RNA–Protein interactions for RNA: ENST00000635994.1

GABRB3-218, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 5,192 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-218ENST00000635994 KRTAP12-2P59991 146 aa3.09□□□□□ -1.91
GABRB3-218ENST00000635994 ZANQ9Y493 2812 aa3.08□□□□□ -1.92
GABRB3-218ENST00000635994 KRTAP15-1Q3LI76 137 aa3.08□□□□□ -1.92
GABRB3-218ENST00000635994 DNAH6Q9C0G6 4158 aa3.08□□□□□ -1.92
GABRB3-218ENST00000635994 PKD1P98161 4303 aa3.06□□□□□ -1.92
GABRB3-218ENST00000635994 HUWE1Q7Z6Z7 4374 aaKnown RBP3.05□□□□□ -1.92
GABRB3-218ENST00000635994 FAT2Q9NYQ8 4349 aa3.04□□□□□ -1.92
GABRB3-218ENST00000635994 DNAH9Q9NYC9 4486 aa3.04□□□□□ -1.92
GABRB3-218ENST00000635994 SACSQ9NZJ4 4579 aa3.02□□□□□ -1.93
GABRB3-218ENST00000635994 FAT3Q8TDW7 4589 aa3.01□□□□□ -1.93
GABRB3-218ENST00000635994 MEGF8Q7Z7M0 2845 aa3.01□□□□□ -1.93
GABRB3-218ENST00000635994 VWFP04275 2813 aa3.01□□□□□ -1.93
GABRB3-218ENST00000635994 RYR2Q92736 4967 aa3□□□□□ -1.93
GABRB3-218ENST00000635994 DNAH2Q9P225 4427 aa3□□□□□ -1.93
GABRB3-218ENST00000635994 STARD9Q9P2P6 4700 aa3□□□□□ -1.93
GABRB3-218ENST00000635994 KRTAP4-5Q9BYR2 181 aa2.99□□□□□ -1.93
GABRB3-218ENST00000635994 KRTAP12-1P59990 96 aa2.98□□□□□ -1.93
GABRB3-218ENST00000635994 KMT2AQ03164 3969 aa2.97□□□□□ -1.93
GABRB3-218ENST00000635994 TGP01266 2768 aa2.97□□□□□ -1.93
GABRB3-218ENST00000635994 INE1O15225 51 aa2.97□□□□□ -1.93
GABRB3-218ENST00000635994 VPS13DQ5THJ4 4388 aa2.96□□□□□ -1.94
GABRB3-218ENST00000635994 KRTAP17-1Q9BYP8 105 aa2.95□□□□□ -1.94
GABRB3-218ENST00000635994 EPPK1P58107 5090 aaKnown RBP2.95□□□□□ -1.94
GABRB3-218ENST00000635994 MT1HL1P0DM35 61 aa2.94□□□□□ -1.94
GABRB3-218ENST00000635994 PKHD1P08F94 4074 aa2.94□□□□□ -1.94
GABRB3-218ENST00000635994 DNAH11Q96DT5 4516 aa2.94□□□□□ -1.94
GABRB3-218ENST00000635994 VPS13BQ7Z7G8 4022 aa2.92□□□□□ -1.94
GABRB3-218ENST00000635994 PKHD1L1Q86WI1 4243 aa2.92□□□□□ -1.94
GABRB3-218ENST00000635994 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
GABRB3-218ENST00000635994 KRTAP10-4P60372 401 aaPredicted RBP2.9□□□□□ -1.95
GABRB3-218ENST00000635994 LCE2BO14633 110 aa2.89□□□□□ -1.95
GABRB3-218ENST00000635994 PCLOQ9Y6V0 5065 aa2.87□□□□□ -1.95
GABRB3-218ENST00000635994 PLECQ15149 4684 aaKnown RBP2.87□□□□□ -1.95
GABRB3-218ENST00000635994 KRTAP23-1A1A580 65 aa2.86□□□□□ -1.95
GABRB3-218ENST00000635994 DNAH17Q9UFH2 4485 aa2.84□□□□□ -1.95
GABRB3-218ENST00000635994 CRCT1Q9UGL9 99 aa2.83□□□□□ -1.96
GABRB3-218ENST00000635994 KRTAP3-1Q9BYR8 98 aa2.82□□□□□ -1.96
GABRB3-218ENST00000635994 DNAH10Q8IVF4 4471 aa2.82□□□□□ -1.96
GABRB3-218ENST00000635994 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
GABRB3-218ENST00000635994 KRTAP10-6P60371 365 aaPredicted RBP2.8□□□□□ -1.96
GABRB3-218ENST00000635994 DNAH5Q8TE73 4624 aa2.78□□□□□ -1.96
GABRB3-218ENST00000635994 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
GABRB3-218ENST00000635994 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
GABRB3-218ENST00000635994 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
GABRB3-218ENST00000635994 DNAH8Q96JB1 4490 aa2.74□□□□□ -1.97
GABRB3-218ENST00000635994 DYNC1H1Q14204 4646 aaKnown RBP2.73□□□□□ -1.97
GABRB3-218ENST00000635994 HSPG2P98160 4391 aa2.73□□□□□ -1.97
GABRB3-218ENST00000635994 HERC2O95714 4834 aa2.72□□□□□ -1.97
GABRB3-218ENST00000635994 APOBP04114 4563 aaKnown RBP2.69□□□□□ -1.98
GABRB3-218ENST00000635994 LCE2AQ5TA79 106 aaPredicted RBP2.68□□□□□ -1.98
GABRB3-218ENST00000635994 BIRC6Q9NR09 4857 aa2.68□□□□□ -1.98
GABRB3-218ENST00000635994 LORP23490 312 aaPredicted RBP2.67□□□□□ -1.98
GABRB3-218ENST00000635994 KRTAP19-4Q3LI73 84 aa2.67□□□□□ -1.98
GABRB3-218ENST00000635994 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
GABRB3-218ENST00000635994 LCE3AQ5TA76 89 aa2.65□□□□□ -1.98
GABRB3-218ENST00000635994 MYCBP2O75592 4640 aa2.63□□□□□ -1.99
GABRB3-218ENST00000635994 LRP1BQ9NZR2 4599 aa2.63□□□□□ -1.99
GABRB3-218ENST00000635994 TNXBP22105 4242 aa2.63□□□□□ -1.99
GABRB3-218ENST00000635994 RYR1P21817 5038 aa2.62□□□□□ -1.99
GABRB3-218ENST00000635994 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
GABRB3-218ENST00000635994 MT1HP80294 61 aa2.59□□□□□ -1.99
GABRB3-218ENST00000635994 HERC1Q15751 4861 aa2.58□□□□□ -2
GABRB3-218ENST00000635994 LOC100996750A0A140TA64 210 aa2.56□□□□□ -2
GABRB3-218ENST00000635994 KRTAP4-6Q9BYQ5 205 aa2.56□□□□□ -2
GABRB3-218ENST00000635994 KRTAP4-1Q9BYQ7 146 aa2.54□□□□□ -2
GABRB3-218ENST00000635994 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
GABRB3-218ENST00000635994 KIAA1109Q2LD37 5005 aa2.51□□□□□ -2.01
GABRB3-218ENST00000635994 FAT1Q14517 4588 aa2.5□□□□□ -2.01
GABRB3-218ENST00000635994 HMCN2Q8NDA2 5059 aa2.49□□□□□ -2.01
GABRB3-218ENST00000635994 SPRR2GQ9BYE4 73 aa2.47□□□□□ -2.01
GABRB3-218ENST00000635994 MT2AP02795 61 aa2.46□□□□□ -2.02
GABRB3-218ENST00000635994 LPAP08519 4548 aa2.42□□□□□ -2.02
GABRB3-218ENST00000635994 LRP1Q07954 4544 aaKnown RBP2.42□□□□□ -2.02
GABRB3-218ENST00000635994 SPRR2EP22531 72 aa2.41□□□□□ -2.02
GABRB3-218ENST00000635994 SPRR2BP35325 72 aa2.41□□□□□ -2.02
GABRB3-218ENST00000635994 SPRR2AP35326 72 aa2.41□□□□□ -2.02
GABRB3-218ENST00000635994 KRTAP12-4P60329 112 aa2.4□□□□□ -2.02
GABRB3-218ENST00000635994 MT1FP04733 61 aa2.4□□□□□ -2.03
GABRB3-218ENST00000635994 MUC17Q685J3 4493 aa2.4□□□□□ -2.03
GABRB3-218ENST00000635994 FLGP20930 4061 aaPredicted RBP2.39□□□□□ -2.03
GABRB3-218ENST00000635994 LCE3CQ5T5A8 94 aa2.39□□□□□ -2.03
GABRB3-218ENST00000635994 KRTAP19-5Q3LI72 72 aa2.37□□□□□ -2.03
GABRB3-218ENST00000635994 SPRR2DP22532 72 aa2.37□□□□□ -2.03
GABRB3-218ENST00000635994 KRTAP9-2Q9BYQ4 174 aa2.36□□□□□ -2.03
GABRB3-218ENST00000635994 MUC2Q02817 5179 aa2.36□□□□□ -2.03
GABRB3-218ENST00000635994 UBR4Q5T4S7 5183 aa2.36□□□□□ -2.03
GABRB3-218ENST00000635994 KRTAP9-6A0A140TA67 174 aa2.33□□□□□ -2.04
GABRB3-218ENST00000635994 SYNE1Q8NF91 8797 aaKnown RBP2.31□□□□□ -2.04
GABRB3-218ENST00000635994 KRTAP19-8Q3LI54 63 aa2.29□□□□□ -2.04
GABRB3-218ENST00000635994 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
GABRB3-218ENST00000635994 KRTAP19-1Q8IUB9 90 aa2.28□□□□□ -2.04
GABRB3-218ENST00000635994 MT1GP13640 62 aa2.27□□□□□ -2.05
GABRB3-218ENST00000635994 KRTAP9-8Q9BYQ0 159 aa2.27□□□□□ -2.05
GABRB3-218ENST00000635994 LRP2P98164 4655 aa2.27□□□□□ -2.05
GABRB3-218ENST00000635994 KRTAP4-8Q9BYQ9 185 aa2.26□□□□□ -2.05
GABRB3-218ENST00000635994 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.24□□□□□ -2.05
GABRB3-218ENST00000635994 KRTAP9-3Q9BYQ3 159 aa2.23□□□□□ -2.05
GABRB3-218ENST00000635994 LCE3BQ5TA77 95 aa2.22□□□□□ -2.05
GABRB3-218ENST00000635994 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
GABRB3-218ENST00000635994 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms