RNA–Protein interactions for RNA: ENST00000638488.1

GFAP-228, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 2,641 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-228ENST00000638488 TPRXLQ17RH7 258 aa6.53□□□□□ -1.36
GFAP-228ENST00000638488 FAT1Q14517 4588 aa6.51□□□□□ -1.37
GFAP-228ENST00000638488 KMT2CQ8NEZ4 4911 aaKnown RBP6.5□□□□□ -1.37
GFAP-228ENST00000638488 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
GFAP-228ENST00000638488 KRTAP3-1Q9BYR8 98 aa6.47□□□□□ -1.37
GFAP-228ENST00000638488 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
GFAP-228ENST00000638488 RYR2Q92736 4967 aa6.46□□□□□ -1.38
GFAP-228ENST00000638488 KRTAP10-4P60372 401 aaPredicted RBP6.44□□□□□ -1.38
GFAP-228ENST00000638488 C9orf92A6NGG3 77 aa6.43□□□□□ -1.38
GFAP-228ENST00000638488 RPS29P62273 56 aaKnown RBP6.37□□□□□ -1.39
GFAP-228ENST00000638488 C10orf95Q9H7T3 257 aa6.37□□□□□ -1.39
GFAP-228ENST00000638488 SEC61BP60468 96 aaKnown RBP6.34□□□□□ -1.39
GFAP-228ENST00000638488 Q5VSD8 79 aa6.32□□□□□ -1.4
GFAP-228ENST00000638488 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
GFAP-228ENST00000638488 KRTAP13-4Q3LI77 160 aa6.3□□□□□ -1.4
GFAP-228ENST00000638488 RYR3Q15413 4870 aa6.29□□□□□ -1.4
GFAP-228ENST00000638488 PKHD1L1Q86WI1 4243 aa6.29□□□□□ -1.4
GFAP-228ENST00000638488 LRP1Q07954 4544 aaKnown RBP6.29□□□□□ -1.4
GFAP-228ENST00000638488 A0A0D9SG42 100 aa6.28□□□□□ -1.4
GFAP-228ENST00000638488 LUZP6Q538Z0 58 aa6.25□□□□□ -1.41
GFAP-228ENST00000638488 HSPG2P98160 4391 aa6.24□□□□□ -1.41
GFAP-228ENST00000638488 S4R3F8 94 aa6.24□□□□□ -1.41
GFAP-228ENST00000638488 KRTAP17-1Q9BYP8 105 aa6.23□□□□□ -1.41
GFAP-228ENST00000638488 KRTAP10-8P60410 259 aa6.2□□□□□ -1.42
GFAP-228ENST00000638488 DMBT1Q9UGM3 2413 aaPredicted RBP6.2□□□□□ -1.42
GFAP-228ENST00000638488 XP32Q5T750 250 aa6.19□□□□□ -1.42
GFAP-228ENST00000638488 TNXBP22105 4242 aa6.18□□□□□ -1.42
GFAP-228ENST00000638488 KIAA1109Q2LD37 5005 aa6.16□□□□□ -1.42
GFAP-228ENST00000638488 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
GFAP-228ENST00000638488 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.43
GFAP-228ENST00000638488 RYR1P21817 5038 aa6.14□□□□□ -1.43
GFAP-228ENST00000638488 MYCBP2O75592 4640 aa6.13□□□□□ -1.43
GFAP-228ENST00000638488 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
GFAP-228ENST00000638488 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.44
GFAP-228ENST00000638488 LCE2BO14633 110 aa6.08□□□□□ -1.44
GFAP-228ENST00000638488 MT1HL1P0DM35 61 aa6.07□□□□□ -1.44
GFAP-228ENST00000638488 PLAC4Q8WY50 150 aa6□□□□□ -1.45
GFAP-228ENST00000638488 KRTAP4-5Q9BYR2 181 aa5.99□□□□□ -1.45
GFAP-228ENST00000638488 M0QZ58 72 aa5.96□□□□□ -1.46
GFAP-228ENST00000638488 LPAP08519 4548 aa5.91□□□□□ -1.46
GFAP-228ENST00000638488 ABCA13Q86UQ4 5058 aa5.89□□□□□ -1.47
GFAP-228ENST00000638488 LCE2CQ5TA81 110 aa5.88□□□□□ -1.47
GFAP-228ENST00000638488 LRP2P98164 4655 aa5.88□□□□□ -1.47
GFAP-228ENST00000638488 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
GFAP-228ENST00000638488 LCE2AQ5TA79 106 aaPredicted RBP5.74□□□□□ -1.49
GFAP-228ENST00000638488 HERC2O95714 4834 aa5.7□□□□□ -1.5
GFAP-228ENST00000638488 CAMK2N1Q7Z7J9 78 aa5.66□□□□□ -1.5
GFAP-228ENST00000638488 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
GFAP-228ENST00000638488 R4GN34 69 aa5.63□□□□□ -1.51
GFAP-228ENST00000638488 BIRC6Q9NR09 4857 aa5.58□□□□□ -1.52
GFAP-228ENST00000638488 MUC17Q685J3 4493 aa5.57□□□□□ -1.52
GFAP-228ENST00000638488 SPRR5A0A1B0GTR4 108 aa5.57□□□□□ -1.52
GFAP-228ENST00000638488 PRO2289Q9P1D8 64 aa5.54□□□□□ -1.52
GFAP-228ENST00000638488 MUC2Q02817 5179 aa5.54□□□□□ -1.52
GFAP-228ENST00000638488 LORP23490 312 aaPredicted RBP5.5□□□□□ -1.53
GFAP-228ENST00000638488 PCLOQ9Y6V0 5065 aa5.47□□□□□ -1.53
GFAP-228ENST00000638488 HERC1Q15751 4861 aa5.47□□□□□ -1.53
GFAP-228ENST00000638488 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
GFAP-228ENST00000638488 KRTAP19-2Q3LHN2 52 aa5.43□□□□□ -1.54
GFAP-228ENST00000638488 INE1O15225 51 aa5.38□□□□□ -1.55
GFAP-228ENST00000638488 HMCN2Q8NDA2 5059 aa5.34□□□□□ -1.55
GFAP-228ENST00000638488 TNP1P09430 55 aa5.31□□□□□ -1.56
GFAP-228ENST00000638488 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
GFAP-228ENST00000638488 FLGP20930 4061 aaPredicted RBP5.25□□□□□ -1.57
GFAP-228ENST00000638488 RNF213Q63HN8 5207 aa5.21□□□□□ -1.58
GFAP-228ENST00000638488 M0R2T5 61 aa5.21□□□□□ -1.58
GFAP-228ENST00000638488 UBR4Q5T4S7 5183 aa5.2□□□□□ -1.58
GFAP-228ENST00000638488 MT1HP80294 61 aa5.1□□□□□ -1.59
GFAP-228ENST00000638488 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
GFAP-228ENST00000638488 MT1FP04733 61 aa4.98□□□□□ -1.61
GFAP-228ENST00000638488 KRTAP19-1Q8IUB9 90 aa4.98□□□□□ -1.61
GFAP-228ENST00000638488 MT2AP02795 61 aa4.97□□□□□ -1.61
GFAP-228ENST00000638488 SPRR2GQ9BYE4 73 aa4.96□□□□□ -1.62
GFAP-228ENST00000638488 KRTAP9-8Q9BYQ0 159 aa4.94□□□□□ -1.62
GFAP-228ENST00000638488 LCE3AQ5TA76 89 aa4.92□□□□□ -1.62
GFAP-228ENST00000638488 KRTAP8-1Q8IUC2 63 aa4.86□□□□□ -1.63
GFAP-228ENST00000638488 KRTAP19-8Q3LI54 63 aa4.76□□□□□ -1.65
GFAP-228ENST00000638488 MT1BP07438 61 aa4.75□□□□□ -1.65
GFAP-228ENST00000638488 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
GFAP-228ENST00000638488 KRTAP9-3Q9BYQ3 159 aa4.73□□□□□ -1.65
GFAP-228ENST00000638488 KRTAP12-3P60328 96 aa4.68□□□□□ -1.66
GFAP-228ENST00000638488 KRTAP10-5P60370 271 aa4.68□□□□□ -1.66
GFAP-228ENST00000638488 MT1XP80297 61 aa4.67□□□□□ -1.66
GFAP-228ENST00000638488 USH2AO75445 5202 aa4.6□□□□□ -1.67
GFAP-228ENST00000638488 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
GFAP-228ENST00000638488 LCE3CQ5T5A8 94 aa4.45□□□□□ -1.7
GFAP-228ENST00000638488 KMT2DO14686 5537 aa4.42□□□□□ -1.7
GFAP-228ENST00000638488 KRTAP2-3P0C7H8 128 aa4.42□□□□□ -1.7
GFAP-228ENST00000638488 KRTAP2-4Q9BYR9 128 aa4.42□□□□□ -1.7
GFAP-228ENST00000638488 KRTAP2-1Q9BYU5 128 aa4.42□□□□□ -1.7
GFAP-228ENST00000638488 KRTAP4-8A0A0G2JLE6 195 aa4.36□□□□□ -1.71
GFAP-228ENST00000638488 KRTAP4-8Q9BYQ9 185 aa4.36□□□□□ -1.71
GFAP-228ENST00000638488 KRTAP19-5Q3LI72 72 aa4.34□□□□□ -1.71
GFAP-228ENST00000638488 FSIP2Q5CZC0 6907 aa4.33□□□□□ -1.72
GFAP-228ENST00000638488 KRTAP9-6A8MVA2 160 aa4.29□□□□□ -1.72
GFAP-228ENST00000638488 SSPOA2VEC9 5147 aa4.22□□□□□ -1.73
GFAP-228ENST00000638488 LCE4AQ5TA78 99 aa4.21□□□□□ -1.74
GFAP-228ENST00000638488 KRTAP19-7Q3SYF9 63 aa4.16□□□□□ -1.74
GFAP-228ENST00000638488 KRTAP19-4Q3LI73 84 aa4.16□□□□□ -1.74
GFAP-228ENST00000638488 KRTAP19-6Q3LI70 58 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms