SCARB2-218ENST00000639715 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
SCARB2-218ENST00000639715 ABCA13Q86UQ4 5058 aa2.85□□□□□ -1.95
SCARB2-218ENST00000639715 KRTAP10-6P60371 365 aaPredicted RBP2.84□□□□□ -1.95
SCARB2-218ENST00000639715 RYR1P21817 5038 aa2.84□□□□□ -1.95
SCARB2-218ENST00000639715 KRTAP12-1P59990 96 aa2.84□□□□□ -1.96
SCARB2-218ENST00000639715 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
SCARB2-218ENST00000639715 FRAS1Q86XX4 4008 aa2.81□□□□□ -1.96
SCARB2-218ENST00000639715 PP632Q6XCG6 107 aa2.8□□□□□ -1.96
SCARB2-218ENST00000639715 PKHD1L1Q86WI1 4243 aa2.8□□□□□ -1.96
SCARB2-218ENST00000639715 PRO2289Q9P1D8 64 aa2.8□□□□□ -1.96
SCARB2-218ENST00000639715 KRTAP10-4P60372 401 aaPredicted RBP2.75□□□□□ -1.97
SCARB2-218ENST00000639715 HSPG2P98160 4391 aa2.74□□□□□ -1.97
SCARB2-218ENST00000639715 TNP1P09430 55 aa2.71□□□□□ -1.98
SCARB2-218ENST00000639715 STARD9Q9P2P6 4700 aa2.71□□□□□ -1.98
SCARB2-218ENST00000639715 PKD1P98161 4303 aa2.71□□□□□ -1.98
SCARB2-218ENST00000639715 KRTAP4-5Q9BYR2 181 aa2.7□□□□□ -1.98
SCARB2-218ENST00000639715 LCE2BO14633 110 aa2.7□□□□□ -1.98
SCARB2-218ENST00000639715 INE1O15225 51 aa2.69□□□□□ -1.98
SCARB2-218ENST00000639715 HMCN2Q8NDA2 5059 aa2.68□□□□□ -1.98
SCARB2-218ENST00000639715 TNXBP22105 4242 aa2.68□□□□□ -1.98
SCARB2-218ENST00000639715 HERC1Q15751 4861 aa2.67□□□□□ -1.98
SCARB2-218ENST00000639715 MT1HL1P0DM35 61 aa2.67□□□□□ -1.98
SCARB2-218ENST00000639715 FAT4Q6V0I7 4981 aa2.66□□□□□ -1.98
SCARB2-218ENST00000639715 LOC100996750A0A140TA64 210 aa2.66□□□□□ -1.98
SCARB2-218ENST00000639715 KRTAP4-6Q9BYQ5 205 aa2.66□□□□□ -1.98
SCARB2-218ENST00000639715 LCE2AQ5TA79 106 aaPredicted RBP2.65□□□□□ -1.98
SCARB2-218ENST00000639715 LCE2CQ5TA81 110 aa2.65□□□□□ -1.98
SCARB2-218ENST00000639715 MYCBP2O75592 4640 aa2.65□□□□□ -1.99
SCARB2-218ENST00000639715 CRCT1Q9UGL9 99 aa2.65□□□□□ -1.99
SCARB2-218ENST00000639715 DNAH5Q8TE73 4624 aa2.64□□□□□ -1.99
SCARB2-218ENST00000639715 UBR4Q5T4S7 5183 aa2.64□□□□□ -1.99
SCARB2-218ENST00000639715 FAT1Q14517 4588 aa2.64□□□□□ -1.99
SCARB2-218ENST00000639715 DNAH8Q96JB1 4490 aa2.63□□□□□ -1.99
SCARB2-218ENST00000639715 APOBP04114 4563 aaKnown RBP2.63□□□□□ -1.99
SCARB2-218ENST00000639715 KRTAP9-7A8MTY7 169 aa2.58□□□□□ -2
SCARB2-218ENST00000639715 KRTAP10-10P60014 251 aa2.57□□□□□ -2
SCARB2-218ENST00000639715 SSPOA2VEC9 5147 aa2.53□□□□□ -2.01
SCARB2-218ENST00000639715 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.52□□□□□ -2.01
SCARB2-218ENST00000639715 LORP23490 312 aaPredicted RBP2.51□□□□□ -2.01
SCARB2-218ENST00000639715 MUC17Q685J3 4493 aa2.5□□□□□ -2.01
SCARB2-218ENST00000639715 RNF213Q63HN8 5207 aa2.47□□□□□ -2.01
SCARB2-218ENST00000639715 KRTAP23-1A1A580 65 aa2.47□□□□□ -2.01
SCARB2-218ENST00000639715 MUC2Q02817 5179 aa2.46□□□□□ -2.02
SCARB2-218ENST00000639715 SPRR5A0A1B0GTR4 108 aa2.41□□□□□ -2.02
SCARB2-218ENST00000639715 KRTAP4-1Q9BYQ7 146 aa2.4□□□□□ -2.03
SCARB2-218ENST00000639715 KRTAP6-3Q3LI67 103 aa2.38□□□□□ -2.03
SCARB2-218ENST00000639715 LRP1Q07954 4544 aaKnown RBP2.35□□□□□ -2.03
SCARB2-218ENST00000639715 KRTAP10-12P60413 245 aa2.32□□□□□ -2.04
SCARB2-218ENST00000639715 SPRR2GQ9BYE4 73 aa2.32□□□□□ -2.04
SCARB2-218ENST00000639715 LCE3AQ5TA76 89 aa2.31□□□□□ -2.04
SCARB2-218ENST00000639715 KRTAP12-3P60328 96 aa2.29□□□□□ -2.04
SCARB2-218ENST00000639715 KRTAP20-1Q3LI63 56 aa2.28□□□□□ -2.04
SCARB2-218ENST00000639715 MT1HP80294 61 aa2.26□□□□□ -2.05
SCARB2-218ENST00000639715 LRP2P98164 4655 aa2.25□□□□□ -2.05
SCARB2-218ENST00000639715 MT2AP02795 61 aa2.25□□□□□ -2.05
SCARB2-218ENST00000639715 KRTAP4-8Q9BYQ9 185 aa2.23□□□□□ -2.05
SCARB2-218ENST00000639715 MT1FP04733 61 aa2.21□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP8-1Q8IUC2 63 aa2.21□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP19-1Q8IUB9 90 aa2.21□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP19-8Q3LI54 63 aa2.19□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP9-8Q9BYQ0 159 aa2.19□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP19-2Q3LHN2 52 aa2.19□□□□□ -2.06
SCARB2-218ENST00000639715 NEBP20929 6669 aa2.19□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP5-3Q6L8H2 238 aa2.17□□□□□ -2.06
SCARB2-218ENST00000639715 KRTAP19-6Q3LI70 58 aa2.13□□□□□ -2.07
SCARB2-218ENST00000639715 FLGP20930 4061 aaPredicted RBP2.12□□□□□ -2.07
SCARB2-218ENST00000639715 KRTAP19-4Q3LI73 84 aa2.12□□□□□ -2.07
SCARB2-218ENST00000639715 LPAP08519 4548 aa2.12□□□□□ -2.07
SCARB2-218ENST00000639715 KRTAP5-9P26371 169 aa2.1□□□□□ -2.07
SCARB2-218ENST00000639715 MT1BP07438 61 aa2.1□□□□□ -2.07
SCARB2-218ENST00000639715 MT1XP80297 61 aa2.1□□□□□ -2.07
SCARB2-218ENST00000639715 KRTAP10-5P60370 271 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms