RNA–Protein interactions for RNA: ENST00000636666.1

EPB41-213, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 5

Gene EPB41, Length 3,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-213ENST00000636666 KRTAP10-8P60410 259 aa3.43□□□□□ -1.86
EPB41-213ENST00000636666 VPS13BQ7Z7G8 4022 aa3.43□□□□□ -1.86
EPB41-213ENST00000636666 M0QZ58 72 aa3.43□□□□□ -1.86
EPB41-213ENST00000636666 DNAH5Q8TE73 4624 aa3.43□□□□□ -1.86
EPB41-213ENST00000636666 R4GN34 69 aa3.43□□□□□ -1.86
EPB41-213ENST00000636666 MYCBP2O75592 4640 aa3.42□□□□□ -1.86
EPB41-213ENST00000636666 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
EPB41-213ENST00000636666 KRTAP12-2P59991 146 aa3.41□□□□□ -1.86
EPB41-213ENST00000636666 XP32Q5T750 250 aa3.4□□□□□ -1.86
EPB41-213ENST00000636666 FAT2Q9NYQ8 4349 aa3.38□□□□□ -1.87
EPB41-213ENST00000636666 HYDINQ4G0P3 5121 aa3.38□□□□□ -1.87
EPB41-213ENST00000636666 CAMK2N1Q7Z7J9 78 aa3.36□□□□□ -1.87
EPB41-213ENST00000636666 PKHD1P08F94 4074 aa3.34□□□□□ -1.87
EPB41-213ENST00000636666 PKHD1L1Q86WI1 4243 aa3.34□□□□□ -1.87
EPB41-213ENST00000636666 KRTAP12-1P59990 96 aa3.33□□□□□ -1.88
EPB41-213ENST00000636666 DYNC1H1Q14204 4646 aaKnown RBP3.33□□□□□ -1.88
EPB41-213ENST00000636666 SACSQ9NZJ4 4579 aa3.32□□□□□ -1.88
EPB41-213ENST00000636666 LCE2BO14633 110 aa3.31□□□□□ -1.88
EPB41-213ENST00000636666 LUZP6Q538Z0 58 aa3.31□□□□□ -1.88
EPB41-213ENST00000636666 LRP1Q07954 4544 aaKnown RBP3.31□□□□□ -1.88
EPB41-213ENST00000636666 FAT3Q8TDW7 4589 aa3.3□□□□□ -1.88
EPB41-213ENST00000636666 A0A1B0GVY2 172 aa3.3□□□□□ -1.88
EPB41-213ENST00000636666 KRTAP10-4P60372 401 aaPredicted RBP3.29□□□□□ -1.88
EPB41-213ENST00000636666 J3QL48 77 aa3.28□□□□□ -1.88
EPB41-213ENST00000636666 PLAC4Q8WY50 150 aa3.25□□□□□ -1.89
EPB41-213ENST00000636666 KRTAP15-1Q3LI76 137 aa3.24□□□□□ -1.89
EPB41-213ENST00000636666 APOBP04114 4563 aaKnown RBP3.24□□□□□ -1.89
EPB41-213ENST00000636666 TNXBP22105 4242 aa3.22□□□□□ -1.89
EPB41-213ENST00000636666 SEC61BP60468 96 aaKnown RBP3.2□□□□□ -1.9
EPB41-213ENST00000636666 HSPG2P98160 4391 aa3.2□□□□□ -1.9
EPB41-213ENST00000636666 KIAA1109Q2LD37 5005 aa3.19□□□□□ -1.9
EPB41-213ENST00000636666 LRP2P98164 4655 aa3.18□□□□□ -1.9
EPB41-213ENST00000636666 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
EPB41-213ENST00000636666 LOC100996750A0A140TA64 210 aa3.18□□□□□ -1.9
EPB41-213ENST00000636666 KRTAP4-6Q9BYQ5 205 aa3.18□□□□□ -1.9
EPB41-213ENST00000636666 LORP23490 312 aaPredicted RBP3.16□□□□□ -1.9
EPB41-213ENST00000636666 RYR1P21817 5038 aa3.16□□□□□ -1.9
EPB41-213ENST00000636666 MT1HL1P0DM35 61 aa3.15□□□□□ -1.9
EPB41-213ENST00000636666 LCE2CQ5TA81 110 aa3.14□□□□□ -1.91
EPB41-213ENST00000636666 KMT2CQ8NEZ4 4911 aaKnown RBP3.14□□□□□ -1.91
EPB41-213ENST00000636666 M0R2T5 61 aa3.13□□□□□ -1.91
EPB41-213ENST00000636666 LPAP08519 4548 aa3.1□□□□□ -1.91
EPB41-213ENST00000636666 TNP1P09430 55 aa3.09□□□□□ -1.91
EPB41-213ENST00000636666 KRTAP17-1Q9BYP8 105 aa3.09□□□□□ -1.91
EPB41-213ENST00000636666 RYR3Q15413 4870 aa3.09□□□□□ -1.92
EPB41-213ENST00000636666 KRTAP4-5Q9BYR2 181 aa3.08□□□□□ -1.92
EPB41-213ENST00000636666 LCE2AQ5TA79 106 aaPredicted RBP3.05□□□□□ -1.92
EPB41-213ENST00000636666 PP632Q6XCG6 107 aa3.05□□□□□ -1.92
EPB41-213ENST00000636666 RYR2Q92736 4967 aa3.03□□□□□ -1.92
EPB41-213ENST00000636666 KRTAP21-3Q3LHN1 58 aa3.02□□□□□ -1.93
EPB41-213ENST00000636666 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
EPB41-213ENST00000636666 KRTAP4-1Q9BYQ7 146 aa3□□□□□ -1.93
EPB41-213ENST00000636666 MUC2Q02817 5179 aa2.99□□□□□ -1.93
EPB41-213ENST00000636666 ABCA13Q86UQ4 5058 aa2.98□□□□□ -1.93
EPB41-213ENST00000636666 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
EPB41-213ENST00000636666 HERC2O95714 4834 aa2.85□□□□□ -1.95
EPB41-213ENST00000636666 FAT4Q6V0I7 4981 aa2.84□□□□□ -1.95
EPB41-213ENST00000636666 MUC17Q685J3 4493 aa2.84□□□□□ -1.96
EPB41-213ENST00000636666 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
EPB41-213ENST00000636666 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
EPB41-213ENST00000636666 KRTAP4-8Q9BYQ9 185 aa2.8□□□□□ -1.96
EPB41-213ENST00000636666 FLGP20930 4061 aaPredicted RBP2.75□□□□□ -1.97
EPB41-213ENST00000636666 HERC1Q15751 4861 aa2.74□□□□□ -1.97
EPB41-213ENST00000636666 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.74□□□□□ -1.97
EPB41-213ENST00000636666 KRTAP9-2Q9BYQ4 174 aa2.73□□□□□ -1.97
EPB41-213ENST00000636666 KRTAP9-6A0A140TA67 174 aa2.72□□□□□ -1.97
EPB41-213ENST00000636666 KRTAP19-2Q3LHN2 52 aa2.72□□□□□ -1.97
EPB41-213ENST00000636666 KRTAP12-3P60328 96 aa2.7□□□□□ -1.98
EPB41-213ENST00000636666 KRTAP10-12P60413 245 aa2.7□□□□□ -1.98
EPB41-213ENST00000636666 KRTAP19-1Q8IUB9 90 aa2.7□□□□□ -1.98
EPB41-213ENST00000636666 HMCN2Q8NDA2 5059 aa2.7□□□□□ -1.98
EPB41-213ENST00000636666 PCLOQ9Y6V0 5065 aa2.7□□□□□ -1.98
EPB41-213ENST00000636666 KRTAP23-1A1A580 65 aa2.69□□□□□ -1.98
EPB41-213ENST00000636666 MT1FP04733 61 aa2.67□□□□□ -1.98
EPB41-213ENST00000636666 SPRR2GQ9BYE4 73 aa2.67□□□□□ -1.98
EPB41-213ENST00000636666 PRO2289Q9P1D8 64 aa2.67□□□□□ -1.98
EPB41-213ENST00000636666 UBR4Q5T4S7 5183 aa2.66□□□□□ -1.98
EPB41-213ENST00000636666 SPRR5A0A1B0GTR4 108 aa2.65□□□□□ -1.98
EPB41-213ENST00000636666 MT2AP02795 61 aa2.65□□□□□ -1.98
EPB41-213ENST00000636666 MT1HP80294 61 aa2.65□□□□□ -1.99
EPB41-213ENST00000636666 LCE3BQ5TA77 95 aa2.64□□□□□ -1.99
EPB41-213ENST00000636666 KRTAP4-8A0A0G2JLE6 195 aa2.63□□□□□ -1.99
EPB41-213ENST00000636666 INE1O15225 51 aa2.61□□□□□ -1.99
EPB41-213ENST00000636666 KRTAP8-1Q8IUC2 63 aa2.6□□□□□ -1.99
EPB41-213ENST00000636666 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
EPB41-213ENST00000636666 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
EPB41-213ENST00000636666 KRTAP10-7P60409 375 aaPredicted RBP2.59□□□□□ -2
EPB41-213ENST00000636666 BIRC6Q9NR09 4857 aa2.57□□□□□ -2
EPB41-213ENST00000636666 USH2AO75445 5202 aa2.57□□□□□ -2
EPB41-213ENST00000636666 KRTAP4-7Q9BYR0 210 aa2.56□□□□□ -2
EPB41-213ENST00000636666 MT1XP80297 61 aa2.56□□□□□ -2
EPB41-213ENST00000636666 KRTAP4-12Q9BQ66 201 aa2.56□□□□□ -2
EPB41-213ENST00000636666 KRTAP10-5P60370 271 aa2.55□□□□□ -2
EPB41-213ENST00000636666 KMT2DO14686 5537 aa2.55□□□□□ -2
EPB41-213ENST00000636666 FSIP2Q5CZC0 6907 aa2.54□□□□□ -2
EPB41-213ENST00000636666 KRTAP9-8Q9BYQ0 159 aa2.54□□□□□ -2
EPB41-213ENST00000636666 MT1BP07438 61 aa2.54□□□□□ -2
EPB41-213ENST00000636666 KRTAP19-5Q3LI72 72 aa2.53□□□□□ -2
EPB41-213ENST00000636666 CRCT1Q9UGL9 99 aa2.5□□□□□ -2.01
EPB41-213ENST00000636666 KRTAP19-8Q3LI54 63 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms