RNA–Protein interactions for RNA: ENST00000635786.1

CACNA1A-217, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,840 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-217ENST00000635786 SACSQ9NZJ4 4579 aa5.43□□□□□ -1.54
CACNA1A-217ENST00000635786 CRIPTQ9P021 101 aa5.42□□□□□ -1.54
CACNA1A-217ENST00000635786 FAT2Q9NYQ8 4349 aa5.4□□□□□ -1.54
CACNA1A-217ENST00000635786 DNAH5Q8TE73 4624 aa5.39□□□□□ -1.55
CACNA1A-217ENST00000635786 FLG2Q5D862 2391 aaPredicted RBP5.39□□□□□ -1.55
CACNA1A-217ENST00000635786 COX6B2Q6YFQ2 88 aa5.38□□□□□ -1.55
CACNA1A-217ENST00000635786 KRTAP9-9Q9BYP9 154 aa5.38□□□□□ -1.55
CACNA1A-217ENST00000635786 PKD1P98161 4303 aa5.38□□□□□ -1.55
CACNA1A-217ENST00000635786 RPL37P61927 97 aaKnown RBP5.35□□□□□ -1.55
CACNA1A-217ENST00000635786 KRTAP1-4P0C5Y4 121 aa5.34□□□□□ -1.55
CACNA1A-217ENST00000635786 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
CACNA1A-217ENST00000635786 KRTAP9-6A0A140TA67 174 aa5.33□□□□□ -1.56
CACNA1A-217ENST00000635786 KRTAP9-7A8MTY7 169 aa5.33□□□□□ -1.56
CACNA1A-217ENST00000635786 RPS29P62273 56 aaKnown RBP5.32□□□□□ -1.56
CACNA1A-217ENST00000635786 KMT2CQ8NEZ4 4911 aaKnown RBP5.32□□□□□ -1.56
CACNA1A-217ENST00000635786 RYR2Q92736 4967 aa5.31□□□□□ -1.56
CACNA1A-217ENST00000635786 PKHD1P08F94 4074 aa5.3□□□□□ -1.56
CACNA1A-217ENST00000635786 KRTAP10-8P60410 259 aa5.3□□□□□ -1.56
CACNA1A-217ENST00000635786 LRP1BQ9NZR2 4599 aa5.29□□□□□ -1.56
CACNA1A-217ENST00000635786 KRTAP10-1P60331 282 aa5.29□□□□□ -1.56
CACNA1A-217ENST00000635786 DYNC1H1Q14204 4646 aaKnown RBP5.25□□□□□ -1.57
CACNA1A-217ENST00000635786 KRTAP10-6P60371 365 aaPredicted RBP5.22□□□□□ -1.57
CACNA1A-217ENST00000635786 VPS13BQ7Z7G8 4022 aa5.2□□□□□ -1.58
CACNA1A-217ENST00000635786 RYR3Q15413 4870 aa5.2□□□□□ -1.58
CACNA1A-217ENST00000635786 C10orf95Q9H7T3 257 aa5.19□□□□□ -1.58
CACNA1A-217ENST00000635786 A0A1B0GVY2 172 aa5.19□□□□□ -1.58
CACNA1A-217ENST00000635786 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
CACNA1A-217ENST00000635786 A0A0D9SG42 100 aa5.18□□□□□ -1.58
CACNA1A-217ENST00000635786 C9orf92A6NGG3 77 aa5.17□□□□□ -1.58
CACNA1A-217ENST00000635786 APOBP04114 4563 aaKnown RBP5.17□□□□□ -1.58
CACNA1A-217ENST00000635786 FAT1Q14517 4588 aa5.16□□□□□ -1.58
CACNA1A-217ENST00000635786 S4R3F8 94 aa5.14□□□□□ -1.59
CACNA1A-217ENST00000635786 SMR3BP02814 79 aaPredicted RBP5.13□□□□□ -1.59
CACNA1A-217ENST00000635786 LOC100996750A0A140TA64 210 aa5.08□□□□□ -1.6
CACNA1A-217ENST00000635786 XP32Q5T750 250 aa5.08□□□□□ -1.6
CACNA1A-217ENST00000635786 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
CACNA1A-217ENST00000635786 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
CACNA1A-217ENST00000635786 LCE1FQ5T754 118 aa5.06□□□□□ -1.6
CACNA1A-217ENST00000635786 HSPG2P98160 4391 aa5.04□□□□□ -1.6
CACNA1A-217ENST00000635786 KRTAP12-1P59990 96 aa5.03□□□□□ -1.6
CACNA1A-217ENST00000635786 KRTAP10-4P60372 401 aaPredicted RBP5.03□□□□□ -1.6
CACNA1A-217ENST00000635786 DMBT1Q9UGM3 2413 aaPredicted RBP5.02□□□□□ -1.61
CACNA1A-217ENST00000635786 EPPK1P58107 5090 aaKnown RBP5.02□□□□□ -1.61
CACNA1A-217ENST00000635786 RYR1P21817 5038 aa5.01□□□□□ -1.61
CACNA1A-217ENST00000635786 KIAA1109Q2LD37 5005 aa5.01□□□□□ -1.61
CACNA1A-217ENST00000635786 KRTAP17-1Q9BYP8 105 aa4.98□□□□□ -1.61
CACNA1A-217ENST00000635786 M0QZ58 72 aa4.96□□□□□ -1.62
CACNA1A-217ENST00000635786 PKHD1L1Q86WI1 4243 aa4.96□□□□□ -1.62
CACNA1A-217ENST00000635786 LRP1Q07954 4544 aaKnown RBP4.94□□□□□ -1.62
CACNA1A-217ENST00000635786 KRTAP2-2Q9BYT5 123 aa4.93□□□□□ -1.62
CACNA1A-217ENST00000635786 Q5VSD8 79 aa4.92□□□□□ -1.62
CACNA1A-217ENST00000635786 INE1O15225 51 aa4.91□□□□□ -1.62
CACNA1A-217ENST00000635786 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
CACNA1A-217ENST00000635786 KRTAP9-3Q9BYQ3 159 aa4.88□□□□□ -1.63
CACNA1A-217ENST00000635786 TNXBP22105 4242 aa4.88□□□□□ -1.63
CACNA1A-217ENST00000635786 FAT3Q8TDW7 4589 aa4.87□□□□□ -1.63
CACNA1A-217ENST00000635786 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
CACNA1A-217ENST00000635786 MYCBP2O75592 4640 aa4.86□□□□□ -1.63
CACNA1A-217ENST00000635786 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
CACNA1A-217ENST00000635786 KRTAP4-5Q9BYR2 181 aa4.81□□□□□ -1.64
CACNA1A-217ENST00000635786 MT1HL1P0DM35 61 aa4.76□□□□□ -1.65
CACNA1A-217ENST00000635786 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
CACNA1A-217ENST00000635786 BIRC6Q9NR09 4857 aa4.75□□□□□ -1.65
CACNA1A-217ENST00000635786 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
CACNA1A-217ENST00000635786 LCE3CQ5T5A8 94 aa4.73□□□□□ -1.65
CACNA1A-217ENST00000635786 HERC2O95714 4834 aa4.72□□□□□ -1.65
CACNA1A-217ENST00000635786 MT3P25713 68 aa4.63□□□□□ -1.67
CACNA1A-217ENST00000635786 LPAP08519 4548 aa4.59□□□□□ -1.67
CACNA1A-217ENST00000635786 PCLOQ9Y6V0 5065 aa4.59□□□□□ -1.68
CACNA1A-217ENST00000635786 LRP2P98164 4655 aa4.58□□□□□ -1.68
CACNA1A-217ENST00000635786 SPRR5A0A1B0GTR4 108 aa4.54□□□□□ -1.68
CACNA1A-217ENST00000635786 HERC1Q15751 4861 aa4.52□□□□□ -1.69
CACNA1A-217ENST00000635786 HMCN2Q8NDA2 5059 aa4.42□□□□□ -1.7
CACNA1A-217ENST00000635786 TNP1P09430 55 aa4.42□□□□□ -1.7
CACNA1A-217ENST00000635786 LCE1EQ5T753 118 aa4.41□□□□□ -1.7
CACNA1A-217ENST00000635786 KRTAP4-8Q9BYQ9 185 aa4.41□□□□□ -1.7
CACNA1A-217ENST00000635786 KRTAP4-12Q9BQ66 201 aa4.4□□□□□ -1.7
CACNA1A-217ENST00000635786 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.7
CACNA1A-217ENST00000635786 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
CACNA1A-217ENST00000635786 MUC17Q685J3 4493 aa4.37□□□□□ -1.71
CACNA1A-217ENST00000635786 KRTAP4-1Q9BYQ7 146 aa4.36□□□□□ -1.71
CACNA1A-217ENST00000635786 MUC2Q02817 5179 aa4.34□□□□□ -1.71
CACNA1A-217ENST00000635786 UBR4Q5T4S7 5183 aa4.25□□□□□ -1.73
CACNA1A-217ENST00000635786 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
CACNA1A-217ENST00000635786 KRTAP19-2Q3LHN2 52 aa4.22□□□□□ -1.73
CACNA1A-217ENST00000635786 KRTAP9-8Q9BYQ0 159 aa4.22□□□□□ -1.73
CACNA1A-217ENST00000635786 LCE1DQ5T752 114 aa4.2□□□□□ -1.74
CACNA1A-217ENST00000635786 KRTAP9-2Q9BYQ4 174 aa4.2□□□□□ -1.74
CACNA1A-217ENST00000635786 KRTAP10-10P60014 251 aa4.19□□□□□ -1.74
CACNA1A-217ENST00000635786 KRTAP4-8A0A0G2JLE6 195 aa4.17□□□□□ -1.74
CACNA1A-217ENST00000635786 FLGP20930 4061 aaPredicted RBP4.17□□□□□ -1.74
CACNA1A-217ENST00000635786 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.17□□□□□ -1.74
CACNA1A-217ENST00000635786 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
CACNA1A-217ENST00000635786 LCE3BQ5TA77 95 aa4.11□□□□□ -1.75
CACNA1A-217ENST00000635786 KRTAP4-7Q9BYR0 210 aa4.1□□□□□ -1.75
CACNA1A-217ENST00000635786 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
CACNA1A-217ENST00000635786 LCE3AQ5TA76 89 aa4.08□□□□□ -1.76
CACNA1A-217ENST00000635786 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
CACNA1A-217ENST00000635786 LCE3DQ9BYE3 92 aa4.03□□□□□ -1.76
CACNA1A-217ENST00000635786 SPRR2GQ9BYE4 73 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms