RNA–Protein interactions for RNA: ENST00000639456.1

CROCCP2-204, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 2, humanhuman

TSL 5

Gene CROCCP2, Length 2,575 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2-204ENST00000639456 RYR3Q15413 4870 aa9.33□□□□□ -0.92
CROCCP2-204ENST00000639456 LINC01554Q52M75 96 aa9.33□□□□□ -0.92
CROCCP2-204ENST00000639456 KRTAP10-8P60410 259 aa9.24□□□□□ -0.93
CROCCP2-204ENST00000639456 LPAP08519 4548 aa9.24□□□□□ -0.93
CROCCP2-204ENST00000639456 Q5VSD8 79 aa9.23□□□□□ -0.93
CROCCP2-204ENST00000639456 CRIPTQ9P021 101 aa9.22□□□□□ -0.93
CROCCP2-204ENST00000639456 KRTAP3-3Q9BYR6 98 aa9.2□□□□□ -0.94
CROCCP2-204ENST00000639456 KRTAP17-1Q9BYP8 105 aa9.19□□□□□ -0.94
CROCCP2-204ENST00000639456 XP32Q5T750 250 aa9.18□□□□□ -0.94
CROCCP2-204ENST00000639456 KIAA1109Q2LD37 5005 aa9.16□□□□□ -0.94
CROCCP2-204ENST00000639456 RPL37P61927 97 aaKnown RBP9.16□□□□□ -0.94
CROCCP2-204ENST00000639456 A0A0D9SG42 100 aa9.14□□□□□ -0.95
CROCCP2-204ENST00000639456 KRTAP10-6P60371 365 aaPredicted RBP9.14□□□□□ -0.95
CROCCP2-204ENST00000639456 KRTAP13-4Q3LI77 160 aa9.14□□□□□ -0.95
CROCCP2-204ENST00000639456 RYR1P21817 5038 aa9.11□□□□□ -0.95
CROCCP2-204ENST00000639456 LRP2P98164 4655 aa9.1□□□□□ -0.95
CROCCP2-204ENST00000639456 KRTAP25-1Q3LHN0 102 aa9.07□□□□□ -0.96
CROCCP2-204ENST00000639456 S4R3F8 94 aa9.07□□□□□ -0.96
CROCCP2-204ENST00000639456 K7ERS5 55 aa9.06□□□□□ -0.96
CROCCP2-204ENST00000639456 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
CROCCP2-204ENST00000639456 P0C880 135 aa9.04□□□□□ -0.96
CROCCP2-204ENST00000639456 EPPK1P58107 5090 aaKnown RBP8.98□□□□□ -0.97
CROCCP2-204ENST00000639456 MT1HL1P0DM35 61 aa8.97□□□□□ -0.97
CROCCP2-204ENST00000639456 ABCA13Q86UQ4 5058 aa8.93□□□□□ -0.98
CROCCP2-204ENST00000639456 ROMO1P60602 79 aa8.9□□□□□ -0.98
CROCCP2-204ENST00000639456 KRTAP12-2P59991 146 aa8.82□□□□□ -1
CROCCP2-204ENST00000639456 C10orf95Q9H7T3 257 aa8.81□□□□□ -1
CROCCP2-204ENST00000639456 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
CROCCP2-204ENST00000639456 TPRXLQ17RH7 258 aa8.77□□□□□ -1
CROCCP2-204ENST00000639456 H3BS24 57 aa8.72□□□□□ -1.01
CROCCP2-204ENST00000639456 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
CROCCP2-204ENST00000639456 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
CROCCP2-204ENST00000639456 M0QZ58 72 aa8.54□□□□□ -1.04
CROCCP2-204ENST00000639456 MUC17Q685J3 4493 aa8.53□□□□□ -1.04
CROCCP2-204ENST00000639456 MUC2Q02817 5179 aa8.53□□□□□ -1.04
CROCCP2-204ENST00000639456 LORP23490 312 aaPredicted RBP8.48□□□□□ -1.05
CROCCP2-204ENST00000639456 R4GN34 69 aa8.47□□□□□ -1.05
CROCCP2-204ENST00000639456 BIRC6Q9NR09 4857 aa8.47□□□□□ -1.05
CROCCP2-204ENST00000639456 KRTAP4-1Q9BYQ7 146 aa8.46□□□□□ -1.05
CROCCP2-204ENST00000639456 HERC2O95714 4834 aa8.44□□□□□ -1.06
CROCCP2-204ENST00000639456 SEC61BP60468 96 aaKnown RBP8.37□□□□□ -1.07
CROCCP2-204ENST00000639456 J3QL48 77 aa8.32□□□□□ -1.08
CROCCP2-204ENST00000639456 KRTAP15-1Q3LI76 137 aa8.28□□□□□ -1.08
CROCCP2-204ENST00000639456 NDUFAF8A1L188 74 aa8.21□□□□□ -1.09
CROCCP2-204ENST00000639456 KRTAP19-2Q3LHN2 52 aa8.2□□□□□ -1.1
CROCCP2-204ENST00000639456 PCLOQ9Y6V0 5065 aa8.16□□□□□ -1.1
CROCCP2-204ENST00000639456 HERC1Q15751 4861 aa8.13□□□□□ -1.11
CROCCP2-204ENST00000639456 FAT4Q6V0I7 4981 aa8.07□□□□□ -1.12
CROCCP2-204ENST00000639456 CAMK2N1Q7Z7J9 78 aa8.07□□□□□ -1.12
CROCCP2-204ENST00000639456 FLGP20930 4061 aaPredicted RBP8.06□□□□□ -1.12
CROCCP2-204ENST00000639456 PLAC4Q8WY50 150 aa7.94□□□□□ -1.14
CROCCP2-204ENST00000639456 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
CROCCP2-204ENST00000639456 RNF213Q63HN8 5207 aa7.85□□□□□ -1.15
CROCCP2-204ENST00000639456 PP632Q6XCG6 107 aa7.73□□□□□ -1.17
CROCCP2-204ENST00000639456 LCE2CQ5TA81 110 aa7.71□□□□□ -1.18
CROCCP2-204ENST00000639456 UBR4Q5T4S7 5183 aa7.7□□□□□ -1.18
CROCCP2-204ENST00000639456 TNP1P09430 55 aa7.68□□□□□ -1.18
CROCCP2-204ENST00000639456 M0R2T5 61 aa7.65□□□□□ -1.18
CROCCP2-204ENST00000639456 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
CROCCP2-204ENST00000639456 LUZP6Q538Z0 58 aa7.55□□□□□ -1.2
CROCCP2-204ENST00000639456 SPRR2GQ9BYE4 73 aa7.53□□□□□ -1.2
CROCCP2-204ENST00000639456 MT1HP80294 61 aa7.51□□□□□ -1.21
CROCCP2-204ENST00000639456 KRTAP10-10P60014 251 aa7.46□□□□□ -1.22
CROCCP2-204ENST00000639456 MT1FP04733 61 aa7.45□□□□□ -1.22
CROCCP2-204ENST00000639456 MT2AP02795 61 aa7.4□□□□□ -1.22
CROCCP2-204ENST00000639456 KRTAP23-1A1A580 65 aa7.37□□□□□ -1.23
CROCCP2-204ENST00000639456 LCE3AQ5TA76 89 aa7.37□□□□□ -1.23
CROCCP2-204ENST00000639456 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
CROCCP2-204ENST00000639456 SPRR5A0A1B0GTR4 108 aa7.27□□□□□ -1.25
CROCCP2-204ENST00000639456 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
CROCCP2-204ENST00000639456 MT1BP07438 61 aa7.17□□□□□ -1.26
CROCCP2-204ENST00000639456 KRTAP10-5P60370 271 aa7.15□□□□□ -1.26
CROCCP2-204ENST00000639456 KRTAP19-8Q3LI54 63 aa7.14□□□□□ -1.27
CROCCP2-204ENST00000639456 MT1XP80297 61 aa7.14□□□□□ -1.27
CROCCP2-204ENST00000639456 USH2AO75445 5202 aa7.07□□□□□ -1.28
CROCCP2-204ENST00000639456 KRTAP8-1Q8IUC2 63 aa7.05□□□□□ -1.28
CROCCP2-204ENST00000639456 KRTAP10-7P60409 375 aaPredicted RBP7.03□□□□□ -1.28
CROCCP2-204ENST00000639456 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
CROCCP2-204ENST00000639456 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
CROCCP2-204ENST00000639456 KMT2DO14686 5537 aa6.98□□□□□ -1.29
CROCCP2-204ENST00000639456 KRTAP12-3P60328 96 aa6.96□□□□□ -1.29
CROCCP2-204ENST00000639456 LCE2AQ5TA79 106 aaPredicted RBP6.83□□□□□ -1.32
CROCCP2-204ENST00000639456 LCE2BO14633 110 aa6.79□□□□□ -1.32
CROCCP2-204ENST00000639456 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
CROCCP2-204ENST00000639456 KRTAP19-5Q3LI72 72 aa6.7□□□□□ -1.34
CROCCP2-204ENST00000639456 KRTAP4-8A0A0G2JLE6 195 aa6.66□□□□□ -1.34
CROCCP2-204ENST00000639456 LCE2DQ5TA82 110 aaPredicted RBP6.66□□□□□ -1.34
CROCCP2-204ENST00000639456 KRTAP4-8Q9BYQ9 185 aa6.66□□□□□ -1.34
CROCCP2-204ENST00000639456 LCE3CQ5T5A8 94 aa6.54□□□□□ -1.36
CROCCP2-204ENST00000639456 FSIP2Q5CZC0 6907 aa6.47□□□□□ -1.37
CROCCP2-204ENST00000639456 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
CROCCP2-204ENST00000639456 KRTAP9-6A8MVA2 160 aa6.42□□□□□ -1.38
CROCCP2-204ENST00000639456 INE1O15225 51 aa6.36□□□□□ -1.39
CROCCP2-204ENST00000639456 KRTAP19-7Q3SYF9 63 aa6.36□□□□□ -1.39
CROCCP2-204ENST00000639456 SSPOA2VEC9 5147 aa6.29□□□□□ -1.4
CROCCP2-204ENST00000639456 MT1LQ93083 61 aa6.16□□□□□ -1.42
CROCCP2-204ENST00000639456 MT1EP04732 61 aa6.14□□□□□ -1.43
CROCCP2-204ENST00000639456 MUC12Q9UKN1 5478 aa6.1□□□□□ -1.43
CROCCP2-204ENST00000639456 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
CROCCP2-204ENST00000639456 KRTAP19-6Q3LI70 58 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms