RNA–Protein interactions for RNA: ENST00000636384.2

SCN2A-211, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 9,007 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-211ENST00000636384 WDFY3Q8IZQ1 3526 aa1.81□□□□□ -2.12
SCN2A-211ENST00000636384 FBN2P35556 2912 aa1.81□□□□□ -2.12
SCN2A-211ENST00000636384 LCE2AQ5TA79 106 aaPredicted RBP1.81□□□□□ -2.12
SCN2A-211ENST00000636384 KRTAP12-4P60329 112 aa1.8□□□□□ -2.12
SCN2A-211ENST00000636384 DNAH3Q8TD57 4116 aa1.78□□□□□ -2.12
SCN2A-211ENST00000636384 VPS13CQ709C8 3753 aa1.77□□□□□ -2.13
SCN2A-211ENST00000636384 DNAH7Q8WXX0 4024 aa1.76□□□□□ -2.13
SCN2A-211ENST00000636384 TRRAPQ9Y4A5 3859 aa1.73□□□□□ -2.13
SCN2A-211ENST00000636384 RELNP78509 3460 aa1.73□□□□□ -2.13
SCN2A-211ENST00000636384 LCE3EQ5T5B0 92 aa1.73□□□□□ -2.13
SCN2A-211ENST00000636384 LCE3BQ5TA77 95 aa1.73□□□□□ -2.13
SCN2A-211ENST00000636384 LCE3DQ9BYE3 92 aa1.72□□□□□ -2.13
SCN2A-211ENST00000636384 FLGP20930 4061 aaPredicted RBP1.72□□□□□ -2.13
SCN2A-211ENST00000636384 DNAH6Q9C0G6 4158 aa1.71□□□□□ -2.14
SCN2A-211ENST00000636384 SPRR2FQ96RM1 72 aa1.71□□□□□ -2.14
SCN2A-211ENST00000636384 LAMA5O15230 3695 aa1.69□□□□□ -2.14
SCN2A-211ENST00000636384 SMG1Q96Q15 3661 aaKnown RBP1.69□□□□□ -2.14
SCN2A-211ENST00000636384 KMT2AQ03164 3969 aa1.68□□□□□ -2.14
SCN2A-211ENST00000636384 KRTAP19-5Q3LI72 72 aa1.68□□□□□ -2.14
SCN2A-211ENST00000636384 UBR4Q5T4S7 5183 aa1.67□□□□□ -2.14
SCN2A-211ENST00000636384 CSMD1Q96PZ7 3565 aa1.66□□□□□ -2.14
SCN2A-211ENST00000636384 CUBNO60494 3623 aa1.66□□□□□ -2.14
SCN2A-211ENST00000636384 RYR3Q15413 4870 aa1.65□□□□□ -2.14
SCN2A-211ENST00000636384 RYR2Q92736 4967 aa1.65□□□□□ -2.14
SCN2A-211ENST00000636384 LYSTQ99698 3801 aa1.64□□□□□ -2.15
SCN2A-211ENST00000636384 CSMD3Q7Z407 3707 aa1.64□□□□□ -2.15
SCN2A-211ENST00000636384 MT1HL1P0DM35 61 aa1.64□□□□□ -2.15
SCN2A-211ENST00000636384 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
SCN2A-211ENST00000636384 EPPK1P58107 5090 aaKnown RBP1.64□□□□□ -2.15
SCN2A-211ENST00000636384 PCLOQ9Y6V0 5065 aa1.63□□□□□ -2.15
SCN2A-211ENST00000636384 CSMD2Q7Z408 3487 aa1.62□□□□□ -2.15
SCN2A-211ENST00000636384 ZNF469Q96JG9 3925 aaPredicted RBP1.62□□□□□ -2.15
SCN2A-211ENST00000636384 SPRR2EP22531 72 aa1.62□□□□□ -2.15
SCN2A-211ENST00000636384 SPRR2BP35325 72 aa1.62□□□□□ -2.15
SCN2A-211ENST00000636384 SPRR2AP35326 72 aa1.62□□□□□ -2.15
SCN2A-211ENST00000636384 LCE2BO14633 110 aa1.61□□□□□ -2.15
SCN2A-211ENST00000636384 HECTD4Q9Y4D8 3996 aa1.6□□□□□ -2.15
SCN2A-211ENST00000636384 SVEP1Q4LDE5 3571 aa1.6□□□□□ -2.15
SCN2A-211ENST00000636384 ANK2Q01484 3957 aa1.59□□□□□ -2.15
SCN2A-211ENST00000636384 PRM1P04553 51 aa1.59□□□□□ -2.15
SCN2A-211ENST00000636384 SPRR2DP22532 72 aa1.59□□□□□ -2.16
SCN2A-211ENST00000636384 OBSCNQ5VST9 7968 aa1.58□□□□□ -2.16
SCN2A-211ENST00000636384 KIAA1109Q2LD37 5005 aa1.56□□□□□ -2.16
SCN2A-211ENST00000636384 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
SCN2A-211ENST00000636384 RNF213Q63HN8 5207 aa1.55□□□□□ -2.16
SCN2A-211ENST00000636384 LCE2CQ5TA81 110 aa1.55□□□□□ -2.16
SCN2A-211ENST00000636384 KMT2CQ8NEZ4 4911 aaKnown RBP1.53□□□□□ -2.16
SCN2A-211ENST00000636384 MT1GP13640 62 aa1.52□□□□□ -2.17
SCN2A-211ENST00000636384 ABCA13Q86UQ4 5058 aa1.51□□□□□ -2.17
SCN2A-211ENST00000636384 DNAH1Q9P2D7 4330 aa1.51□□□□□ -2.17
SCN2A-211ENST00000636384 PKHD1P08F94 4074 aa1.5□□□□□ -2.17
SCN2A-211ENST00000636384 FRAS1Q86XX4 4008 aa1.49□□□□□ -2.17
SCN2A-211ENST00000636384 FAT4Q6V0I7 4981 aa1.49□□□□□ -2.17
SCN2A-211ENST00000636384 SPRR5A0A1B0GTR4 108 aa1.48□□□□□ -2.17
SCN2A-211ENST00000636384 LCE1BQ5T7P3 118 aa1.47□□□□□ -2.17
SCN2A-211ENST00000636384 HERC1Q15751 4861 aa1.47□□□□□ -2.17
SCN2A-211ENST00000636384 HUWE1Q7Z6Z7 4374 aaKnown RBP1.47□□□□□ -2.17
SCN2A-211ENST00000636384 VPS13BQ7Z7G8 4022 aa1.47□□□□□ -2.17
SCN2A-211ENST00000636384 HMCN2Q8NDA2 5059 aa1.46□□□□□ -2.18
SCN2A-211ENST00000636384 LCE1DQ5T752 114 aa1.45□□□□□ -2.18
SCN2A-211ENST00000636384 MT1LQ93083 61 aa1.45□□□□□ -2.18
SCN2A-211ENST00000636384 LCE4AQ5TA78 99 aa1.44□□□□□ -2.18
SCN2A-211ENST00000636384 MT1HP80294 61 aa1.44□□□□□ -2.18
SCN2A-211ENST00000636384 PRKDCP78527 4128 aaKnown RBP1.44□□□□□ -2.18
SCN2A-211ENST00000636384 KRTAP19-8Q3LI54 63 aa1.42□□□□□ -2.18
SCN2A-211ENST00000636384 ANK3Q12955 4377 aaKnown RBP1.42□□□□□ -2.18
SCN2A-211ENST00000636384 MT2AP02795 61 aa1.42□□□□□ -2.18
SCN2A-211ENST00000636384 LCE5AQ5TCM9 118 aa1.41□□□□□ -2.18
SCN2A-211ENST00000636384 LCE1CQ5T751 118 aa1.4□□□□□ -2.18
SCN2A-211ENST00000636384 LCE1EQ5T753 118 aa1.4□□□□□ -2.18
SCN2A-211ENST00000636384 LCE1FQ5T754 118 aa1.4□□□□□ -2.18
SCN2A-211ENST00000636384 LCE1AQ5T7P2 110 aa1.4□□□□□ -2.18
SCN2A-211ENST00000636384 MT1FP04733 61 aa1.39□□□□□ -2.19
SCN2A-211ENST00000636384 FAT1Q14517 4588 aa1.37□□□□□ -2.19
SCN2A-211ENST00000636384 LRP1BQ9NZR2 4599 aa1.37□□□□□ -2.19
SCN2A-211ENST00000636384 USH2AO75445 5202 aa1.37□□□□□ -2.19
SCN2A-211ENST00000636384 HERC2O95714 4834 aa1.37□□□□□ -2.19
SCN2A-211ENST00000636384 BIRC6Q9NR09 4857 aa1.37□□□□□ -2.19
SCN2A-211ENST00000636384 PLECQ15149 4684 aaKnown RBP1.36□□□□□ -2.19
SCN2A-211ENST00000636384 FSIP2Q5CZC0 6907 aa1.36□□□□□ -2.19
SCN2A-211ENST00000636384 MT1XP80297 61 aa1.36□□□□□ -2.19
SCN2A-211ENST00000636384 MT4P47944 62 aa1.36□□□□□ -2.19
SCN2A-211ENST00000636384 KRTAP19-3Q7Z4W3 81 aa1.36□□□□□ -2.19
SCN2A-211ENST00000636384 MT1EP04732 61 aa1.34□□□□□ -2.19
SCN2A-211ENST00000636384 DYNC1H1Q14204 4646 aaKnown RBP1.34□□□□□ -2.19
SCN2A-211ENST00000636384 MUC2Q02817 5179 aa1.33□□□□□ -2.2
SCN2A-211ENST00000636384 DNAH8Q96JB1 4490 aa1.33□□□□□ -2.2
SCN2A-211ENST00000636384 DNAH10Q8IVF4 4471 aa1.33□□□□□ -2.2
SCN2A-211ENST00000636384 MT1AP04731 61 aa1.32□□□□□ -2.2
SCN2A-211ENST00000636384 DNAH5Q8TE73 4624 aa1.31□□□□□ -2.2
SCN2A-211ENST00000636384 SACSQ9NZJ4 4579 aa1.31□□□□□ -2.2
SCN2A-211ENST00000636384 KRTAP9-9Q9BYP9 154 aa1.3□□□□□ -2.2
SCN2A-211ENST00000636384 KRTAP9-4Q9BYQ2 154 aa1.3□□□□□ -2.2
SCN2A-211ENST00000636384 MT1MQ8N339 61 aa1.3□□□□□ -2.2
SCN2A-211ENST00000636384 DYNC2H1Q8NCM8 4307 aaKnown RBP1.28□□□□□ -2.2
SCN2A-211ENST00000636384 MT1BP07438 61 aa1.28□□□□□ -2.2
SCN2A-211ENST00000636384 KRTAP4-5Q9BYR2 181 aa1.28□□□□□ -2.21
SCN2A-211ENST00000636384 PKHD1L1Q86WI1 4243 aa1.28□□□□□ -2.21
SCN2A-211ENST00000636384 DNAH11Q96DT5 4516 aa1.27□□□□□ -2.21
SCN2A-211ENST00000636384 STARD9Q9P2P6 4700 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms