RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 FASNP49327 2511 aaKnown RBP0.87□□□□□ -2.27
SYNGAP1-221ENST00000637490 HIVEP1P15822 2718 aa0.87□□□□□ -2.27
SYNGAP1-221ENST00000637490 MYO15AQ9UKN7 3530 aa0.86□□□□□ -2.27
SYNGAP1-221ENST00000637490 CMYA5Q8N3K9 4069 aa0.86□□□□□ -2.27
SYNGAP1-221ENST00000637490 FLNCQ14315 2725 aa0.86□□□□□ -2.27
SYNGAP1-221ENST00000637490 LCE3CQ5T5A8 94 aa0.86□□□□□ -2.27
SYNGAP1-221ENST00000637490 LCE1DQ5T752 114 aa0.86□□□□□ -2.27
SYNGAP1-221ENST00000637490 MACF1Q9UPN3 7388 aaKnown RBP0.86□□□□□ -2.27
SYNGAP1-221ENST00000637490 CEP295Q9C0D2 2601 aa0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 LYSTQ99698 3801 aa0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 CSMD2Q7Z408 3487 aa0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 SMR3BP02814 79 aaPredicted RBP0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 KRTAP10-7P60409 375 aaPredicted RBP0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 ANK2Q01484 3957 aa0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 DNAH8Q96JB1 4490 aa0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 DNAH1Q9P2D7 4330 aa0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 POLQO75417 2590 aa0.85□□□□□ -2.27
SYNGAP1-221ENST00000637490 ATRQ13535 2644 aa0.84□□□□□ -2.27
SYNGAP1-221ENST00000637490 DNAH3Q8TD57 4116 aa0.84□□□□□ -2.28
SYNGAP1-221ENST00000637490 MYO18BQ8IUG5 2567 aa0.83□□□□□ -2.28
SYNGAP1-221ENST00000637490 STAB1Q9NY15 2570 aa0.83□□□□□ -2.28
SYNGAP1-221ENST00000637490 ANK3Q12955 4377 aaKnown RBP0.82□□□□□ -2.28
SYNGAP1-221ENST00000637490 ANKRD11Q6UB99 2663 aaPredicted RBP0.82□□□□□ -2.28
SYNGAP1-221ENST00000637490 PRKDCP78527 4128 aaKnown RBP0.82□□□□□ -2.28
SYNGAP1-221ENST00000637490 NOTCH2Q04721 2471 aa0.82□□□□□ -2.28
SYNGAP1-221ENST00000637490 KMT2AQ03164 3969 aa0.82□□□□□ -2.28
SYNGAP1-221ENST00000637490 MUC5BQ9HC84 5762 aaPredicted RBP0.82□□□□□ -2.28
SYNGAP1-221ENST00000637490 CUBNO60494 3623 aa0.82□□□□□ -2.28
SYNGAP1-221ENST00000637490 DNAH6Q9C0G6 4158 aa0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 HECTD4Q9Y4D8 3996 aa0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 FLNAP21333 2647 aaKnown RBP0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 SACSQ9NZJ4 4579 aa0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 VPS13CQ709C8 3753 aa0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 NSD1Q96L73 2696 aaPredicted RBP0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 SVEP1Q4LDE5 3571 aa0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 HMCN1Q96RW7 5635 aa0.81□□□□□ -2.28
SYNGAP1-221ENST00000637490 MGAM2Q2M2H8 2515 aa0.8□□□□□ -2.28
SYNGAP1-221ENST00000637490 FLGP20930 4061 aaPredicted RBP0.8□□□□□ -2.28
SYNGAP1-221ENST00000637490 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
SYNGAP1-221ENST00000637490 KRTAP19-5Q3LI72 72 aa0.8□□□□□ -2.28
SYNGAP1-221ENST00000637490 KRTAP4-4Q9BYR3 166 aa0.8□□□□□ -2.28
SYNGAP1-221ENST00000637490 HUWE1Q7Z6Z7 4374 aaKnown RBP0.8□□□□□ -2.28
SYNGAP1-221ENST00000637490 ACACBO00763 2458 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 PRM1P04553 51 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 KRTAP21-3Q3LHN1 58 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 SPRR2GQ9BYE4 73 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 DYNC2H1Q8NCM8 4307 aaKnown RBP0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 IGSF10Q6WRI0 2623 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 DNAH9Q9NYC9 4486 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 ZNF469Q96JG9 3925 aaPredicted RBP0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 VPS13BQ7Z7G8 4022 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 DNAH7Q8WXX0 4024 aa0.79□□□□□ -2.28
SYNGAP1-221ENST00000637490 DNAH2Q9P225 4427 aa0.78□□□□□ -2.28
SYNGAP1-221ENST00000637490 DNAH17Q9UFH2 4485 aa0.78□□□□□ -2.28
SYNGAP1-221ENST00000637490 KRTAP9-6A8MVA2 160 aa0.78□□□□□ -2.28
SYNGAP1-221ENST00000637490 KRTAP9-9Q9BYP9 154 aa0.78□□□□□ -2.28
SYNGAP1-221ENST00000637490 DNAH10Q8IVF4 4471 aa0.77□□□□□ -2.29
SYNGAP1-221ENST00000637490 PKD1P98161 4303 aa0.76□□□□□ -2.29
SYNGAP1-221ENST00000637490 MT1AP04731 61 aa0.76□□□□□ -2.29
SYNGAP1-221ENST00000637490 KRTAP9-2Q9BYQ4 174 aa0.76□□□□□ -2.29
SYNGAP1-221ENST00000637490 HSPG2P98160 4391 aa0.76□□□□□ -2.29
SYNGAP1-221ENST00000637490 TNXBP22105 4242 aa0.75□□□□□ -2.29
SYNGAP1-221ENST00000637490 KRTAP9-7A8MTY7 169 aa0.75□□□□□ -2.29
SYNGAP1-221ENST00000637490 LCE3EQ5T5B0 92 aa0.75□□□□□ -2.29
SYNGAP1-221ENST00000637490 MAST4O15021 2626 aa0.75□□□□□ -2.29
SYNGAP1-221ENST00000637490 TENM1Q9UKZ4 2725 aa0.74□□□□□ -2.29
SYNGAP1-221ENST00000637490 KRTAP4-2Q9BYR5 136 aa0.74□□□□□ -2.29
SYNGAP1-221ENST00000637490 CRCT1Q9UGL9 99 aa0.74□□□□□ -2.29
SYNGAP1-221ENST00000637490 FAT3Q8TDW7 4589 aa0.74□□□□□ -2.29
SYNGAP1-221ENST00000637490 FLNBO75369 2602 aaKnown RBP0.74□□□□□ -2.29
SYNGAP1-221ENST00000637490 NEBP20929 6669 aa0.74□□□□□ -2.29
SYNGAP1-221ENST00000637490 APOBP04114 4563 aaKnown RBP0.73□□□□□ -2.29
SYNGAP1-221ENST00000637490 KRTAP5-5Q701N2 237 aaPredicted RBP0.73□□□□□ -2.29
SYNGAP1-221ENST00000637490 KRTAP9-3Q9BYQ3 159 aa0.73□□□□□ -2.29
SYNGAP1-221ENST00000637490 PKHD1L1Q86WI1 4243 aa0.72□□□□□ -2.29
SYNGAP1-221ENST00000637490 KRTAP19-8Q3LI54 63 aa0.72□□□□□ -2.29
SYNGAP1-221ENST00000637490 LCE3DQ9BYE3 92 aa0.72□□□□□ -2.29
SYNGAP1-221ENST00000637490 AHNAK2Q8IVF2 5795 aa0.72□□□□□ -2.29
SYNGAP1-221ENST00000637490 PKHD1P08F94 4074 aa0.71□□□□□ -2.3
SYNGAP1-221ENST00000637490 STARD9Q9P2P6 4700 aa0.71□□□□□ -2.3
SYNGAP1-221ENST00000637490 SYNE2Q8WXH0 6885 aaKnown RBP0.71□□□□□ -2.3
SYNGAP1-221ENST00000637490 LRP1Q07954 4544 aaKnown RBP0.71□□□□□ -2.3
SYNGAP1-221ENST00000637490 MT1XP80297 61 aa0.71□□□□□ -2.3
SYNGAP1-221ENST00000637490 KRTAP19-2Q3LHN2 52 aa0.71□□□□□ -2.3
SYNGAP1-221ENST00000637490 KRTAP19-1Q8IUB9 90 aa0.71□□□□□ -2.3
SYNGAP1-221ENST00000637490 MT1EP04732 61 aa0.7□□□□□ -2.3
SYNGAP1-221ENST00000637490 DNAH5Q8TE73 4624 aa0.69□□□□□ -2.3
SYNGAP1-221ENST00000637490 LCE4AQ5TA78 99 aa0.69□□□□□ -2.3
SYNGAP1-221ENST00000637490 FAT2Q9NYQ8 4349 aa0.69□□□□□ -2.3
SYNGAP1-221ENST00000637490 SPRR2BP35325 72 aa0.68□□□□□ -2.3
SYNGAP1-221ENST00000637490 SPRR2AP35326 72 aa0.68□□□□□ -2.3
SYNGAP1-221ENST00000637490 DSTQ03001 7570 aaKnown RBP0.68□□□□□ -2.3
SYNGAP1-221ENST00000637490 MT1LQ93083 61 aa0.68□□□□□ -2.3
SYNGAP1-221ENST00000637490 SPRR2FQ96RM1 72 aa0.68□□□□□ -2.3
SYNGAP1-221ENST00000637490 PLECQ15149 4684 aaKnown RBP0.67□□□□□ -2.3
SYNGAP1-221ENST00000637490 FSIP2Q5CZC0 6907 aa0.67□□□□□ -2.3
SYNGAP1-221ENST00000637490 SPRR2DP22532 72 aa0.67□□□□□ -2.3
SYNGAP1-221ENST00000637490 KRTAP6-2Q3LI66 62 aa0.67□□□□□ -2.3
SYNGAP1-221ENST00000637490 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.66□□□□□ -2.3
SYNGAP1-221ENST00000637490 DYNC1H1Q14204 4646 aaKnown RBP0.65□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms