RNA–Protein interactions for RNA: ENST00000636448.1

CACNA1D-209, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 5

Gene CACNA1D, Length 3,978 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-209ENST00000636448 KRTAP12-1P59990 96 aa4□□□□□ -1.77
CACNA1D-209ENST00000636448 ALMS1Q8TCU4 4167 aa3.98□□□□□ -1.77
CACNA1D-209ENST00000636448 DNAH8Q96JB1 4490 aa3.97□□□□□ -1.77
CACNA1D-209ENST00000636448 FAT1Q14517 4588 aa3.96□□□□□ -1.78
CACNA1D-209ENST00000636448 STARD9Q9P2P6 4700 aa3.96□□□□□ -1.78
CACNA1D-209ENST00000636448 MYCBP2O75592 4640 aa3.95□□□□□ -1.78
CACNA1D-209ENST00000636448 DNAH6Q9C0G6 4158 aa3.95□□□□□ -1.78
CACNA1D-209ENST00000636448 KRTAP3-3Q9BYR6 98 aa3.95□□□□□ -1.78
CACNA1D-209ENST00000636448 KRTAP3-2Q9BYR7 98 aa3.95□□□□□ -1.78
CACNA1D-209ENST00000636448 DNAH5Q8TE73 4624 aa3.93□□□□□ -1.78
CACNA1D-209ENST00000636448 KMT2AQ03164 3969 aa3.89□□□□□ -1.79
CACNA1D-209ENST00000636448 KRTAP10-10P60014 251 aa3.88□□□□□ -1.79
CACNA1D-209ENST00000636448 HECTD4Q9Y4D8 3996 aa3.88□□□□□ -1.79
CACNA1D-209ENST00000636448 LRP1BQ9NZR2 4599 aa3.87□□□□□ -1.79
CACNA1D-209ENST00000636448 RYR3Q15413 4870 aa3.85□□□□□ -1.79
CACNA1D-209ENST00000636448 FAT3Q8TDW7 4589 aa3.84□□□□□ -1.79
CACNA1D-209ENST00000636448 FRAS1Q86XX4 4008 aa3.84□□□□□ -1.8
CACNA1D-209ENST00000636448 PP632Q6XCG6 107 aa3.83□□□□□ -1.8
CACNA1D-209ENST00000636448 KRTAP4-5Q9BYR2 181 aa3.83□□□□□ -1.8
CACNA1D-209ENST00000636448 KIAA1109Q2LD37 5005 aa3.83□□□□□ -1.8
CACNA1D-209ENST00000636448 MT1HL1P0DM35 61 aa3.79□□□□□ -1.8
CACNA1D-209ENST00000636448 KRTAP10-4P60372 401 aaPredicted RBP3.79□□□□□ -1.8
CACNA1D-209ENST00000636448 DNAH2Q9P225 4427 aa3.79□□□□□ -1.8
CACNA1D-209ENST00000636448 RYR2Q92736 4967 aa3.78□□□□□ -1.8
CACNA1D-209ENST00000636448 VPS13DQ5THJ4 4388 aa3.78□□□□□ -1.81
CACNA1D-209ENST00000636448 LORP23490 312 aaPredicted RBP3.77□□□□□ -1.81
CACNA1D-209ENST00000636448 FAT2Q9NYQ8 4349 aa3.77□□□□□ -1.81
CACNA1D-209ENST00000636448 RYR1P21817 5038 aa3.77□□□□□ -1.81
CACNA1D-209ENST00000636448 DYNC1H1Q14204 4646 aaKnown RBP3.76□□□□□ -1.81
CACNA1D-209ENST00000636448 KMT2CQ8NEZ4 4911 aaKnown RBP3.76□□□□□ -1.81
CACNA1D-209ENST00000636448 HYDINQ4G0P3 5121 aa3.76□□□□□ -1.81
CACNA1D-209ENST00000636448 LCE2DQ5TA82 110 aaPredicted RBP3.75□□□□□ -1.81
CACNA1D-209ENST00000636448 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
CACNA1D-209ENST00000636448 SACSQ9NZJ4 4579 aa3.74□□□□□ -1.81
CACNA1D-209ENST00000636448 KRTAP15-1Q3LI76 137 aa3.74□□□□□ -1.81
CACNA1D-209ENST00000636448 VPS13BQ7Z7G8 4022 aa3.74□□□□□ -1.81
CACNA1D-209ENST00000636448 LRP1Q07954 4544 aaKnown RBP3.73□□□□□ -1.81
CACNA1D-209ENST00000636448 APOBP04114 4563 aaKnown RBP3.7□□□□□ -1.82
CACNA1D-209ENST00000636448 PKHD1P08F94 4074 aa3.67□□□□□ -1.82
CACNA1D-209ENST00000636448 BIRC6Q9NR09 4857 aa3.67□□□□□ -1.82
CACNA1D-209ENST00000636448 PKHD1L1Q86WI1 4243 aa3.66□□□□□ -1.82
CACNA1D-209ENST00000636448 HERC2O95714 4834 aa3.63□□□□□ -1.83
CACNA1D-209ENST00000636448 PKD1P98161 4303 aa3.63□□□□□ -1.83
CACNA1D-209ENST00000636448 KRTAP17-1Q9BYP8 105 aa3.61□□□□□ -1.83
CACNA1D-209ENST00000636448 EPPK1P58107 5090 aaKnown RBP3.61□□□□□ -1.83
CACNA1D-209ENST00000636448 LRP2P98164 4655 aa3.61□□□□□ -1.83
CACNA1D-209ENST00000636448 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
CACNA1D-209ENST00000636448 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
CACNA1D-209ENST00000636448 LCE3AQ5TA76 89 aa3.48□□□□□ -1.85
CACNA1D-209ENST00000636448 CRCT1Q9UGL9 99 aa3.45□□□□□ -1.86
CACNA1D-209ENST00000636448 PCLOQ9Y6V0 5065 aa3.45□□□□□ -1.86
CACNA1D-209ENST00000636448 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
CACNA1D-209ENST00000636448 ABCA13Q86UQ4 5058 aa3.42□□□□□ -1.86
CACNA1D-209ENST00000636448 HSPG2P98160 4391 aa3.41□□□□□ -1.86
CACNA1D-209ENST00000636448 LPAP08519 4548 aa3.4□□□□□ -1.86
CACNA1D-209ENST00000636448 KRTAP12-3P60328 96 aa3.4□□□□□ -1.87
CACNA1D-209ENST00000636448 LCE2BO14633 110 aa3.37□□□□□ -1.87
CACNA1D-209ENST00000636448 OBSCNQ5VST9 7968 aa3.34□□□□□ -1.88
CACNA1D-209ENST00000636448 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
CACNA1D-209ENST00000636448 HERC1Q15751 4861 aa3.31□□□□□ -1.88
CACNA1D-209ENST00000636448 RNF213Q63HN8 5207 aa3.31□□□□□ -1.88
CACNA1D-209ENST00000636448 LCE2CQ5TA81 110 aa3.3□□□□□ -1.88
CACNA1D-209ENST00000636448 MUC2Q02817 5179 aa3.29□□□□□ -1.88
CACNA1D-209ENST00000636448 TNXBP22105 4242 aa3.27□□□□□ -1.89
CACNA1D-209ENST00000636448 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
CACNA1D-209ENST00000636448 MT1FP04733 61 aa3.24□□□□□ -1.89
CACNA1D-209ENST00000636448 MT2AP02795 61 aa3.24□□□□□ -1.89
CACNA1D-209ENST00000636448 MT1HP80294 61 aa3.23□□□□□ -1.89
CACNA1D-209ENST00000636448 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.89
CACNA1D-209ENST00000636448 INE1O15225 51 aa3.21□□□□□ -1.9
CACNA1D-209ENST00000636448 FAT4Q6V0I7 4981 aa3.2□□□□□ -1.9
CACNA1D-209ENST00000636448 KRTAP23-1A1A580 65 aa3.18□□□□□ -1.9
CACNA1D-209ENST00000636448 SPRR2GQ9BYE4 73 aa3.16□□□□□ -1.9
CACNA1D-209ENST00000636448 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
CACNA1D-209ENST00000636448 KRTAP10-5P60370 271 aa3.15□□□□□ -1.9
CACNA1D-209ENST00000636448 HMCN2Q8NDA2 5059 aa3.15□□□□□ -1.91
CACNA1D-209ENST00000636448 KRTAP10-7P60409 375 aaPredicted RBP3.12□□□□□ -1.91
CACNA1D-209ENST00000636448 KRTAP19-5Q3LI72 72 aa3.11□□□□□ -1.91
CACNA1D-209ENST00000636448 LCE2AQ5TA79 106 aaPredicted RBP3.11□□□□□ -1.91
CACNA1D-209ENST00000636448 MUC17Q685J3 4493 aa3.11□□□□□ -1.91
CACNA1D-209ENST00000636448 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
CACNA1D-209ENST00000636448 KRTAP4-8A0A0G2JLE6 195 aa3.05□□□□□ -1.92
CACNA1D-209ENST00000636448 KRTAP4-8Q9BYQ9 185 aa3.05□□□□□ -1.92
CACNA1D-209ENST00000636448 MT1XP80297 61 aa3.02□□□□□ -1.93
CACNA1D-209ENST00000636448 LCE3CQ5T5A8 94 aa3□□□□□ -1.93
CACNA1D-209ENST00000636448 MT1BP07438 61 aa2.99□□□□□ -1.93
CACNA1D-209ENST00000636448 DSTQ03001 7570 aaKnown RBP2.98□□□□□ -1.93
CACNA1D-209ENST00000636448 KRTAP9-8Q9BYQ0 159 aa2.98□□□□□ -1.93
CACNA1D-209ENST00000636448 KRTAP4-7Q9BYR0 210 aa2.97□□□□□ -1.93
CACNA1D-209ENST00000636448 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
CACNA1D-209ENST00000636448 FCGBPQ9Y6R7 5405 aaPredicted RBP2.94□□□□□ -1.94
CACNA1D-209ENST00000636448 FLGP20930 4061 aaPredicted RBP2.93□□□□□ -1.94
CACNA1D-209ENST00000636448 KRTAP19-8Q3LI54 63 aa2.93□□□□□ -1.94
CACNA1D-209ENST00000636448 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
CACNA1D-209ENST00000636448 USH2AO75445 5202 aa2.9□□□□□ -1.95
CACNA1D-209ENST00000636448 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
CACNA1D-209ENST00000636448 KMT2DO14686 5537 aa2.87□□□□□ -1.95
CACNA1D-209ENST00000636448 MT1GP13640 62 aa2.86□□□□□ -1.95
CACNA1D-209ENST00000636448 KRTAP9-3Q9BYQ3 159 aa2.85□□□□□ -1.95
CACNA1D-209ENST00000636448 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms