RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 SYNE2Q8WXH0 6885 aaKnown RBP6.23□□□□□ -1.41
PNKP-228ENST00000637325 MP68P56378 58 aa6.21□□□□□ -1.42
PNKP-228ENST00000637325 Q5VV11 94 aa6.21□□□□□ -1.42
PNKP-228ENST00000637325 LINC00208Q96KT6 92 aa6.21□□□□□ -1.42
PNKP-228ENST00000637325 NDUFC1O43677 76 aa6.2□□□□□ -1.42
PNKP-228ENST00000637325 SPRR2GQ9BYE4 73 aa6.2□□□□□ -1.42
PNKP-228ENST00000637325 J3QR89 54 aa6.19□□□□□ -1.42
PNKP-228ENST00000637325 IMUPQ9GZP8 106 aa6.19□□□□□ -1.42
PNKP-228ENST00000637325 A8MUN3 132 aa6.17□□□□□ -1.42
PNKP-228ENST00000637325 KRTAP19-8Q3LI54 63 aa6.16□□□□□ -1.42
PNKP-228ENST00000637325 OCR1Q9BZK8 76 aa6.16□□□□□ -1.42
PNKP-228ENST00000637325 CRIPTQ9P021 101 aa6.16□□□□□ -1.42
PNKP-228ENST00000637325 A6NN06 94 aa6.15□□□□□ -1.42
PNKP-228ENST00000637325 MT1BP07438 61 aa6.15□□□□□ -1.42
PNKP-228ENST00000637325 SCGB1A1P11684 91 aa6.12□□□□□ -1.43
PNKP-228ENST00000637325 H0YAA0 97 aa6.09□□□□□ -1.43
PNKP-228ENST00000637325 H3BPC8 53 aa6.09□□□□□ -1.43
PNKP-228ENST00000637325 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
PNKP-228ENST00000637325 KRTAP6-3Q3LI67 103 aa6.06□□□□□ -1.44
PNKP-228ENST00000637325 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
PNKP-228ENST00000637325 DMAC1Q96GE9 116 aa5.98□□□□□ -1.45
PNKP-228ENST00000637325 C20orf197Q8N268 126 aa5.95□□□□□ -1.46
PNKP-228ENST00000637325 MT-ATP8P03928 68 aa5.94□□□□□ -1.46
PNKP-228ENST00000637325 K7ERU9 68 aa5.93□□□□□ -1.46
PNKP-228ENST00000637325 R4GN34 69 aa5.93□□□□□ -1.46
PNKP-228ENST00000637325 SMIM20Q8N5G0 67 aa5.92□□□□□ -1.46
PNKP-228ENST00000637325 TRAV7A0A075B6U4 112 aa5.91□□□□□ -1.46
PNKP-228ENST00000637325 P0C880 135 aa5.9□□□□□ -1.46
PNKP-228ENST00000637325 PLAC4Q8WY50 150 aa5.9□□□□□ -1.46
PNKP-228ENST00000637325 ACYP2P14621 99 aa5.89□□□□□ -1.47
PNKP-228ENST00000637325 M0QZ58 72 aa5.88□□□□□ -1.47
PNKP-228ENST00000637325 PRO2289Q9P1D8 64 aa5.87□□□□□ -1.47
PNKP-228ENST00000637325 NEBP20929 6669 aa5.86□□□□□ -1.47
PNKP-228ENST00000637325 MUC12Q9UKN1 5478 aa5.85□□□□□ -1.47
PNKP-228ENST00000637325 SPTSSBQ8NFR3 76 aa5.84□□□□□ -1.47
PNKP-228ENST00000637325 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
PNKP-228ENST00000637325 CHKB-CPT1BH3BT56 60 aa5.81□□□□□ -1.48
PNKP-228ENST00000637325 LINC01554Q52M75 96 aa5.81□□□□□ -1.48
PNKP-228ENST00000637325 SNURFQ9Y675 71 aa5.79□□□□□ -1.48
PNKP-228ENST00000637325 MT1XP80297 61 aa5.78□□□□□ -1.48
PNKP-228ENST00000637325 KRTAP5-9P26371 169 aa5.77□□□□□ -1.49
PNKP-228ENST00000637325 KMT2DO14686 5537 aa5.74□□□□□ -1.49
PNKP-228ENST00000637325 SERP2Q8N6R1 65 aa5.7□□□□□ -1.5
PNKP-228ENST00000637325 SPANXA2-OT1Q8N9U9 137 aa5.7□□□□□ -1.5
PNKP-228ENST00000637325 MDN1Q9NU22 5596 aa5.68□□□□□ -1.5
PNKP-228ENST00000637325 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
PNKP-228ENST00000637325 SPRR2FQ96RM1 72 aa5.65□□□□□ -1.5
PNKP-228ENST00000637325 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
PNKP-228ENST00000637325 KRTAP20-1Q3LI63 56 aa5.63□□□□□ -1.51
PNKP-228ENST00000637325 SPRR2EP22531 72 aa5.57□□□□□ -1.52
PNKP-228ENST00000637325 SPRR2BP35325 72 aa5.57□□□□□ -1.52
PNKP-228ENST00000637325 SPRR2AP35326 72 aa5.57□□□□□ -1.52
PNKP-228ENST00000637325 COA5Q86WW8 74 aa5.55□□□□□ -1.52
PNKP-228ENST00000637325 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
PNKP-228ENST00000637325 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
PNKP-228ENST00000637325 COX7CP15954 63 aa5.53□□□□□ -1.52
PNKP-228ENST00000637325 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
PNKP-228ENST00000637325 SEC61GP60059 68 aa5.5□□□□□ -1.53
PNKP-228ENST00000637325 KRTAP10-12P60413 245 aa5.5□□□□□ -1.53
PNKP-228ENST00000637325 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
PNKP-228ENST00000637325 SERP1Q9Y6X1 66 aa5.5□□□□□ -1.53
PNKP-228ENST00000637325 KRTAP2-3P0C7H8 128 aa5.49□□□□□ -1.53
PNKP-228ENST00000637325 KRTAP2-4Q9BYR9 128 aa5.49□□□□□ -1.53
PNKP-228ENST00000637325 CAMK2N1Q7Z7J9 78 aa5.47□□□□□ -1.53
PNKP-228ENST00000637325 LCE1AQ5T7P2 110 aa5.45□□□□□ -1.54
PNKP-228ENST00000637325 H7BZZ5 65 aa5.42□□□□□ -1.54
PNKP-228ENST00000637325 A0A0D9SG42 100 aa5.4□□□□□ -1.54
PNKP-228ENST00000637325 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
PNKP-228ENST00000637325 SPRR2DP22532 72 aa5.39□□□□□ -1.55
PNKP-228ENST00000637325 A0A1B0GU33 70 aa5.37□□□□□ -1.55
PNKP-228ENST00000637325 SPATA8Q6RVD6 105 aa5.36□□□□□ -1.55
PNKP-228ENST00000637325 ANAPC13Q9BS18 74 aa5.35□□□□□ -1.55
PNKP-228ENST00000637325 SPINT4Q6UDR6 99 aa5.34□□□□□ -1.55
PNKP-228ENST00000637325 KRTAP2-2Q9BYT5 123 aa5.31□□□□□ -1.56
PNKP-228ENST00000637325 KRTAP2-1Q9BYU5 128 aa5.31□□□□□ -1.56
PNKP-228ENST00000637325 A0A1B0GU69 56 aa5.3□□□□□ -1.56
PNKP-228ENST00000637325 SMIM26A0A096LP01 95 aa5.24□□□□□ -1.57
PNKP-228ENST00000637325 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
PNKP-228ENST00000637325 LCE3BQ5TA77 95 aa5.23□□□□□ -1.57
PNKP-228ENST00000637325 CCDC179H3BU77 68 aa5.22□□□□□ -1.57
PNKP-228ENST00000637325 ATP5EP56381 51 aaPredicted RBP5.18□□□□□ -1.58
PNKP-228ENST00000637325 A8MU10 97 aa5.16□□□□□ -1.58
PNKP-228ENST00000637325 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
PNKP-228ENST00000637325 PRR15LQ9BU68 103 aa5.16□□□□□ -1.58
PNKP-228ENST00000637325 MT1EP04732 61 aa5.13□□□□□ -1.59
PNKP-228ENST00000637325 KRTAP19-3Q7Z4W3 81 aa5.1□□□□□ -1.59
PNKP-228ENST00000637325 LCE5AQ5TCM9 118 aa5.08□□□□□ -1.6
PNKP-228ENST00000637325 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
PNKP-228ENST00000637325 LINC01558Q9Y6Z2 57 aa5.06□□□□□ -1.6
PNKP-228ENST00000637325 TNP1P09430 55 aa5.04□□□□□ -1.6
PNKP-228ENST00000637325 TMEM258P61165 79 aa5.03□□□□□ -1.6
PNKP-228ENST00000637325 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
PNKP-228ENST00000637325 MT1GP13640 62 aa4.98□□□□□ -1.61
PNKP-228ENST00000637325 DSTQ03001 7570 aaKnown RBP4.98□□□□□ -1.61
PNKP-228ENST00000637325 PP632Q6XCG6 107 aa4.97□□□□□ -1.61
PNKP-228ENST00000637325 UQCR11O14957 56 aa4.96□□□□□ -1.62
PNKP-228ENST00000637325 LCE3AQ5TA76 89 aa4.96□□□□□ -1.62
PNKP-228ENST00000637325 MT1LQ93083 61 aa4.9□□□□□ -1.63
PNKP-228ENST00000637325 MT1MQ8N339 61 aa4.89□□□□□ -1.63
PNKP-228ENST00000637325 MIR22HGQ0VDD5 57 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 171.7 ms