RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SPINK7P58062 85 aa4.49□□□□□ -1.69
GPC3-204ENST00000631057 SPTSSBQ8NFR3 76 aa4.49□□□□□ -1.69
GPC3-204ENST00000631057 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
GPC3-204ENST00000631057 RYR3Q15413 4870 aa4.48□□□□□ -1.69
GPC3-204ENST00000631057 C7orf65Q6ZTY9 151 aa4.48□□□□□ -1.69
GPC3-204ENST00000631057 DYNC1H1Q14204 4646 aaKnown RBP4.47□□□□□ -1.69
GPC3-204ENST00000631057 PKHD1L1Q86WI1 4243 aa4.47□□□□□ -1.69
GPC3-204ENST00000631057 A0A1B0GU69 56 aa4.46□□□□□ -1.7
GPC3-204ENST00000631057 SMR3BP02814 79 aaPredicted RBP4.45□□□□□ -1.7
GPC3-204ENST00000631057 LCE5AQ5TCM9 118 aa4.45□□□□□ -1.7
GPC3-204ENST00000631057 A6NN06 94 aa4.44□□□□□ -1.7
GPC3-204ENST00000631057 APOBP04114 4563 aaKnown RBP4.43□□□□□ -1.7
GPC3-204ENST00000631057 KRTAP10-4P60372 401 aaPredicted RBP4.43□□□□□ -1.7
GPC3-204ENST00000631057 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
GPC3-204ENST00000631057 KRTAP9-8Q9BYQ0 159 aa4.43□□□□□ -1.7
GPC3-204ENST00000631057 A8MUU9 505 aa4.42□□□□□ -1.7
GPC3-204ENST00000631057 C20orf166-AS1Q96NR2 134 aa4.42□□□□□ -1.7
GPC3-204ENST00000631057 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
GPC3-204ENST00000631057 FAT1Q14517 4588 aa4.39□□□□□ -1.71
GPC3-204ENST00000631057 Q8N1X5 172 aa4.39□□□□□ -1.71
GPC3-204ENST00000631057 UQCR11O14957 56 aa4.38□□□□□ -1.71
GPC3-204ENST00000631057 SPATA8Q6RVD6 105 aa4.38□□□□□ -1.71
GPC3-204ENST00000631057 FLG2Q5D862 2391 aaPredicted RBP4.36□□□□□ -1.71
GPC3-204ENST00000631057 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
GPC3-204ENST00000631057 MIR22HGQ0VDD5 57 aa4.36□□□□□ -1.71
GPC3-204ENST00000631057 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
GPC3-204ENST00000631057 TNXBP22105 4242 aa4.28□□□□□ -1.72
GPC3-204ENST00000631057 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
GPC3-204ENST00000631057 COX6B2Q6YFQ2 88 aa4.27□□□□□ -1.73
GPC3-204ENST00000631057 RBM12B-AS1Q9P1G2 102 aa4.27□□□□□ -1.73
GPC3-204ENST00000631057 FAT3Q8TDW7 4589 aa4.27□□□□□ -1.73
GPC3-204ENST00000631057 Q5VSD8 79 aa4.27□□□□□ -1.73
GPC3-204ENST00000631057 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
GPC3-204ENST00000631057 BIRC6Q9NR09 4857 aa4.26□□□□□ -1.73
GPC3-204ENST00000631057 HSPG2P98160 4391 aa4.24□□□□□ -1.73
GPC3-204ENST00000631057 DMBT1Q9UGM3 2413 aaPredicted RBP4.23□□□□□ -1.73
GPC3-204ENST00000631057 A0A1B0GU33 70 aa4.23□□□□□ -1.73
GPC3-204ENST00000631057 RPL37P61927 97 aaKnown RBP4.23□□□□□ -1.73
GPC3-204ENST00000631057 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
GPC3-204ENST00000631057 RYR1P21817 5038 aa4.21□□□□□ -1.73
GPC3-204ENST00000631057 H0YAA0 97 aa4.21□□□□□ -1.74
GPC3-204ENST00000631057 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
GPC3-204ENST00000631057 LRP1Q07954 4544 aaKnown RBP4.2□□□□□ -1.74
GPC3-204ENST00000631057 KIAA1109Q2LD37 5005 aa4.2□□□□□ -1.74
GPC3-204ENST00000631057 ADM2Q7Z4H4 148 aa4.17□□□□□ -1.74
GPC3-204ENST00000631057 HERC2O95714 4834 aa4.15□□□□□ -1.74
GPC3-204ENST00000631057 S4R3F8 94 aa4.14□□□□□ -1.75
GPC3-204ENST00000631057 MT1HL1P0DM35 61 aa4.13□□□□□ -1.75
GPC3-204ENST00000631057 K7ERS5 55 aa4.12□□□□□ -1.75
GPC3-204ENST00000631057 CSAG1Q6PB30 78 aa4.1□□□□□ -1.75
GPC3-204ENST00000631057 MYCBP2O75592 4640 aa4.08□□□□□ -1.76
GPC3-204ENST00000631057 KRTAP10-6P60371 365 aaPredicted RBP4.08□□□□□ -1.76
GPC3-204ENST00000631057 LINC01554Q52M75 96 aa4.08□□□□□ -1.76
GPC3-204ENST00000631057 TPRXLQ17RH7 258 aa4.07□□□□□ -1.76
GPC3-204ENST00000631057 ABCA13Q86UQ4 5058 aa4.06□□□□□ -1.76
GPC3-204ENST00000631057 CAMK2N1Q7Z7J9 78 aa4.06□□□□□ -1.76
GPC3-204ENST00000631057 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
GPC3-204ENST00000631057 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
GPC3-204ENST00000631057 KRTAP13-4Q3LI77 160 aa4.02□□□□□ -1.77
GPC3-204ENST00000631057 PCLOQ9Y6V0 5065 aa4.01□□□□□ -1.77
GPC3-204ENST00000631057 P0C880 135 aa4□□□□□ -1.77
GPC3-204ENST00000631057 A0A0D9SG42 100 aa3.99□□□□□ -1.77
GPC3-204ENST00000631057 ROMO1P60602 79 aa3.99□□□□□ -1.77
GPC3-204ENST00000631057 LRP2P98164 4655 aa3.96□□□□□ -1.78
GPC3-204ENST00000631057 M0QZ58 72 aa3.93□□□□□ -1.78
GPC3-204ENST00000631057 LPAP08519 4548 aa3.9□□□□□ -1.79
GPC3-204ENST00000631057 KRTAP12-2P59991 146 aa3.89□□□□□ -1.79
GPC3-204ENST00000631057 CRIPTQ9P021 101 aa3.89□□□□□ -1.79
GPC3-204ENST00000631057 KRTAP12-1P59990 96 aa3.89□□□□□ -1.79
GPC3-204ENST00000631057 SPINT4Q6UDR6 99 aa3.87□□□□□ -1.79
GPC3-204ENST00000631057 HERC1Q15751 4861 aa3.86□□□□□ -1.79
GPC3-204ENST00000631057 MUC17Q685J3 4493 aa3.86□□□□□ -1.79
GPC3-204ENST00000631057 LUZP6Q538Z0 58 aa3.83□□□□□ -1.8
GPC3-204ENST00000631057 R4GN34 69 aa3.81□□□□□ -1.8
GPC3-204ENST00000631057 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
GPC3-204ENST00000631057 HMCN2Q8NDA2 5059 aa3.8□□□□□ -1.8
GPC3-204ENST00000631057 C10orf95Q9H7T3 257 aa3.78□□□□□ -1.8
GPC3-204ENST00000631057 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
GPC3-204ENST00000631057 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
GPC3-204ENST00000631057 UBR4Q5T4S7 5183 aa3.65□□□□□ -1.82
GPC3-204ENST00000631057 PP632Q6XCG6 107 aa3.59□□□□□ -1.84
GPC3-204ENST00000631057 RNF213Q63HN8 5207 aa3.58□□□□□ -1.84
GPC3-204ENST00000631057 MUC2Q02817 5179 aa3.55□□□□□ -1.84
GPC3-204ENST00000631057 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
GPC3-204ENST00000631057 TNP1P09430 55 aa3.5□□□□□ -1.85
GPC3-204ENST00000631057 SPRR2GQ9BYE4 73 aa3.49□□□□□ -1.85
GPC3-204ENST00000631057 MT3P25713 68 aa3.48□□□□□ -1.85
GPC3-204ENST00000631057 M0R2T5 61 aa3.46□□□□□ -1.85
GPC3-204ENST00000631057 MT1HP80294 61 aa3.45□□□□□ -1.86
GPC3-204ENST00000631057 FAT4Q6V0I7 4981 aa3.43□□□□□ -1.86
GPC3-204ENST00000631057 MT2AP02795 61 aa3.39□□□□□ -1.87
GPC3-204ENST00000631057 KRTAP10-10P60014 251 aa3.39□□□□□ -1.87
GPC3-204ENST00000631057 LCE1AQ5T7P2 110 aa3.38□□□□□ -1.87
GPC3-204ENST00000631057 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
GPC3-204ENST00000631057 MT1FP04733 61 aa3.38□□□□□ -1.87
GPC3-204ENST00000631057 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
GPC3-204ENST00000631057 SPRR5A0A1B0GTR4 108 aa3.29□□□□□ -1.88
GPC3-204ENST00000631057 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
GPC3-204ENST00000631057 MT1BP07438 61 aa3.27□□□□□ -1.89
GPC3-204ENST00000631057 MT1XP80297 61 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms