RNA–Protein interactions for RNA: ENST00000629277.1

MECP2-218, Transcript of methyl-CpG binding protein 2, humanhuman

Gene MECP2, Length 2,558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-218ENST00000629277 DMBT1Q9UGM3 2413 aaPredicted RBP9.74□□□□□ -0.85
MECP2-218ENST00000629277 A0A1B0GVY2 172 aa9.69□□□□□ -0.86
MECP2-218ENST00000629277 KRTAP3-3Q9BYR6 98 aa9.69□□□□□ -0.86
MECP2-218ENST00000629277 KRTAP13-4Q3LI77 160 aa9.68□□□□□ -0.86
MECP2-218ENST00000629277 K7ERS5 55 aa9.67□□□□□ -0.86
MECP2-218ENST00000629277 KRTAP10-6P60371 365 aaPredicted RBP9.67□□□□□ -0.86
MECP2-218ENST00000629277 TNXBP22105 4242 aa9.66□□□□□ -0.86
MECP2-218ENST00000629277 A0A0D9SG42 100 aa9.66□□□□□ -0.86
MECP2-218ENST00000629277 P0C880 135 aa9.64□□□□□ -0.87
MECP2-218ENST00000629277 KRTAP10-8P60410 259 aa9.63□□□□□ -0.87
MECP2-218ENST00000629277 KMT2CQ8NEZ4 4911 aaKnown RBP9.61□□□□□ -0.87
MECP2-218ENST00000629277 RYR2Q92736 4967 aa9.59□□□□□ -0.87
MECP2-218ENST00000629277 KRTAP3-2Q9BYR7 98 aa9.58□□□□□ -0.88
MECP2-218ENST00000629277 RPL37P61927 97 aaKnown RBP9.56□□□□□ -0.88
MECP2-218ENST00000629277 LPAP08519 4548 aa9.52□□□□□ -0.89
MECP2-218ENST00000629277 S4R3F8 94 aa9.49□□□□□ -0.89
MECP2-218ENST00000629277 XP32Q5T750 250 aa9.47□□□□□ -0.89
MECP2-218ENST00000629277 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
MECP2-218ENST00000629277 C10orf95Q9H7T3 257 aa9.44□□□□□ -0.9
MECP2-218ENST00000629277 KRTAP12-2P59991 146 aa9.37□□□□□ -0.91
MECP2-218ENST00000629277 Q5VSD8 79 aa9.35□□□□□ -0.91
MECP2-218ENST00000629277 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
MECP2-218ENST00000629277 LRP2P98164 4655 aa9.31□□□□□ -0.92
MECP2-218ENST00000629277 NDUFAF8A1L188 74 aa9.3□□□□□ -0.92
MECP2-218ENST00000629277 SPINT4Q6UDR6 99 aa9.28□□□□□ -0.92
MECP2-218ENST00000629277 RYR1P21817 5038 aa9.24□□□□□ -0.93
MECP2-218ENST00000629277 RYR3Q15413 4870 aa9.23□□□□□ -0.93
MECP2-218ENST00000629277 KRTAP12-1P59990 96 aa9.22□□□□□ -0.93
MECP2-218ENST00000629277 KIAA1109Q2LD37 5005 aa9.2□□□□□ -0.94
MECP2-218ENST00000629277 KRTAP15-1Q3LI76 137 aa9.16□□□□□ -0.94
MECP2-218ENST00000629277 MT1HL1P0DM35 61 aa9.14□□□□□ -0.95
MECP2-218ENST00000629277 KRTAP21-3Q3LHN1 58 aa9.13□□□□□ -0.95
MECP2-218ENST00000629277 ABCA13Q86UQ4 5058 aa9.06□□□□□ -0.96
MECP2-218ENST00000629277 LUZP6Q538Z0 58 aa9.06□□□□□ -0.96
MECP2-218ENST00000629277 M0QZ58 72 aa9□□□□□ -0.97
MECP2-218ENST00000629277 SEC61BP60468 96 aaKnown RBP8.89□□□□□ -0.99
MECP2-218ENST00000629277 EPPK1P58107 5090 aaKnown RBP8.89□□□□□ -0.99
MECP2-218ENST00000629277 R4GN34 69 aa8.85□□□□□ -0.99
MECP2-218ENST00000629277 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
MECP2-218ENST00000629277 MUC17Q685J3 4493 aa8.78□□□□□ -1
MECP2-218ENST00000629277 KRTAP4-5Q9BYR2 181 aa8.71□□□□□ -1.02
MECP2-218ENST00000629277 KRTAP4-1Q9BYQ7 146 aa8.67□□□□□ -1.02
MECP2-218ENST00000629277 MUC2Q02817 5179 aa8.65□□□□□ -1.03
MECP2-218ENST00000629277 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
MECP2-218ENST00000629277 KRTAP19-2Q3LHN2 52 aa8.47□□□□□ -1.05
MECP2-218ENST00000629277 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
MECP2-218ENST00000629277 HERC2O95714 4834 aa8.38□□□□□ -1.07
MECP2-218ENST00000629277 J3QL48 77 aa8.31□□□□□ -1.08
MECP2-218ENST00000629277 PCLOQ9Y6V0 5065 aa8.31□□□□□ -1.08
MECP2-218ENST00000629277 FLGP20930 4061 aaPredicted RBP8.27□□□□□ -1.09
MECP2-218ENST00000629277 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
MECP2-218ENST00000629277 FAT4Q6V0I7 4981 aa8.19□□□□□ -1.1
MECP2-218ENST00000629277 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
MECP2-218ENST00000629277 HERC1Q15751 4861 aa8.11□□□□□ -1.11
MECP2-218ENST00000629277 TNP1P09430 55 aa8.09□□□□□ -1.12
MECP2-218ENST00000629277 HMCN2Q8NDA2 5059 aa7.94□□□□□ -1.14
MECP2-218ENST00000629277 PRO2289Q9P1D8 64 aa7.93□□□□□ -1.14
MECP2-218ENST00000629277 LCE2CQ5TA81 110 aa7.87□□□□□ -1.15
MECP2-218ENST00000629277 KRTAP23-1A1A580 65 aa7.87□□□□□ -1.15
MECP2-218ENST00000629277 SPRR5A0A1B0GTR4 108 aa7.86□□□□□ -1.15
MECP2-218ENST00000629277 RNF213Q63HN8 5207 aa7.84□□□□□ -1.15
MECP2-218ENST00000629277 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
MECP2-218ENST00000629277 SPRR2GQ9BYE4 73 aa7.8□□□□□ -1.16
MECP2-218ENST00000629277 LCE3AQ5TA76 89 aa7.74□□□□□ -1.17
MECP2-218ENST00000629277 M0R2T5 61 aa7.73□□□□□ -1.17
MECP2-218ENST00000629277 UBR4Q5T4S7 5183 aa7.72□□□□□ -1.17
MECP2-218ENST00000629277 MT1FP04733 61 aa7.63□□□□□ -1.19
MECP2-218ENST00000629277 MT1HP80294 61 aa7.63□□□□□ -1.19
MECP2-218ENST00000629277 INE1O15225 51 aa7.61□□□□□ -1.19
MECP2-218ENST00000629277 KRTAP10-10P60014 251 aa7.6□□□□□ -1.19
MECP2-218ENST00000629277 MT2AP02795 61 aa7.58□□□□□ -1.2
MECP2-218ENST00000629277 KRTAP9-8Q9BYQ0 159 aa7.5□□□□□ -1.21
MECP2-218ENST00000629277 KRTAP8-1Q8IUC2 63 aa7.43□□□□□ -1.22
MECP2-218ENST00000629277 KRTAP10-5P60370 271 aa7.43□□□□□ -1.22
MECP2-218ENST00000629277 MT1XP80297 61 aa7.4□□□□□ -1.22
MECP2-218ENST00000629277 MT1BP07438 61 aa7.39□□□□□ -1.23
MECP2-218ENST00000629277 KRTAP19-8Q3LI54 63 aa7.38□□□□□ -1.23
MECP2-218ENST00000629277 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
MECP2-218ENST00000629277 KRTAP10-12P60413 245 aa7.3□□□□□ -1.24
MECP2-218ENST00000629277 KRTAP10-7P60409 375 aaPredicted RBP7.28□□□□□ -1.24
MECP2-218ENST00000629277 KRTAP9-3Q9BYQ3 159 aa7.15□□□□□ -1.26
MECP2-218ENST00000629277 USH2AO75445 5202 aa7.14□□□□□ -1.27
MECP2-218ENST00000629277 KMT2DO14686 5537 aa7.13□□□□□ -1.27
MECP2-218ENST00000629277 KRTAP19-5Q3LI72 72 aa6.98□□□□□ -1.29
MECP2-218ENST00000629277 LCE2BO14633 110 aa6.89□□□□□ -1.31
MECP2-218ENST00000629277 LCE3CQ5T5A8 94 aa6.88□□□□□ -1.31
MECP2-218ENST00000629277 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
MECP2-218ENST00000629277 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
MECP2-218ENST00000629277 KRTAP9-6A8MVA2 160 aa6.78□□□□□ -1.32
MECP2-218ENST00000629277 KRTAP4-7Q9BYR0 210 aa6.69□□□□□ -1.34
MECP2-218ENST00000629277 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
MECP2-218ENST00000629277 LCE2AQ5TA79 106 aaPredicted RBP6.49□□□□□ -1.37
MECP2-218ENST00000629277 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
MECP2-218ENST00000629277 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
MECP2-218ENST00000629277 KRTAP2-1Q9BYU5 128 aa6.48□□□□□ -1.37
MECP2-218ENST00000629277 MT1LQ93083 61 aa6.4□□□□□ -1.39
MECP2-218ENST00000629277 FSIP2Q5CZC0 6907 aa6.37□□□□□ -1.39
MECP2-218ENST00000629277 MT1EP04732 61 aa6.36□□□□□ -1.39
MECP2-218ENST00000629277 SSPOA2VEC9 5147 aa6.33□□□□□ -1.4
MECP2-218ENST00000629277 LOC100996750A0A140TA64 210 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms