RNA–Protein interactions for RNA: ENST00000636822.2

TCF4-281, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-281ENST00000636822 ZANQ9Y493 2812 aa2.33□□□□□ -2.04
TCF4-281ENST00000636822 KRTAP3-2Q9BYR7 98 aa2.31□□□□□ -2.04
TCF4-281ENST00000636822 KRTAP3-3Q9BYR6 98 aa2.31□□□□□ -2.04
TCF4-281ENST00000636822 FBN2P35556 2912 aa2.3□□□□□ -2.04
TCF4-281ENST00000636822 VPS13BQ7Z7G8 4022 aa2.3□□□□□ -2.04
TCF4-281ENST00000636822 MEGF8Q7Z7M0 2845 aa2.29□□□□□ -2.04
TCF4-281ENST00000636822 MXRA5Q9NR99 2828 aa2.27□□□□□ -2.05
TCF4-281ENST00000636822 PKD1L1Q8TDX9 2849 aa2.26□□□□□ -2.05
TCF4-281ENST00000636822 DNAH1Q9P2D7 4330 aa2.25□□□□□ -2.05
TCF4-281ENST00000636822 DYNC2H1Q8NCM8 4307 aaKnown RBP2.25□□□□□ -2.05
TCF4-281ENST00000636822 PKHD1L1Q86WI1 4243 aa2.25□□□□□ -2.05
TCF4-281ENST00000636822 BIRC6Q9NR09 4857 aa2.21□□□□□ -2.06
TCF4-281ENST00000636822 FBN1P35555 2871 aaKnown RBP2.21□□□□□ -2.06
TCF4-281ENST00000636822 PCLOQ9Y6V0 5065 aa2.2□□□□□ -2.06
TCF4-281ENST00000636822 FBN3Q75N90 2809 aa2.2□□□□□ -2.06
TCF4-281ENST00000636822 CRCT1Q9UGL9 99 aa2.2□□□□□ -2.06
TCF4-281ENST00000636822 RYR3Q15413 4870 aa2.2□□□□□ -2.06
TCF4-281ENST00000636822 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
TCF4-281ENST00000636822 PKHD1P08F94 4074 aa2.17□□□□□ -2.06
TCF4-281ENST00000636822 KRTAP10-5P60370 271 aa2.17□□□□□ -2.06
TCF4-281ENST00000636822 RYR2Q92736 4967 aa2.16□□□□□ -2.06
TCF4-281ENST00000636822 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
TCF4-281ENST00000636822 DNAH10Q8IVF4 4471 aa2.16□□□□□ -2.06
TCF4-281ENST00000636822 KRTAP10-12P60413 245 aa2.16□□□□□ -2.06
TCF4-281ENST00000636822 VPS13DQ5THJ4 4388 aa2.16□□□□□ -2.06
TCF4-281ENST00000636822 LCE2AQ5TA79 106 aaPredicted RBP2.16□□□□□ -2.06
TCF4-281ENST00000636822 FAT2Q9NYQ8 4349 aa2.15□□□□□ -2.07
TCF4-281ENST00000636822 DNAH9Q9NYC9 4486 aa2.14□□□□□ -2.07
TCF4-281ENST00000636822 DNAH2Q9P225 4427 aa2.12□□□□□ -2.07
TCF4-281ENST00000636822 HERC2O95714 4834 aa2.12□□□□□ -2.07
TCF4-281ENST00000636822 HYDINQ4G0P3 5121 aa2.12□□□□□ -2.07
TCF4-281ENST00000636822 VWFP04275 2813 aa2.11□□□□□ -2.07
TCF4-281ENST00000636822 KRTAP4-5Q9BYR2 181 aa2.1□□□□□ -2.07
TCF4-281ENST00000636822 EPPK1P58107 5090 aaKnown RBP2.09□□□□□ -2.07
TCF4-281ENST00000636822 HERC1Q15751 4861 aa2.09□□□□□ -2.07
TCF4-281ENST00000636822 TNXBP22105 4242 aa2.05□□□□□ -2.08
TCF4-281ENST00000636822 KMT2CQ8NEZ4 4911 aaKnown RBP2.04□□□□□ -2.08
TCF4-281ENST00000636822 LORP23490 312 aaPredicted RBP2.04□□□□□ -2.08
TCF4-281ENST00000636822 DNAH11Q96DT5 4516 aa2.04□□□□□ -2.08
TCF4-281ENST00000636822 MT1HL1P0DM35 61 aa2.03□□□□□ -2.08
TCF4-281ENST00000636822 PKD1P98161 4303 aa2.02□□□□□ -2.09
TCF4-281ENST00000636822 KRTAP10-4P60372 401 aaPredicted RBP2.01□□□□□ -2.09
TCF4-281ENST00000636822 SPRR5A0A1B0GTR4 108 aa2.01□□□□□ -2.09
TCF4-281ENST00000636822 STARD9Q9P2P6 4700 aa2□□□□□ -2.09
TCF4-281ENST00000636822 DNAH8Q96JB1 4490 aa2□□□□□ -2.09
TCF4-281ENST00000636822 MT3P25713 68 aa1.99□□□□□ -2.09
TCF4-281ENST00000636822 FLGP20930 4061 aaPredicted RBP1.98□□□□□ -2.09
TCF4-281ENST00000636822 DNAH17Q9UFH2 4485 aa1.98□□□□□ -2.09
TCF4-281ENST00000636822 ABCA13Q86UQ4 5058 aa1.97□□□□□ -2.09
TCF4-281ENST00000636822 SACSQ9NZJ4 4579 aa1.97□□□□□ -2.09
TCF4-281ENST00000636822 KRTAP12-4P60329 112 aa1.97□□□□□ -2.09
TCF4-281ENST00000636822 KRTAP19-4Q3LI73 84 aa1.94□□□□□ -2.1
TCF4-281ENST00000636822 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
TCF4-281ENST00000636822 DYNC1H1Q14204 4646 aaKnown RBP1.92□□□□□ -2.1
TCF4-281ENST00000636822 PLECQ15149 4684 aaKnown RBP1.91□□□□□ -2.1
TCF4-281ENST00000636822 KRTAP8-1Q8IUC2 63 aa1.91□□□□□ -2.1
TCF4-281ENST00000636822 LCE2CQ5TA81 110 aa1.9□□□□□ -2.1
TCF4-281ENST00000636822 KIAA1109Q2LD37 5005 aa1.9□□□□□ -2.11
TCF4-281ENST00000636822 HSPG2P98160 4391 aa1.9□□□□□ -2.11
TCF4-281ENST00000636822 DNAH5Q8TE73 4624 aa1.87□□□□□ -2.11
TCF4-281ENST00000636822 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
TCF4-281ENST00000636822 KRTAP10-7P60409 375 aaPredicted RBP1.86□□□□□ -2.11
TCF4-281ENST00000636822 UBR4Q5T4S7 5183 aa1.85□□□□□ -2.11
TCF4-281ENST00000636822 HMCN2Q8NDA2 5059 aa1.85□□□□□ -2.11
TCF4-281ENST00000636822 LRP1BQ9NZR2 4599 aa1.84□□□□□ -2.11
TCF4-281ENST00000636822 MYCBP2O75592 4640 aa1.84□□□□□ -2.11
TCF4-281ENST00000636822 LCE2BO14633 110 aa1.82□□□□□ -2.12
TCF4-281ENST00000636822 APOBP04114 4563 aaKnown RBP1.82□□□□□ -2.12
TCF4-281ENST00000636822 SPRR2FQ96RM1 72 aa1.81□□□□□ -2.12
TCF4-281ENST00000636822 KRTAP19-5Q3LI72 72 aa1.81□□□□□ -2.12
TCF4-281ENST00000636822 MT1HP80294 61 aa1.81□□□□□ -2.12
TCF4-281ENST00000636822 MT2AP02795 61 aa1.79□□□□□ -2.12
TCF4-281ENST00000636822 FAT1Q14517 4588 aa1.78□□□□□ -2.12
TCF4-281ENST00000636822 FAT3Q8TDW7 4589 aa1.78□□□□□ -2.12
TCF4-281ENST00000636822 MUC17Q685J3 4493 aa1.78□□□□□ -2.12
TCF4-281ENST00000636822 PRM1P04553 51 aa1.77□□□□□ -2.13
TCF4-281ENST00000636822 LCE3BQ5TA77 95 aa1.77□□□□□ -2.13
TCF4-281ENST00000636822 FAT4Q6V0I7 4981 aa1.76□□□□□ -2.13
TCF4-281ENST00000636822 MT1FP04733 61 aa1.76□□□□□ -2.13
TCF4-281ENST00000636822 SPRR2GQ9BYE4 73 aa1.76□□□□□ -2.13
TCF4-281ENST00000636822 SPRR2EP22531 72 aa1.76□□□□□ -2.13
TCF4-281ENST00000636822 SPRR2BP35325 72 aa1.76□□□□□ -2.13
TCF4-281ENST00000636822 SPRR2AP35326 72 aa1.76□□□□□ -2.13
TCF4-281ENST00000636822 LCE3DQ9BYE3 92 aa1.75□□□□□ -2.13
TCF4-281ENST00000636822 LCE3EQ5T5B0 92 aa1.75□□□□□ -2.13
TCF4-281ENST00000636822 LPAP08519 4548 aa1.74□□□□□ -2.13
TCF4-281ENST00000636822 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
TCF4-281ENST00000636822 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
TCF4-281ENST00000636822 LOC100996750A0A140TA64 210 aa1.71□□□□□ -2.14
TCF4-281ENST00000636822 KRTAP4-6Q9BYQ5 205 aa1.71□□□□□ -2.14
TCF4-281ENST00000636822 SPRR2DP22532 72 aa1.69□□□□□ -2.14
TCF4-281ENST00000636822 KRTAP19-1Q8IUB9 90 aa1.66□□□□□ -2.14
TCF4-281ENST00000636822 KRTAP19-8Q3LI54 63 aa1.65□□□□□ -2.14
TCF4-281ENST00000636822 MT1XP80297 61 aa1.64□□□□□ -2.15
TCF4-281ENST00000636822 LRP1Q07954 4544 aaKnown RBP1.64□□□□□ -2.15
TCF4-281ENST00000636822 MT1BP07438 61 aa1.63□□□□□ -2.15
TCF4-281ENST00000636822 KMT2DO14686 5537 aa1.63□□□□□ -2.15
TCF4-281ENST00000636822 MT1GP13640 62 aa1.63□□□□□ -2.15
TCF4-281ENST00000636822 MUC2Q02817 5179 aa1.63□□□□□ -2.15
TCF4-281ENST00000636822 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms