RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
UBE3A-209ENST00000625778 KRTAP13-4Q3LI77 160 aa7.23□□□□□ -1.25
UBE3A-209ENST00000625778 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
UBE3A-209ENST00000625778 KRTAP10-6P60371 365 aaPredicted RBP7.16□□□□□ -1.26
UBE3A-209ENST00000625778 LRP1Q07954 4544 aaKnown RBP7.13□□□□□ -1.27
UBE3A-209ENST00000625778 LUZP6Q538Z0 58 aa7.12□□□□□ -1.27
UBE3A-209ENST00000625778 S4R3F8 94 aa7.11□□□□□ -1.27
UBE3A-209ENST00000625778 KRTAP10-8P60410 259 aa7.11□□□□□ -1.27
UBE3A-209ENST00000625778 KRTAP15-1Q3LI76 137 aa7.11□□□□□ -1.27
UBE3A-209ENST00000625778 KRTAP3-3Q9BYR6 98 aa7.11□□□□□ -1.27
UBE3A-209ENST00000625778 HSPG2P98160 4391 aa7.08□□□□□ -1.28
UBE3A-209ENST00000625778 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
UBE3A-209ENST00000625778 APOBP04114 4563 aaKnown RBP7.06□□□□□ -1.28
UBE3A-209ENST00000625778 KRTAP12-2P59991 146 aa7.03□□□□□ -1.28
UBE3A-209ENST00000625778 PKHD1L1Q86WI1 4243 aa7.03□□□□□ -1.28
UBE3A-209ENST00000625778 KRTAP10-4P60372 401 aaPredicted RBP7.01□□□□□ -1.29
UBE3A-209ENST00000625778 FAT3Q8TDW7 4589 aa6.99□□□□□ -1.29
UBE3A-209ENST00000625778 XP32Q5T750 250 aa6.95□□□□□ -1.3
UBE3A-209ENST00000625778 KRTAP12-1P59990 96 aa6.89□□□□□ -1.31
UBE3A-209ENST00000625778 A0A1B0GVY2 172 aa6.89□□□□□ -1.31
UBE3A-209ENST00000625778 LPAP08519 4548 aa6.89□□□□□ -1.31
UBE3A-209ENST00000625778 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
UBE3A-209ENST00000625778 Q5VSD8 79 aa6.84□□□□□ -1.31
UBE3A-209ENST00000625778 TNXBP22105 4242 aa6.83□□□□□ -1.32
UBE3A-209ENST00000625778 LRP2P98164 4655 aa6.79□□□□□ -1.32
UBE3A-209ENST00000625778 M0QZ58 72 aa6.78□□□□□ -1.32
UBE3A-209ENST00000625778 RYR2Q92736 4967 aa6.74□□□□□ -1.33
UBE3A-209ENST00000625778 PLAC4Q8WY50 150 aa6.72□□□□□ -1.33
UBE3A-209ENST00000625778 R4GN34 69 aa6.71□□□□□ -1.34
UBE3A-209ENST00000625778 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.34
UBE3A-209ENST00000625778 KRTAP17-1Q9BYP8 105 aa6.61□□□□□ -1.35
UBE3A-209ENST00000625778 RYR1P21817 5038 aa6.61□□□□□ -1.35
UBE3A-209ENST00000625778 RYR3Q15413 4870 aa6.59□□□□□ -1.36
UBE3A-209ENST00000625778 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
UBE3A-209ENST00000625778 LORP23490 312 aaPredicted RBP6.55□□□□□ -1.36
UBE3A-209ENST00000625778 SEC61BP60468 96 aaKnown RBP6.52□□□□□ -1.37
UBE3A-209ENST00000625778 ABCA13Q86UQ4 5058 aa6.49□□□□□ -1.37
UBE3A-209ENST00000625778 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
UBE3A-209ENST00000625778 KRTAP21-3Q3LHN1 58 aa6.35□□□□□ -1.39
UBE3A-209ENST00000625778 MUC2Q02817 5179 aa6.31□□□□□ -1.4
UBE3A-209ENST00000625778 EPPK1P58107 5090 aaKnown RBP6.29□□□□□ -1.4
UBE3A-209ENST00000625778 KRTAP4-1Q9BYQ7 146 aa6.29□□□□□ -1.4
UBE3A-209ENST00000625778 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
UBE3A-209ENST00000625778 MUC17Q685J3 4493 aa6.22□□□□□ -1.41
UBE3A-209ENST00000625778 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
UBE3A-209ENST00000625778 J3QL48 77 aa6.18□□□□□ -1.42
UBE3A-209ENST00000625778 TNP1P09430 55 aa6.12□□□□□ -1.43
UBE3A-209ENST00000625778 HERC2O95714 4834 aa6.02□□□□□ -1.44
UBE3A-209ENST00000625778 FAT4Q6V0I7 4981 aa5.98□□□□□ -1.45
UBE3A-209ENST00000625778 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
UBE3A-209ENST00000625778 PCLOQ9Y6V0 5065 aa5.96□□□□□ -1.46
UBE3A-209ENST00000625778 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
UBE3A-209ENST00000625778 PRO2289Q9P1D8 64 aa5.91□□□□□ -1.46
UBE3A-209ENST00000625778 M0R2T5 61 aa5.86□□□□□ -1.47
UBE3A-209ENST00000625778 HERC1Q15751 4861 aa5.85□□□□□ -1.47
UBE3A-209ENST00000625778 LCE3AQ5TA76 89 aa5.8□□□□□ -1.48
UBE3A-209ENST00000625778 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
UBE3A-209ENST00000625778 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
UBE3A-209ENST00000625778 BIRC6Q9NR09 4857 aa5.74□□□□□ -1.49
UBE3A-209ENST00000625778 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
UBE3A-209ENST00000625778 HMCN2Q8NDA2 5059 aa5.69□□□□□ -1.5
UBE3A-209ENST00000625778 KRTAP19-1Q8IUB9 90 aa5.68□□□□□ -1.5
UBE3A-209ENST00000625778 KRTAP10-10P60014 251 aa5.67□□□□□ -1.5
UBE3A-209ENST00000625778 SPRR2GQ9BYE4 73 aa5.62□□□□□ -1.51
UBE3A-209ENST00000625778 UBR4Q5T4S7 5183 aa5.61□□□□□ -1.51
UBE3A-209ENST00000625778 LCE2CQ5TA81 110 aa5.58□□□□□ -1.52
UBE3A-209ENST00000625778 INE1O15225 51 aa5.57□□□□□ -1.52
UBE3A-209ENST00000625778 MT1FP04733 61 aa5.53□□□□□ -1.52
UBE3A-209ENST00000625778 MT2AP02795 61 aa5.48□□□□□ -1.53
UBE3A-209ENST00000625778 MT1HP80294 61 aa5.48□□□□□ -1.53
UBE3A-209ENST00000625778 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
UBE3A-209ENST00000625778 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
UBE3A-209ENST00000625778 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
UBE3A-209ENST00000625778 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
UBE3A-209ENST00000625778 MT1XP80297 61 aa5.38□□□□□ -1.55
UBE3A-209ENST00000625778 KRTAP10-7P60409 375 aaPredicted RBP5.36□□□□□ -1.55
UBE3A-209ENST00000625778 KRTAP9-8Q9BYQ0 159 aa5.35□□□□□ -1.55
UBE3A-209ENST00000625778 MT1BP07438 61 aa5.34□□□□□ -1.56
UBE3A-209ENST00000625778 KMT2DO14686 5537 aa5.33□□□□□ -1.56
UBE3A-209ENST00000625778 FSIP2Q5CZC0 6907 aa5.28□□□□□ -1.56
UBE3A-209ENST00000625778 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
UBE3A-209ENST00000625778 USH2AO75445 5202 aa5.27□□□□□ -1.57
UBE3A-209ENST00000625778 KRTAP19-5Q3LI72 72 aa5.18□□□□□ -1.58
UBE3A-209ENST00000625778 LCE3CQ5T5A8 94 aa5.1□□□□□ -1.59
UBE3A-209ENST00000625778 KRTAP9-3Q9BYQ3 159 aa5.09□□□□□ -1.59
UBE3A-209ENST00000625778 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
UBE3A-209ENST00000625778 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
UBE3A-209ENST00000625778 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
UBE3A-209ENST00000625778 KRTAP9-6A8MVA2 160 aa5□□□□□ -1.61
UBE3A-209ENST00000625778 LCE2BO14633 110 aa4.94□□□□□ -1.62
UBE3A-209ENST00000625778 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
UBE3A-209ENST00000625778 KRTAP19-7Q3SYF9 63 aa4.77□□□□□ -1.65
UBE3A-209ENST00000625778 KRTAP2-3P0C7H8 128 aa4.74□□□□□ -1.65
UBE3A-209ENST00000625778 KRTAP2-4Q9BYR9 128 aa4.74□□□□□ -1.65
UBE3A-209ENST00000625778 KRTAP2-1Q9BYU5 128 aa4.74□□□□□ -1.65
UBE3A-209ENST00000625778 CRCT1Q9UGL9 99 aa4.72□□□□□ -1.65
UBE3A-209ENST00000625778 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
UBE3A-209ENST00000625778 DSTQ03001 7570 aaKnown RBP4.67□□□□□ -1.66
UBE3A-209ENST00000625778 MT1LQ93083 61 aa4.67□□□□□ -1.66
UBE3A-209ENST00000625778 LOC100996750A0A140TA64 210 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms