RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 A6NN06 94 aa3.21□□□□□ -1.9
SCARB2-207ENST00000638295 RYR2Q92736 4967 aa3.19□□□□□ -1.9
SCARB2-207ENST00000638295 STARD9Q9P2P6 4700 aa3.19□□□□□ -1.9
SCARB2-207ENST00000638295 VPS13DQ5THJ4 4388 aa3.19□□□□□ -1.9
SCARB2-207ENST00000638295 DYNC2H1Q8NCM8 4307 aaKnown RBP3.19□□□□□ -1.9
SCARB2-207ENST00000638295 HERC2O95714 4834 aa3.16□□□□□ -1.9
SCARB2-207ENST00000638295 LRP1BQ9NZR2 4599 aa3.14□□□□□ -1.91
SCARB2-207ENST00000638295 C10orf95Q9H7T3 257 aa3.13□□□□□ -1.91
SCARB2-207ENST00000638295 KRTAP3-1Q9BYR8 98 aa3.11□□□□□ -1.91
SCARB2-207ENST00000638295 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
SCARB2-207ENST00000638295 FAT2Q9NYQ8 4349 aa3.1□□□□□ -1.91
SCARB2-207ENST00000638295 KRTAP13-4Q3LI77 160 aa3.09□□□□□ -1.91
SCARB2-207ENST00000638295 LCE2DQ5TA82 110 aaPredicted RBP3.09□□□□□ -1.91
SCARB2-207ENST00000638295 HYDINQ4G0P3 5121 aa3.09□□□□□ -1.91
SCARB2-207ENST00000638295 FAT1Q14517 4588 aa3.09□□□□□ -1.91
SCARB2-207ENST00000638295 DNAH17Q9UFH2 4485 aa3.07□□□□□ -1.92
SCARB2-207ENST00000638295 DNAH3Q8TD57 4116 aa3.07□□□□□ -1.92
SCARB2-207ENST00000638295 KMT2CQ8NEZ4 4911 aaKnown RBP3.06□□□□□ -1.92
SCARB2-207ENST00000638295 NDUFAF8A1L188 74 aa3.05□□□□□ -1.92
SCARB2-207ENST00000638295 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
SCARB2-207ENST00000638295 MT1HP80294 61 aa3.03□□□□□ -1.92
SCARB2-207ENST00000638295 KRTAP12-2P59991 146 aa3.02□□□□□ -1.93
SCARB2-207ENST00000638295 KRTAP10-6P60371 365 aaPredicted RBP3.02□□□□□ -1.93
SCARB2-207ENST00000638295 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
SCARB2-207ENST00000638295 DNAH6Q9C0G6 4158 aa3□□□□□ -1.93
SCARB2-207ENST00000638295 APOBP04114 4563 aaKnown RBP3□□□□□ -1.93
SCARB2-207ENST00000638295 PCLOQ9Y6V0 5065 aa3□□□□□ -1.93
SCARB2-207ENST00000638295 CMYA5Q8N3K9 4069 aa2.99□□□□□ -1.93
SCARB2-207ENST00000638295 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
SCARB2-207ENST00000638295 KMT2AQ03164 3969 aa2.98□□□□□ -1.93
SCARB2-207ENST00000638295 CSMD3Q7Z407 3707 aa2.98□□□□□ -1.93
SCARB2-207ENST00000638295 EPPK1P58107 5090 aaKnown RBP2.97□□□□□ -1.93
SCARB2-207ENST00000638295 KRTAP3-3Q9BYR6 98 aa2.94□□□□□ -1.94
SCARB2-207ENST00000638295 DNAH7Q8WXX0 4024 aa2.94□□□□□ -1.94
SCARB2-207ENST00000638295 HERC1Q15751 4861 aa2.94□□□□□ -1.94
SCARB2-207ENST00000638295 LYSTQ99698 3801 aa2.93□□□□□ -1.94
SCARB2-207ENST00000638295 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
SCARB2-207ENST00000638295 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
SCARB2-207ENST00000638295 KRTAP15-1Q3LI76 137 aa2.92□□□□□ -1.94
SCARB2-207ENST00000638295 KRTAP3-2Q9BYR7 98 aa2.92□□□□□ -1.94
SCARB2-207ENST00000638295 VPS13BQ7Z7G8 4022 aa2.91□□□□□ -1.94
SCARB2-207ENST00000638295 MT2AP02795 61 aa2.91□□□□□ -1.94
SCARB2-207ENST00000638295 HSPG2P98160 4391 aa2.9□□□□□ -1.94
SCARB2-207ENST00000638295 DNAH8Q96JB1 4490 aa2.9□□□□□ -1.95
SCARB2-207ENST00000638295 LORP23490 312 aaPredicted RBP2.9□□□□□ -1.95
SCARB2-207ENST00000638295 KRTAP9-2Q9BYQ4 174 aa2.88□□□□□ -1.95
SCARB2-207ENST00000638295 CRCT1Q9UGL9 99 aa2.88□□□□□ -1.95
SCARB2-207ENST00000638295 KRTAP23-1A1A580 65 aa2.87□□□□□ -1.95
SCARB2-207ENST00000638295 LRP1Q07954 4544 aaKnown RBP2.86□□□□□ -1.95
SCARB2-207ENST00000638295 FAT3Q8TDW7 4589 aa2.86□□□□□ -1.95
SCARB2-207ENST00000638295 MYCBP2O75592 4640 aa2.84□□□□□ -1.95
SCARB2-207ENST00000638295 KRTAP9-6A0A140TA67 174 aa2.83□□□□□ -1.96
SCARB2-207ENST00000638295 PKHD1L1Q86WI1 4243 aa2.83□□□□□ -1.96
SCARB2-207ENST00000638295 MT1FP04733 61 aa2.83□□□□□ -1.96
SCARB2-207ENST00000638295 KRTAP8-1Q8IUC2 63 aa2.82□□□□□ -1.96
SCARB2-207ENST00000638295 LRP2P98164 4655 aa2.82□□□□□ -1.96
SCARB2-207ENST00000638295 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
SCARB2-207ENST00000638295 KRTAP12-3P60328 96 aa2.8□□□□□ -1.96
SCARB2-207ENST00000638295 UBR4Q5T4S7 5183 aa2.78□□□□□ -1.97
SCARB2-207ENST00000638295 SPRR2GQ9BYE4 73 aa2.78□□□□□ -1.97
SCARB2-207ENST00000638295 LCE2CQ5TA81 110 aa2.76□□□□□ -1.97
SCARB2-207ENST00000638295 PKD1P98161 4303 aa2.75□□□□□ -1.97
SCARB2-207ENST00000638295 HECTD4Q9Y4D8 3996 aa2.75□□□□□ -1.97
SCARB2-207ENST00000638295 LCE2AQ5TA79 106 aaPredicted RBP2.75□□□□□ -1.97
SCARB2-207ENST00000638295 RNF213Q63HN8 5207 aa2.73□□□□□ -1.97
SCARB2-207ENST00000638295 FRAS1Q86XX4 4008 aa2.72□□□□□ -1.97
SCARB2-207ENST00000638295 SPRR2FQ96RM1 72 aa2.72□□□□□ -1.97
SCARB2-207ENST00000638295 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
SCARB2-207ENST00000638295 KRTAP9-8Q9BYQ0 159 aa2.71□□□□□ -1.98
SCARB2-207ENST00000638295 KRTAP19-4Q3LI73 84 aa2.7□□□□□ -1.98
SCARB2-207ENST00000638295 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
SCARB2-207ENST00000638295 HMCN2Q8NDA2 5059 aa2.66□□□□□ -1.98
SCARB2-207ENST00000638295 KRTAP9-3Q9BYQ3 159 aa2.65□□□□□ -1.98
SCARB2-207ENST00000638295 KRTAP19-8Q3LI54 63 aa2.65□□□□□ -1.99
SCARB2-207ENST00000638295 KRTAP19-2Q3LHN2 52 aa2.64□□□□□ -1.99
SCARB2-207ENST00000638295 KRTAP10-5P60370 271 aa2.63□□□□□ -1.99
SCARB2-207ENST00000638295 SPRR2EP22531 72 aa2.63□□□□□ -1.99
SCARB2-207ENST00000638295 SPRR2BP35325 72 aa2.63□□□□□ -1.99
SCARB2-207ENST00000638295 SPRR2AP35326 72 aa2.63□□□□□ -1.99
SCARB2-207ENST00000638295 FAT4Q6V0I7 4981 aa2.61□□□□□ -1.99
SCARB2-207ENST00000638295 KRTAP9-7A8MTY7 169 aa2.6□□□□□ -1.99
SCARB2-207ENST00000638295 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -1.99
SCARB2-207ENST00000638295 FSIP2Q5CZC0 6907 aa2.58□□□□□ -2
SCARB2-207ENST00000638295 LCE2BO14633 110 aa2.58□□□□□ -2
SCARB2-207ENST00000638295 INE1O15225 51 aa2.58□□□□□ -2
SCARB2-207ENST00000638295 KRTAP19-6Q3LI70 58 aa2.57□□□□□ -2
SCARB2-207ENST00000638295 SPRR2DP22532 72 aa2.56□□□□□ -2
SCARB2-207ENST00000638295 MT1BP07438 61 aa2.55□□□□□ -2
SCARB2-207ENST00000638295 LPAP08519 4548 aa2.55□□□□□ -2
SCARB2-207ENST00000638295 TNXBP22105 4242 aa2.53□□□□□ -2.01
SCARB2-207ENST00000638295 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.51□□□□□ -2.01
SCARB2-207ENST00000638295 KRTAP19-5Q3LI72 72 aa2.5□□□□□ -2.01
SCARB2-207ENST00000638295 KRTAP6-3Q3LI67 103 aa2.47□□□□□ -2.01
SCARB2-207ENST00000638295 MUC17Q685J3 4493 aa2.46□□□□□ -2.02
SCARB2-207ENST00000638295 MT1XP80297 61 aa2.46□□□□□ -2.02
SCARB2-207ENST00000638295 FLGP20930 4061 aaPredicted RBP2.46□□□□□ -2.02
SCARB2-207ENST00000638295 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
SCARB2-207ENST00000638295 LCE3CQ5T5A8 94 aa2.44□□□□□ -2.02
SCARB2-207ENST00000638295 MT1GP13640 62 aa2.42□□□□□ -2.02
SCARB2-207ENST00000638295 KRTAP12-4P60329 112 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms