RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 PLECQ15149 4684 aaKnown RBP1.42□□□□□ -2.18
CD46-219ENST00000636114 SMR3BP02814 79 aaPredicted RBP1.41□□□□□ -2.18
CD46-219ENST00000636114 C20orf166-AS1Q96NR2 134 aa1.41□□□□□ -2.18
CD46-219ENST00000636114 PRKDCP78527 4128 aaKnown RBP1.41□□□□□ -2.18
CD46-219ENST00000636114 STARD9Q9P2P6 4700 aa1.41□□□□□ -2.18
CD46-219ENST00000636114 A8MUU9 505 aa1.41□□□□□ -2.18
CD46-219ENST00000636114 PSPHP1O15172 72 aa1.41□□□□□ -2.18
CD46-219ENST00000636114 KRTAP10-4P60372 401 aaPredicted RBP1.41□□□□□ -2.18
CD46-219ENST00000636114 CSMD3Q7Z407 3707 aa1.41□□□□□ -2.18
CD46-219ENST00000636114 NBEAL1Q6ZS30 2694 aa1.41□□□□□ -2.18
CD46-219ENST00000636114 A6NED7 52 aa1.4□□□□□ -2.19
CD46-219ENST00000636114 Q5VV11 94 aa1.4□□□□□ -2.19
CD46-219ENST00000636114 RBM12B-AS1Q9P1G2 102 aa1.4□□□□□ -2.19
CD46-219ENST00000636114 LYSTQ99698 3801 aa1.4□□□□□ -2.19
CD46-219ENST00000636114 DNAH17Q9UFH2 4485 aa1.4□□□□□ -2.19
CD46-219ENST00000636114 A0A1B0GU69 56 aa1.39□□□□□ -2.19
CD46-219ENST00000636114 ATP11AUNQ6ZP68 121 aa1.39□□□□□ -2.19
CD46-219ENST00000636114 DNAH7Q8WXX0 4024 aa1.39□□□□□ -2.19
CD46-219ENST00000636114 STAB2Q8WWQ8 2551 aa1.39□□□□□ -2.19
CD46-219ENST00000636114 KRTAP10-8P60410 259 aa1.39□□□□□ -2.19
CD46-219ENST00000636114 CDC42SE1Q9NRR8 79 aa1.39□□□□□ -2.19
CD46-219ENST00000636114 KMT2AQ03164 3969 aa1.39□□□□□ -2.19
CD46-219ENST00000636114 Q5VSD8 79 aa1.38□□□□□ -2.19
CD46-219ENST00000636114 RETNLBQ9BQ08 111 aa1.38□□□□□ -2.19
CD46-219ENST00000636114 DNAH6Q9C0G6 4158 aa1.38□□□□□ -2.19
CD46-219ENST00000636114 UQCR11O14957 56 aa1.38□□□□□ -2.19
CD46-219ENST00000636114 DNAH2Q9P225 4427 aa1.37□□□□□ -2.19
CD46-219ENST00000636114 DNAH8Q96JB1 4490 aa1.37□□□□□ -2.19
CD46-219ENST00000636114 C9orf92A6NGG3 77 aa1.37□□□□□ -2.19
CD46-219ENST00000636114 SPINK7P58062 85 aa1.37□□□□□ -2.19
CD46-219ENST00000636114 LCE3AQ5TA76 89 aa1.37□□□□□ -2.19
CD46-219ENST00000636114 ALMS1Q8TCU4 4167 aa1.37□□□□□ -2.19
CD46-219ENST00000636114 DNHD1Q96M86 4753 aa1.36□□□□□ -2.19
CD46-219ENST00000636114 RPL37P61927 97 aaKnown RBP1.36□□□□□ -2.19
CD46-219ENST00000636114 SPATA8Q6RVD6 105 aa1.36□□□□□ -2.19
CD46-219ENST00000636114 COX6B2Q6YFQ2 88 aa1.36□□□□□ -2.19
CD46-219ENST00000636114 FRAS1Q86XX4 4008 aa1.36□□□□□ -2.19
CD46-219ENST00000636114 DNAH11Q96DT5 4516 aa1.35□□□□□ -2.19
CD46-219ENST00000636114 MIR22HGQ0VDD5 57 aa1.35□□□□□ -2.19
CD46-219ENST00000636114 LCA10Q71F78 164 aa1.35□□□□□ -2.19
CD46-219ENST00000636114 MEGF8Q7Z7M0 2845 aa1.35□□□□□ -2.19
CD46-219ENST00000636114 TPRXLQ17RH7 258 aa1.35□□□□□ -2.19
CD46-219ENST00000636114 HYDINQ4G0P3 5121 aa1.35□□□□□ -2.19
CD46-219ENST00000636114 TENM2Q9NT68 2774 aa1.34□□□□□ -2.19
CD46-219ENST00000636114 FBN3Q75N90 2809 aa1.34□□□□□ -2.19
CD46-219ENST00000636114 DNAH5Q8TE73 4624 aa1.34□□□□□ -2.2
CD46-219ENST00000636114 LRP1BQ9NZR2 4599 aa1.34□□□□□ -2.2
CD46-219ENST00000636114 FAT2Q9NYQ8 4349 aa1.34□□□□□ -2.2
CD46-219ENST00000636114 KTN1-AS1Q86SY8 53 aa1.33□□□□□ -2.2
CD46-219ENST00000636114 PKD1P98161 4303 aa1.33□□□□□ -2.2
CD46-219ENST00000636114 TGP01266 2768 aa1.32□□□□□ -2.2
CD46-219ENST00000636114 SRRM2Q9UQ35 2752 aaKnown RBP1.32□□□□□ -2.2
CD46-219ENST00000636114 A0A1B0GU33 70 aa1.32□□□□□ -2.2
CD46-219ENST00000636114 K7ERS5 55 aa1.32□□□□□ -2.2
CD46-219ENST00000636114 MT1HL1P0DM35 61 aa1.32□□□□□ -2.2
CD46-219ENST00000636114 HECTD4Q9Y4D8 3996 aa1.32□□□□□ -2.2
CD46-219ENST00000636114 A6NN06 94 aa1.31□□□□□ -2.2
CD46-219ENST00000636114 VPS13BQ7Z7G8 4022 aa1.31□□□□□ -2.2
CD46-219ENST00000636114 H1FX-AS1Q4G0G2 97 aa1.31□□□□□ -2.2
CD46-219ENST00000636114 CAMK2N1Q7Z7J9 78 aa1.31□□□□□ -2.2
CD46-219ENST00000636114 S4R3F8 94 aa1.31□□□□□ -2.2
CD46-219ENST00000636114 SACSQ9NZJ4 4579 aa1.3□□□□□ -2.2
CD46-219ENST00000636114 CSAG1Q6PB30 78 aa1.29□□□□□ -2.2
CD46-219ENST00000636114 H0YAA0 97 aa1.28□□□□□ -2.2
CD46-219ENST00000636114 LINC01554Q52M75 96 aa1.28□□□□□ -2.2
CD46-219ENST00000636114 APOBP04114 4563 aaKnown RBP1.28□□□□□ -2.2
CD46-219ENST00000636114 FLG2Q5D862 2391 aaPredicted RBP1.28□□□□□ -2.21
CD46-219ENST00000636114 DYNC1H1Q14204 4646 aaKnown RBP1.28□□□□□ -2.21
CD46-219ENST00000636114 M0QZ58 72 aa1.27□□□□□ -2.21
CD46-219ENST00000636114 PKHD1L1Q86WI1 4243 aa1.27□□□□□ -2.21
CD46-219ENST00000636114 PKHD1P08F94 4074 aa1.27□□□□□ -2.21
CD46-219ENST00000636114 RYR2Q92736 4967 aa1.27□□□□□ -2.21
CD46-219ENST00000636114 LCE3DQ9BYE3 92 aa1.27□□□□□ -2.21
CD46-219ENST00000636114 LUZP6Q538Z0 58 aa1.25□□□□□ -2.21
CD46-219ENST00000636114 FAT1Q14517 4588 aa1.25□□□□□ -2.21
CD46-219ENST00000636114 ADM2Q7Z4H4 148 aa1.25□□□□□ -2.21
CD46-219ENST00000636114 HSPG2P98160 4391 aa1.24□□□□□ -2.21
CD46-219ENST00000636114 ROMO1P60602 79 aa1.24□□□□□ -2.21
CD46-219ENST00000636114 KMT2CQ8NEZ4 4911 aaKnown RBP1.23□□□□□ -2.21
CD46-219ENST00000636114 R4GN34 69 aa1.23□□□□□ -2.21
CD46-219ENST00000636114 FAT3Q8TDW7 4589 aa1.23□□□□□ -2.21
CD46-219ENST00000636114 TNXBP22105 4242 aa1.23□□□□□ -2.21
CD46-219ENST00000636114 SPRR5A0A1B0GTR4 108 aa1.22□□□□□ -2.21
CD46-219ENST00000636114 P0C880 135 aa1.22□□□□□ -2.21
CD46-219ENST00000636114 RYR1P21817 5038 aa1.22□□□□□ -2.21
CD46-219ENST00000636114 KRTAP25-1Q3LHN0 102 aa1.22□□□□□ -2.21
CD46-219ENST00000636114 PP632Q6XCG6 107 aa1.22□□□□□ -2.21
CD46-219ENST00000636114 CRIPTQ9P021 101 aa1.22□□□□□ -2.21
CD46-219ENST00000636114 A0A0D9SG42 100 aa1.21□□□□□ -2.22
CD46-219ENST00000636114 DMBT1Q9UGM3 2413 aaPredicted RBP1.21□□□□□ -2.22
CD46-219ENST00000636114 KRTAP13-4Q3LI77 160 aa1.2□□□□□ -2.22
CD46-219ENST00000636114 SPINT4Q6UDR6 99 aa1.2□□□□□ -2.22
CD46-219ENST00000636114 MUC5ACP98088 5654 aa1.2□□□□□ -2.22
CD46-219ENST00000636114 KRTAP12-1P59990 96 aa1.2□□□□□ -2.22
CD46-219ENST00000636114 KRTAP10-10P60014 251 aa1.2□□□□□ -2.22
CD46-219ENST00000636114 LRP1Q07954 4544 aaKnown RBP1.2□□□□□ -2.22
CD46-219ENST00000636114 LCE1CQ5T751 118 aa1.19□□□□□ -2.22
CD46-219ENST00000636114 LCE1BQ5T7P3 118 aa1.19□□□□□ -2.22
CD46-219ENST00000636114 RYR3Q15413 4870 aa1.19□□□□□ -2.22
CD46-219ENST00000636114 KIAA1109Q2LD37 5005 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms