RNA–Protein interactions for RNA: ENST00000627960.1

UBR1-212, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5 BASIC

Gene UBR1, Length 189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-212ENST00000627960 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
UBR1-212ENST00000627960 ATP5EP2Q5VTU8 51 aa5.34□□□□□ -1.55
UBR1-212ENST00000627960 CRIPTQ9P021 101 aa5.34□□□□□ -1.55
UBR1-212ENST00000627960 UQCRQO14949 82 aa5.33□□□□□ -1.56
UBR1-212ENST00000627960 HIST1H4AP62805 103 aaKnown RBP5.33□□□□□ -1.56
UBR1-212ENST00000627960 IMUPQ9GZP8 106 aa5.32□□□□□ -1.56
UBR1-212ENST00000627960 H0Y9P7 68 aa5.31□□□□□ -1.56
UBR1-212ENST00000627960 ATOX1O00244 68 aa5.31□□□□□ -1.56
UBR1-212ENST00000627960 NEBP20929 6669 aa5.3□□□□□ -1.56
UBR1-212ENST00000627960 NDUFC1O43677 76 aa5.28□□□□□ -1.56
UBR1-212ENST00000627960 H0YAA0 97 aa5.27□□□□□ -1.57
UBR1-212ENST00000627960 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
UBR1-212ENST00000627960 A8MUN3 132 aa5.24□□□□□ -1.57
UBR1-212ENST00000627960 LINC00643Q86TS7 51 aa5.24□□□□□ -1.57
UBR1-212ENST00000627960 LINC00208Q96KT6 92 aa5.22□□□□□ -1.57
UBR1-212ENST00000627960 ADM2Q7Z4H4 148 aa5.21□□□□□ -1.58
UBR1-212ENST00000627960 KRTAP5-9P26371 169 aa5.19□□□□□ -1.58
UBR1-212ENST00000627960 OCR1Q9BZK8 76 aa5.19□□□□□ -1.58
UBR1-212ENST00000627960 MP68P56378 58 aa5.18□□□□□ -1.58
UBR1-212ENST00000627960 KMT2DO14686 5537 aa5.14□□□□□ -1.59
UBR1-212ENST00000627960 H3BPC8 53 aa5.1□□□□□ -1.59
UBR1-212ENST00000627960 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
UBR1-212ENST00000627960 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
UBR1-212ENST00000627960 MT1XP80297 61 aa5.09□□□□□ -1.59
UBR1-212ENST00000627960 PLAC4Q8WY50 150 aa5.09□□□□□ -1.59
UBR1-212ENST00000627960 MDN1Q9NU22 5596 aa5.07□□□□□ -1.6
UBR1-212ENST00000627960 P0C880 135 aa5.07□□□□□ -1.6
UBR1-212ENST00000627960 C20orf197Q8N268 126 aa5.07□□□□□ -1.6
UBR1-212ENST00000627960 DMAC1Q96GE9 116 aa5.07□□□□□ -1.6
UBR1-212ENST00000627960 R4GN34 69 aa5.07□□□□□ -1.6
UBR1-212ENST00000627960 J3QR89 54 aa5.05□□□□□ -1.6
UBR1-212ENST00000627960 SCGB1A1P11684 91 aa5.04□□□□□ -1.6
UBR1-212ENST00000627960 KRTAP3-2Q9BYR7 98 aa5.04□□□□□ -1.6
UBR1-212ENST00000627960 M0QZ58 72 aa5.03□□□□□ -1.6
UBR1-212ENST00000627960 K7ERU9 68 aa5.02□□□□□ -1.61
UBR1-212ENST00000627960 SPRR2FQ96RM1 72 aa5.01□□□□□ -1.61
UBR1-212ENST00000627960 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
UBR1-212ENST00000627960 TRAV7A0A075B6U4 112 aa4.97□□□□□ -1.61
UBR1-212ENST00000627960 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
UBR1-212ENST00000627960 KRTAP2-3P0C7H8 128 aa4.96□□□□□ -1.62
UBR1-212ENST00000627960 SPRR2EP22531 72 aa4.96□□□□□ -1.62
UBR1-212ENST00000627960 SPRR2BP35325 72 aa4.96□□□□□ -1.62
UBR1-212ENST00000627960 SPRR2AP35326 72 aa4.96□□□□□ -1.62
UBR1-212ENST00000627960 KRTAP2-4Q9BYR9 128 aa4.96□□□□□ -1.62
UBR1-212ENST00000627960 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
UBR1-212ENST00000627960 MT-ATP8P03928 68 aa4.94□□□□□ -1.62
UBR1-212ENST00000627960 ACYP2P14621 99 aa4.94□□□□□ -1.62
UBR1-212ENST00000627960 KRTAP4-8A0A0G2JLE6 195 aa4.9□□□□□ -1.63
UBR1-212ENST00000627960 KRTAP4-8Q9BYQ9 185 aa4.9□□□□□ -1.63
UBR1-212ENST00000627960 LCE1AQ5T7P2 110 aa4.89□□□□□ -1.63
UBR1-212ENST00000627960 SMIM20Q8N5G0 67 aa4.89□□□□□ -1.63
UBR1-212ENST00000627960 SPTSSBQ8NFR3 76 aa4.89□□□□□ -1.63
UBR1-212ENST00000627960 KRTAP10-7P60409 375 aaPredicted RBP4.86□□□□□ -1.63
UBR1-212ENST00000627960 KRTAP10-12P60413 245 aa4.84□□□□□ -1.63
UBR1-212ENST00000627960 CHKB-CPT1BH3BT56 60 aa4.83□□□□□ -1.64
UBR1-212ENST00000627960 SPRR2DP22532 72 aa4.8□□□□□ -1.64
UBR1-212ENST00000627960 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
UBR1-212ENST00000627960 KRTAP2-1Q9BYU5 128 aa4.8□□□□□ -1.64
UBR1-212ENST00000627960 SNURFQ9Y675 71 aa4.79□□□□□ -1.64
UBR1-212ENST00000627960 SPANXA2-OT1Q8N9U9 137 aa4.75□□□□□ -1.65
UBR1-212ENST00000627960 KRTAP13-4Q3LI77 160 aa4.71□□□□□ -1.66
UBR1-212ENST00000627960 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
UBR1-212ENST00000627960 LCE3BQ5TA77 95 aa4.67□□□□□ -1.66
UBR1-212ENST00000627960 CAMK2N1Q7Z7J9 78 aa4.66□□□□□ -1.66
UBR1-212ENST00000627960 COA5Q86WW8 74 aa4.62□□□□□ -1.67
UBR1-212ENST00000627960 COX7CP15954 63 aa4.6□□□□□ -1.67
UBR1-212ENST00000627960 ANAPC13Q9BS18 74 aa4.58□□□□□ -1.68
UBR1-212ENST00000627960 SEC61GP60059 68 aa4.57□□□□□ -1.68
UBR1-212ENST00000627960 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
UBR1-212ENST00000627960 KRTAP19-7Q3SYF9 63 aa4.56□□□□□ -1.68
UBR1-212ENST00000627960 CYSTM1Q9H1C7 97 aa4.56□□□□□ -1.68
UBR1-212ENST00000627960 A0A0D9SG42 100 aa4.55□□□□□ -1.68
UBR1-212ENST00000627960 CCDC179H3BU77 68 aa4.53□□□□□ -1.68
UBR1-212ENST00000627960 SPATA8Q6RVD6 105 aa4.53□□□□□ -1.68
UBR1-212ENST00000627960 LCE5AQ5TCM9 118 aa4.52□□□□□ -1.69
UBR1-212ENST00000627960 A0A1B0GU33 70 aa4.51□□□□□ -1.69
UBR1-212ENST00000627960 MT1EP04732 61 aa4.51□□□□□ -1.69
UBR1-212ENST00000627960 SPINT4Q6UDR6 99 aa4.5□□□□□ -1.69
UBR1-212ENST00000627960 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
UBR1-212ENST00000627960 H7BZZ5 65 aa4.48□□□□□ -1.69
UBR1-212ENST00000627960 KRTAP12-1P59990 96 aa4.47□□□□□ -1.69
UBR1-212ENST00000627960 KRTAP19-5Q3LI72 72 aa4.42□□□□□ -1.7
UBR1-212ENST00000627960 DSTQ03001 7570 aaKnown RBP4.41□□□□□ -1.7
UBR1-212ENST00000627960 A0A1B0GU69 56 aa4.39□□□□□ -1.71
UBR1-212ENST00000627960 MT1GP13640 62 aa4.39□□□□□ -1.71
UBR1-212ENST00000627960 SMIM26A0A096LP01 95 aa4.38□□□□□ -1.71
UBR1-212ENST00000627960 KRTAP4-9Q9BYQ8 210 aa4.37□□□□□ -1.71
UBR1-212ENST00000627960 PCP4P48539 62 aa4.36□□□□□ -1.71
UBR1-212ENST00000627960 A8MU10 97 aa4.35□□□□□ -1.71
UBR1-212ENST00000627960 PP632Q6XCG6 107 aa4.34□□□□□ -1.71
UBR1-212ENST00000627960 TMEM258P61165 79 aa4.32□□□□□ -1.72
UBR1-212ENST00000627960 MT1MQ8N339 61 aa4.31□□□□□ -1.72
UBR1-212ENST00000627960 GPR98Q8WXG9 6306 aa4.31□□□□□ -1.72
UBR1-212ENST00000627960 MT1LQ93083 61 aa4.3□□□□□ -1.72
UBR1-212ENST00000627960 ATP5EP56381 51 aaPredicted RBP4.29□□□□□ -1.72
UBR1-212ENST00000627960 C10orf95Q9H7T3 257 aa4.29□□□□□ -1.72
UBR1-212ENST00000627960 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
UBR1-212ENST00000627960 TNP1P09430 55 aa4.27□□□□□ -1.73
UBR1-212ENST00000627960 LCE1DQ5T752 114 aa4.25□□□□□ -1.73
UBR1-212ENST00000627960 LCE4AQ5TA78 99 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms