RNA–Protein interactions for RNA: ENST00000623610.1

CDKL5-206, Transcript of cyclin dependent kinase like 5, humanhuman

Gene CDKL5, Length 2,130 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-206ENST00000623610 LINC00575Q6W349 94 aa4.6□□□□□ -1.67
CDKL5-206ENST00000623610 IGKV2D-24A0A075B6R9 120 aa4.59□□□□□ -1.67
CDKL5-206ENST00000623610 LINC01556Q5JQF7 62 aa4.58□□□□□ -1.68
CDKL5-206ENST00000623610 DNAH5Q8TE73 4624 aa4.58□□□□□ -1.68
CDKL5-206ENST00000623610 INE1O15225 51 aa4.58□□□□□ -1.68
CDKL5-206ENST00000623610 A0A1B0GVY2 172 aa4.57□□□□□ -1.68
CDKL5-206ENST00000623610 KIAA1109Q2LD37 5005 aa4.56□□□□□ -1.68
CDKL5-206ENST00000623610 LRP1BQ9NZR2 4599 aa4.56□□□□□ -1.68
CDKL5-206ENST00000623610 DYNC1H1Q14204 4646 aaKnown RBP4.56□□□□□ -1.68
CDKL5-206ENST00000623610 Q6ZRX8 168 aa4.56□□□□□ -1.68
CDKL5-206ENST00000623610 Q6ZRN7 208 aaPredicted RBP4.55□□□□□ -1.68
CDKL5-206ENST00000623610 CRIPTQ9P021 101 aa4.55□□□□□ -1.68
CDKL5-206ENST00000623610 KRTAP29-1A8MX34 341 aaPredicted RBP4.55□□□□□ -1.68
CDKL5-206ENST00000623610 APOBP04114 4563 aaKnown RBP4.5□□□□□ -1.69
CDKL5-206ENST00000623610 RYR1P21817 5038 aa4.5□□□□□ -1.69
CDKL5-206ENST00000623610 HSPG2P98160 4391 aa4.5□□□□□ -1.69
CDKL5-206ENST00000623610 PLAC4Q8WY50 150 aa4.49□□□□□ -1.69
CDKL5-206ENST00000623610 HERC2O95714 4834 aa4.49□□□□□ -1.69
CDKL5-206ENST00000623610 DEFB105AQ8NG35 78 aa4.47□□□□□ -1.69
CDKL5-206ENST00000623610 FAT1Q14517 4588 aa4.45□□□□□ -1.7
CDKL5-206ENST00000623610 KRTAP9-3Q9BYQ3 159 aa4.44□□□□□ -1.7
CDKL5-206ENST00000623610 DNAH8Q96JB1 4490 aa4.43□□□□□ -1.7
CDKL5-206ENST00000623610 KRTAP10-1P60331 282 aa4.43□□□□□ -1.7
CDKL5-206ENST00000623610 PCLOQ9Y6V0 5065 aa4.43□□□□□ -1.7
CDKL5-206ENST00000623610 SPRR1AP35321 89 aa4.43□□□□□ -1.7
CDKL5-206ENST00000623610 ANAPC11Q9NYG5 84 aa4.43□□□□□ -1.7
CDKL5-206ENST00000623610 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
CDKL5-206ENST00000623610 A0A096LNI7 61 aa4.42□□□□□ -1.7
CDKL5-206ENST00000623610 IGKV2-24A0A0C4DH68 120 aa4.42□□□□□ -1.7
CDKL5-206ENST00000623610 DSCR10P59022 87 aa4.41□□□□□ -1.7
CDKL5-206ENST00000623610 IGLV5-48A0A075B6I7 105 aa4.4□□□□□ -1.71
CDKL5-206ENST00000623610 IGFL1Q6UW32 110 aa4.39□□□□□ -1.71
CDKL5-206ENST00000623610 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
CDKL5-206ENST00000623610 VPS13BQ7Z7G8 4022 aa4.38□□□□□ -1.71
CDKL5-206ENST00000623610 SRRM2Q9UQ35 2752 aaKnown RBP4.37□□□□□ -1.71
CDKL5-206ENST00000623610 PRLHP81277 87 aa4.37□□□□□ -1.71
CDKL5-206ENST00000623610 SMR3BP02814 79 aaPredicted RBP4.36□□□□□ -1.71
CDKL5-206ENST00000623610 Q6ZSA8 131 aa4.36□□□□□ -1.71
CDKL5-206ENST00000623610 K7EQZ3 153 aa4.34□□□□□ -1.71
CDKL5-206ENST00000623610 MYCBP2O75592 4640 aa4.34□□□□□ -1.71
CDKL5-206ENST00000623610 KRTAP13-2Q52LG2 175 aa4.34□□□□□ -1.71
CDKL5-206ENST00000623610 PCOTHQ58A44 107 aa4.33□□□□□ -1.72
CDKL5-206ENST00000623610 Q5VSD8 79 aa4.32□□□□□ -1.72
CDKL5-206ENST00000623610 TP53AIP1Q9HCN2 124 aa4.32□□□□□ -1.72
CDKL5-206ENST00000623610 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-206ENST00000623610 LRP1Q07954 4544 aaKnown RBP4.28□□□□□ -1.72
CDKL5-206ENST00000623610 SPRR1BP22528 89 aa4.26□□□□□ -1.73
CDKL5-206ENST00000623610 KRTAP12-2P59991 146 aa4.26□□□□□ -1.73
CDKL5-206ENST00000623610 HERC1Q15751 4861 aa4.26□□□□□ -1.73
CDKL5-206ENST00000623610 KRTAP10-4P60372 401 aaPredicted RBP4.25□□□□□ -1.73
CDKL5-206ENST00000623610 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
CDKL5-206ENST00000623610 KRTAP13-1Q8IUC0 172 aa4.25□□□□□ -1.73
CDKL5-206ENST00000623610 DMBT1Q9UGM3 2413 aaPredicted RBP4.25□□□□□ -1.73
CDKL5-206ENST00000623610 H0YAA0 97 aa4.24□□□□□ -1.73
CDKL5-206ENST00000623610 PP632Q6XCG6 107 aa4.24□□□□□ -1.73
CDKL5-206ENST00000623610 FAT3Q8TDW7 4589 aa4.23□□□□□ -1.73
CDKL5-206ENST00000623610 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
CDKL5-206ENST00000623610 MRPL34Q9BQ48 92 aaKnown RBP4.21□□□□□ -1.74
CDKL5-206ENST00000623610 C10orf95Q9H7T3 257 aa4.21□□□□□ -1.74
CDKL5-206ENST00000623610 TNXBP22105 4242 aa4.16□□□□□ -1.74
CDKL5-206ENST00000623610 RPL37P61927 97 aaKnown RBP4.16□□□□□ -1.74
CDKL5-206ENST00000623610 MMP24-AS1A0A0U1RRL7 71 aa4.13□□□□□ -1.75
CDKL5-206ENST00000623610 SPINK6Q6UWN8 80 aa4.12□□□□□ -1.75
CDKL5-206ENST00000623610 KRTAP2-2Q9BYT5 123 aa4.12□□□□□ -1.75
CDKL5-206ENST00000623610 MT1HL1P0DM35 61 aa4.1□□□□□ -1.75
CDKL5-206ENST00000623610 KRTAP1-4P0C5Y4 121 aa4.09□□□□□ -1.76
CDKL5-206ENST00000623610 HMCN2Q8NDA2 5059 aa4.08□□□□□ -1.76
CDKL5-206ENST00000623610 COX6B2Q6YFQ2 88 aa4.07□□□□□ -1.76
CDKL5-206ENST00000623610 LRP2P98164 4655 aa4.02□□□□□ -1.77
CDKL5-206ENST00000623610 UBR4Q5T4S7 5183 aa4.02□□□□□ -1.77
CDKL5-206ENST00000623610 KRTAP13-3Q3SY46 172 aa4.01□□□□□ -1.77
CDKL5-206ENST00000623610 KRTAP13-4Q3LI77 160 aa4□□□□□ -1.77
CDKL5-206ENST00000623610 H1FX-AS1Q4G0G2 97 aa3.99□□□□□ -1.77
CDKL5-206ENST00000623610 LPAP08519 4548 aa3.99□□□□□ -1.77
CDKL5-206ENST00000623610 LCE1AQ5T7P2 110 aa3.97□□□□□ -1.77
CDKL5-206ENST00000623610 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
CDKL5-206ENST00000623610 SPINK1P00995 79 aa3.89□□□□□ -1.79
CDKL5-206ENST00000623610 LCE1FQ5T754 118 aa3.89□□□□□ -1.79
CDKL5-206ENST00000623610 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
CDKL5-206ENST00000623610 MUC2Q02817 5179 aa3.88□□□□□ -1.79
CDKL5-206ENST00000623610 RPS29P62273 56 aaKnown RBP3.83□□□□□ -1.8
CDKL5-206ENST00000623610 C9orf92A6NGG3 77 aa3.82□□□□□ -1.8
CDKL5-206ENST00000623610 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
CDKL5-206ENST00000623610 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
CDKL5-206ENST00000623610 MUC17Q685J3 4493 aa3.75□□□□□ -1.81
CDKL5-206ENST00000623610 FAT4Q6V0I7 4981 aa3.72□□□□□ -1.81
CDKL5-206ENST00000623610 KRTAP12-1P59990 96 aa3.69□□□□□ -1.82
CDKL5-206ENST00000623610 MT3P25713 68 aa3.67□□□□□ -1.82
CDKL5-206ENST00000623610 KRTAP4-1Q9BYQ7 146 aa3.66□□□□□ -1.82
CDKL5-206ENST00000623610 S4R3F8 94 aa3.65□□□□□ -1.82
CDKL5-206ENST00000623610 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.65□□□□□ -1.83
CDKL5-206ENST00000623610 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.84
CDKL5-206ENST00000623610 LCE1EQ5T753 118 aa3.57□□□□□ -1.84
CDKL5-206ENST00000623610 KRTAP19-2Q3LHN2 52 aa3.55□□□□□ -1.84
CDKL5-206ENST00000623610 FLGP20930 4061 aaPredicted RBP3.51□□□□□ -1.85
CDKL5-206ENST00000623610 A0A0D9SG42 100 aa3.5□□□□□ -1.85
CDKL5-206ENST00000623610 KRTAP10-10P60014 251 aa3.5□□□□□ -1.85
CDKL5-206ENST00000623610 MT1HP80294 61 aa3.49□□□□□ -1.85
CDKL5-206ENST00000623610 KRTAP6-3Q3LI67 103 aa3.48□□□□□ -1.85
CDKL5-206ENST00000623610 M0R2T5 61 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms