RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 Q6ZRX8 168 aa4.24□□□□□ -1.73
CLN5-217ENST00000637278 SMR3BP02814 79 aaPredicted RBP4.24□□□□□ -1.73
CLN5-217ENST00000637278 SPACA4Q8TDM5 124 aa4.22□□□□□ -1.73
CLN5-217ENST00000637278 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
CLN5-217ENST00000637278 H0YAA0 97 aa4.2□□□□□ -1.74
CLN5-217ENST00000637278 C10orf95Q9H7T3 257 aa4.2□□□□□ -1.74
CLN5-217ENST00000637278 SRRM2Q9UQ35 2752 aaKnown RBP4.19□□□□□ -1.74
CLN5-217ENST00000637278 DNAH8Q96JB1 4490 aa4.18□□□□□ -1.74
CLN5-217ENST00000637278 TP53AIP1Q9HCN2 124 aa4.18□□□□□ -1.74
CLN5-217ENST00000637278 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
CLN5-217ENST00000637278 DMBT1Q9UGM3 2413 aaPredicted RBP4.16□□□□□ -1.74
CLN5-217ENST00000637278 KRTAP10-8P60410 259 aa4.14□□□□□ -1.75
CLN5-217ENST00000637278 GVQW2A0A096LPI5 108 aaPredicted RBP4.13□□□□□ -1.75
CLN5-217ENST00000637278 CLPSL2Q6UWE3 100 aa4.13□□□□□ -1.75
CLN5-217ENST00000637278 PKHD1L1Q86WI1 4243 aa4.13□□□□□ -1.75
CLN5-217ENST00000637278 MMP24-AS1A0A0U1RRL7 71 aa4.12□□□□□ -1.75
CLN5-217ENST00000637278 IGFL1Q6UW32 110 aa4.1□□□□□ -1.75
CLN5-217ENST00000637278 UNQ6190/PRO20217Q6UXQ8 127 aa4.1□□□□□ -1.75
CLN5-217ENST00000637278 MYCBP2O75592 4640 aa4.1□□□□□ -1.75
CLN5-217ENST00000637278 FAT1Q14517 4588 aa4.09□□□□□ -1.75
CLN5-217ENST00000637278 LCE5AQ5TCM9 118 aa4.09□□□□□ -1.75
CLN5-217ENST00000637278 SPINK6Q6UWN8 80 aa4.08□□□□□ -1.76
CLN5-217ENST00000637278 KRTAP9-4Q9BYQ2 154 aa4.08□□□□□ -1.76
CLN5-217ENST00000637278 HERC1Q15751 4861 aa4.06□□□□□ -1.76
CLN5-217ENST00000637278 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
CLN5-217ENST00000637278 A0A096LNI7 61 aa4.05□□□□□ -1.76
CLN5-217ENST00000637278 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
CLN5-217ENST00000637278 FAT3Q8TDW7 4589 aa4.02□□□□□ -1.77
CLN5-217ENST00000637278 PLAC4Q8WY50 150 aa4.02□□□□□ -1.77
CLN5-217ENST00000637278 MRPL34Q9BQ48 92 aaKnown RBP4.02□□□□□ -1.77
CLN5-217ENST00000637278 HMCN2Q8NDA2 5059 aa4□□□□□ -1.77
CLN5-217ENST00000637278 ANAPC11Q9NYG5 84 aa3.99□□□□□ -1.77
CLN5-217ENST00000637278 SPINK1P00995 79 aa3.98□□□□□ -1.77
CLN5-217ENST00000637278 KRTAP9-9Q9BYP9 154 aa3.98□□□□□ -1.77
CLN5-217ENST00000637278 PRLHP81277 87 aa3.96□□□□□ -1.77
CLN5-217ENST00000637278 H1FX-AS1Q4G0G2 97 aa3.94□□□□□ -1.78
CLN5-217ENST00000637278 LRP1Q07954 4544 aaKnown RBP3.94□□□□□ -1.78
CLN5-217ENST00000637278 TNXBP22105 4242 aa3.92□□□□□ -1.78
CLN5-217ENST00000637278 KRTAP9-6A0A140TA67 174 aa3.91□□□□□ -1.78
CLN5-217ENST00000637278 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
CLN5-217ENST00000637278 KRTAP13-3Q3SY46 172 aa3.89□□□□□ -1.79
CLN5-217ENST00000637278 KRTAP1-4P0C5Y4 121 aa3.88□□□□□ -1.79
CLN5-217ENST00000637278 RPL37P61927 97 aaKnown RBP3.88□□□□□ -1.79
CLN5-217ENST00000637278 XP32Q5T750 250 aa3.87□□□□□ -1.79
CLN5-217ENST00000637278 UBR4Q5T4S7 5183 aa3.85□□□□□ -1.79
CLN5-217ENST00000637278 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
CLN5-217ENST00000637278 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
CLN5-217ENST00000637278 KRTAP4-6Q9BYQ5 205 aa3.83□□□□□ -1.8
CLN5-217ENST00000637278 INE1O15225 51 aa3.83□□□□□ -1.8
CLN5-217ENST00000637278 KRTAP13-1Q8IUC0 172 aa3.82□□□□□ -1.8
CLN5-217ENST00000637278 SPRR1AP35321 89 aa3.79□□□□□ -1.8
CLN5-217ENST00000637278 COX6B2Q6YFQ2 88 aa3.79□□□□□ -1.8
CLN5-217ENST00000637278 RNF213Q63HN8 5207 aa3.78□□□□□ -1.8
CLN5-217ENST00000637278 A0A0D9SG42 100 aa3.77□□□□□ -1.81
CLN5-217ENST00000637278 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
CLN5-217ENST00000637278 LRP2P98164 4655 aa3.76□□□□□ -1.81
CLN5-217ENST00000637278 KRTAP13-2Q52LG2 175 aa3.76□□□□□ -1.81
CLN5-217ENST00000637278 RPS29P62273 56 aaKnown RBP3.75□□□□□ -1.81
CLN5-217ENST00000637278 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
CLN5-217ENST00000637278 KRTAP12-2P59991 146 aa3.69□□□□□ -1.82
CLN5-217ENST00000637278 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
CLN5-217ENST00000637278 S4R3F8 94 aa3.67□□□□□ -1.82
CLN5-217ENST00000637278 LCE3CQ5T5A8 94 aa3.66□□□□□ -1.82
CLN5-217ENST00000637278 LPAP08519 4548 aa3.66□□□□□ -1.82
CLN5-217ENST00000637278 KRTAP9-2Q9BYQ4 174 aa3.65□□□□□ -1.83
CLN5-217ENST00000637278 SPRR1BP22528 89 aa3.64□□□□□ -1.83
CLN5-217ENST00000637278 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
CLN5-217ENST00000637278 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
CLN5-217ENST00000637278 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.84
CLN5-217ENST00000637278 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
CLN5-217ENST00000637278 FAT4Q6V0I7 4981 aa3.54□□□□□ -1.84
CLN5-217ENST00000637278 KRTAP4-8Q9BYQ9 185 aa3.52□□□□□ -1.85
CLN5-217ENST00000637278 KRTAP4-1Q9BYQ7 146 aa3.51□□□□□ -1.85
CLN5-217ENST00000637278 MUC2Q02817 5179 aa3.5□□□□□ -1.85
CLN5-217ENST00000637278 C9orf92A6NGG3 77 aa3.48□□□□□ -1.85
CLN5-217ENST00000637278 KRTAP19-1Q8IUB9 90 aa3.48□□□□□ -1.85
CLN5-217ENST00000637278 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
CLN5-217ENST00000637278 MT1HP80294 61 aa3.46□□□□□ -1.85
CLN5-217ENST00000637278 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.85
CLN5-217ENST00000637278 KRTAP19-2Q3LHN2 52 aa3.46□□□□□ -1.86
CLN5-217ENST00000637278 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
CLN5-217ENST00000637278 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
CLN5-217ENST00000637278 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
CLN5-217ENST00000637278 LCE3EQ5T5B0 92 aa3.44□□□□□ -1.86
CLN5-217ENST00000637278 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.43□□□□□ -1.86
CLN5-217ENST00000637278 M0R2T5 61 aa3.42□□□□□ -1.86
CLN5-217ENST00000637278 KRTAP4-12Q9BQ66 201 aa3.37□□□□□ -1.87
CLN5-217ENST00000637278 LCE3BQ5TA77 95 aa3.35□□□□□ -1.87
CLN5-217ENST00000637278 FLGP20930 4061 aaPredicted RBP3.28□□□□□ -1.88
CLN5-217ENST00000637278 LCE1DQ5T752 114 aa3.25□□□□□ -1.89
CLN5-217ENST00000637278 KRTAP9-8Q9BYQ0 159 aa3.25□□□□□ -1.89
CLN5-217ENST00000637278 KRTAP4-8A0A0G2JLE6 195 aa3.22□□□□□ -1.89
CLN5-217ENST00000637278 MT2AP02795 61 aa3.21□□□□□ -1.9
CLN5-217ENST00000637278 KRTAP10-12P60413 245 aa3.2□□□□□ -1.9
CLN5-217ENST00000637278 KRTAP10-10P60014 251 aa3.18□□□□□ -1.9
CLN5-217ENST00000637278 MT1FP04733 61 aa3.17□□□□□ -1.9
CLN5-217ENST00000637278 FSIP2Q5CZC0 6907 aa3.16□□□□□ -1.9
CLN5-217ENST00000637278 LCE3DQ9BYE3 92 aa3.15□□□□□ -1.9
CLN5-217ENST00000637278 M0QZ58 72 aa3.14□□□□□ -1.91
CLN5-217ENST00000637278 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms