RNA–Protein interactions for RNA: ENST00000636751.2

TCF4-280, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 8,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-280ENST00000636751 KRTAP19-4Q3LI73 84 aa2.41□□□□□ -2.02
TCF4-280ENST00000636751 MT1HL1P0DM35 61 aa2.39□□□□□ -2.03
TCF4-280ENST00000636751 KRTAP10-4P60372 401 aaPredicted RBP2.38□□□□□ -2.03
TCF4-280ENST00000636751 KMT2AQ03164 3969 aa2.36□□□□□ -2.03
TCF4-280ENST00000636751 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
TCF4-280ENST00000636751 CSMD2Q7Z408 3487 aa2.36□□□□□ -2.03
TCF4-280ENST00000636751 FRAS1Q86XX4 4008 aa2.36□□□□□ -2.03
TCF4-280ENST00000636751 KRTAP10-6P60371 365 aaPredicted RBP2.34□□□□□ -2.04
TCF4-280ENST00000636751 KRTAP13-4Q3LI77 160 aa2.33□□□□□ -2.04
TCF4-280ENST00000636751 SVEP1Q4LDE5 3571 aa2.33□□□□□ -2.04
TCF4-280ENST00000636751 LCE2DQ5TA82 110 aaPredicted RBP2.33□□□□□ -2.04
TCF4-280ENST00000636751 PCLOQ9Y6V0 5065 aa2.32□□□□□ -2.04
TCF4-280ENST00000636751 CSMD3Q7Z407 3707 aa2.31□□□□□ -2.04
TCF4-280ENST00000636751 KRTAP3-3Q9BYR6 98 aa2.31□□□□□ -2.04
TCF4-280ENST00000636751 KRTAP3-2Q9BYR7 98 aa2.31□□□□□ -2.04
TCF4-280ENST00000636751 DYNC2H1Q8NCM8 4307 aaKnown RBP2.3□□□□□ -2.04
TCF4-280ENST00000636751 PKHD1P08F94 4074 aa2.26□□□□□ -2.05
TCF4-280ENST00000636751 LORP23490 312 aaPredicted RBP2.26□□□□□ -2.05
TCF4-280ENST00000636751 DNAH9Q9NYC9 4486 aa2.26□□□□□ -2.05
TCF4-280ENST00000636751 FAT2Q9NYQ8 4349 aa2.25□□□□□ -2.05
TCF4-280ENST00000636751 KRTAP12-1P59990 96 aa2.24□□□□□ -2.05
TCF4-280ENST00000636751 FLGP20930 4061 aaPredicted RBP2.22□□□□□ -2.05
TCF4-280ENST00000636751 PKHD1L1Q86WI1 4243 aa2.2□□□□□ -2.06
TCF4-280ENST00000636751 DNAH17Q9UFH2 4485 aa2.2□□□□□ -2.06
TCF4-280ENST00000636751 DNAH10Q8IVF4 4471 aa2.2□□□□□ -2.06
TCF4-280ENST00000636751 VPS13DQ5THJ4 4388 aa2.2□□□□□ -2.06
TCF4-280ENST00000636751 KRTAP10-7P60409 375 aaPredicted RBP2.16□□□□□ -2.06
TCF4-280ENST00000636751 MT3P25713 68 aa2.14□□□□□ -2.07
TCF4-280ENST00000636751 KRTAP8-1Q8IUC2 63 aa2.14□□□□□ -2.07
TCF4-280ENST00000636751 DNAH2Q9P225 4427 aa2.14□□□□□ -2.07
TCF4-280ENST00000636751 SPRR2GQ9BYE4 73 aa2.12□□□□□ -2.07
TCF4-280ENST00000636751 HYDINQ4G0P3 5121 aa2.12□□□□□ -2.07
TCF4-280ENST00000636751 KRTAP10-12P60413 245 aa2.1□□□□□ -2.07
TCF4-280ENST00000636751 DNAH11Q96DT5 4516 aa2.1□□□□□ -2.07
TCF4-280ENST00000636751 KRTAP4-5Q9BYR2 181 aa2.09□□□□□ -2.07
TCF4-280ENST00000636751 KRTAP3-1Q9BYR8 98 aa2.09□□□□□ -2.07
TCF4-280ENST00000636751 KRTAP10-5P60370 271 aa2.08□□□□□ -2.08
TCF4-280ENST00000636751 SPRR5A0A1B0GTR4 108 aa2.08□□□□□ -2.08
TCF4-280ENST00000636751 RYR2Q92736 4967 aa2.08□□□□□ -2.08
TCF4-280ENST00000636751 DYNC1H1Q14204 4646 aaKnown RBP2.07□□□□□ -2.08
TCF4-280ENST00000636751 STARD9Q9P2P6 4700 aa2.07□□□□□ -2.08
TCF4-280ENST00000636751 DNAH8Q96JB1 4490 aa2.07□□□□□ -2.08
TCF4-280ENST00000636751 MT1HP80294 61 aa2.04□□□□□ -2.08
TCF4-280ENST00000636751 UBR4Q5T4S7 5183 aa2.03□□□□□ -2.08
TCF4-280ENST00000636751 LRP1BQ9NZR2 4599 aa2.01□□□□□ -2.09
TCF4-280ENST00000636751 KRTAP19-8Q3LI54 63 aa2.01□□□□□ -2.09
TCF4-280ENST00000636751 SPRR2FQ96RM1 72 aa2□□□□□ -2.09
TCF4-280ENST00000636751 TNXBP22105 4242 aa1.99□□□□□ -2.09
TCF4-280ENST00000636751 PLECQ15149 4684 aaKnown RBP1.99□□□□□ -2.09
TCF4-280ENST00000636751 PKD1P98161 4303 aa1.98□□□□□ -2.09
TCF4-280ENST00000636751 LCE2CQ5TA81 110 aa1.98□□□□□ -2.09
TCF4-280ENST00000636751 HSPG2P98160 4391 aa1.97□□□□□ -2.09
TCF4-280ENST00000636751 KRTAP12-3P60328 96 aa1.96□□□□□ -2.1
TCF4-280ENST00000636751 SPRR2EP22531 72 aa1.96□□□□□ -2.1
TCF4-280ENST00000636751 SPRR2BP35325 72 aa1.96□□□□□ -2.1
TCF4-280ENST00000636751 SPRR2AP35326 72 aa1.96□□□□□ -2.1
TCF4-280ENST00000636751 MT2AP02795 61 aa1.96□□□□□ -2.1
TCF4-280ENST00000636751 ABCA13Q86UQ4 5058 aa1.95□□□□□ -2.1
TCF4-280ENST00000636751 DNAH5Q8TE73 4624 aa1.95□□□□□ -2.1
TCF4-280ENST00000636751 KIAA1109Q2LD37 5005 aa1.95□□□□□ -2.1
TCF4-280ENST00000636751 LCE2BO14633 110 aa1.94□□□□□ -2.1
TCF4-280ENST00000636751 LRP1Q07954 4544 aaKnown RBP1.92□□□□□ -2.1
TCF4-280ENST00000636751 LCE2AQ5TA79 106 aaPredicted RBP1.91□□□□□ -2.1
TCF4-280ENST00000636751 SPRR2DP22532 72 aa1.91□□□□□ -2.1
TCF4-280ENST00000636751 MYCBP2O75592 4640 aa1.9□□□□□ -2.1
TCF4-280ENST00000636751 SACSQ9NZJ4 4579 aa1.89□□□□□ -2.11
TCF4-280ENST00000636751 DNHD1Q96M86 4753 aa1.89□□□□□ -2.11
TCF4-280ENST00000636751 APOBP04114 4563 aaKnown RBP1.89□□□□□ -2.11
TCF4-280ENST00000636751 MT1FP04733 61 aa1.89□□□□□ -2.11
TCF4-280ENST00000636751 FAT1Q14517 4588 aa1.89□□□□□ -2.11
TCF4-280ENST00000636751 KRTAP12-4P60329 112 aa1.88□□□□□ -2.11
TCF4-280ENST00000636751 KRTAP19-6Q3LI70 58 aa1.88□□□□□ -2.11
TCF4-280ENST00000636751 LCE3AQ5TA76 89 aa1.88□□□□□ -2.11
TCF4-280ENST00000636751 FAT3Q8TDW7 4589 aa1.85□□□□□ -2.11
TCF4-280ENST00000636751 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
TCF4-280ENST00000636751 KRTAP9-8Q9BYQ0 159 aa1.84□□□□□ -2.11
TCF4-280ENST00000636751 LCE1AQ5T7P2 110 aa1.84□□□□□ -2.12
TCF4-280ENST00000636751 BIRC6Q9NR09 4857 aa1.84□□□□□ -2.12
TCF4-280ENST00000636751 KRTAP9-2Q9BYQ4 174 aa1.83□□□□□ -2.12
TCF4-280ENST00000636751 RYR3Q15413 4870 aa1.83□□□□□ -2.12
TCF4-280ENST00000636751 KRTAP9-6A0A140TA67 174 aa1.82□□□□□ -2.12
TCF4-280ENST00000636751 SYNE1Q8NF91 8797 aaKnown RBP1.82□□□□□ -2.12
TCF4-280ENST00000636751 MT1GP13640 62 aa1.81□□□□□ -2.12
TCF4-280ENST00000636751 KRTAP9-3Q9BYQ3 159 aa1.81□□□□□ -2.12
TCF4-280ENST00000636751 KRTAP19-1Q8IUB9 90 aa1.81□□□□□ -2.12
TCF4-280ENST00000636751 RNF213Q63HN8 5207 aa1.8□□□□□ -2.12
TCF4-280ENST00000636751 KRTAP6-3Q3LI67 103 aa1.77□□□□□ -2.13
TCF4-280ENST00000636751 USH2AO75445 5202 aa1.77□□□□□ -2.13
TCF4-280ENST00000636751 HERC1Q15751 4861 aa1.77□□□□□ -2.13
TCF4-280ENST00000636751 EPPK1P58107 5090 aaKnown RBP1.77□□□□□ -2.13
TCF4-280ENST00000636751 HMCN2Q8NDA2 5059 aa1.77□□□□□ -2.13
TCF4-280ENST00000636751 KRTAP19-2Q3LHN2 52 aa1.75□□□□□ -2.13
TCF4-280ENST00000636751 HERC2O95714 4834 aa1.75□□□□□ -2.13
TCF4-280ENST00000636751 LCE3CQ5T5A8 94 aa1.72□□□□□ -2.13
TCF4-280ENST00000636751 MUC17Q685J3 4493 aa1.72□□□□□ -2.13
TCF4-280ENST00000636751 MT1XP80297 61 aa1.72□□□□□ -2.13
TCF4-280ENST00000636751 FAT4Q6V0I7 4981 aa1.71□□□□□ -2.14
TCF4-280ENST00000636751 MT1BP07438 61 aa1.71□□□□□ -2.14
TCF4-280ENST00000636751 MT1LQ93083 61 aa1.71□□□□□ -2.14
TCF4-280ENST00000636751 MT4P47944 62 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms