RNA–Protein interactions for RNA: ENST00000623073.3

ERCC6-209, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 11,026 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-209ENST00000623073 MUC3AQ02505 3323 aa2.29□□□□□ -2.04
ERCC6-209ENST00000623073 KRTAP12-4P60329 112 aa2.29□□□□□ -2.04
ERCC6-209ENST00000623073 KRTAP10-7P60409 375 aaPredicted RBP2.29□□□□□ -2.04
ERCC6-209ENST00000623073 CUBNO60494 3623 aa2.29□□□□□ -2.04
ERCC6-209ENST00000623073 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
ERCC6-209ENST00000623073 LRP1Q07954 4544 aaKnown RBP2.28□□□□□ -2.05
ERCC6-209ENST00000623073 SMG1Q96Q15 3661 aaKnown RBP2.27□□□□□ -2.05
ERCC6-209ENST00000623073 CRCT1Q9UGL9 99 aa2.26□□□□□ -2.05
ERCC6-209ENST00000623073 DMDP11532 3685 aa2.26□□□□□ -2.05
ERCC6-209ENST00000623073 SPENQ96T58 3664 aaKnown RBP2.26□□□□□ -2.05
ERCC6-209ENST00000623073 DNAH2Q9P225 4427 aa2.25□□□□□ -2.05
ERCC6-209ENST00000623073 LCE3EQ5T5B0 92 aa2.23□□□□□ -2.05
ERCC6-209ENST00000623073 KRTAP19-1Q8IUB9 90 aa2.23□□□□□ -2.05
ERCC6-209ENST00000623073 MT1HP80294 61 aa2.22□□□□□ -2.05
ERCC6-209ENST00000623073 MT1GP13640 62 aa2.21□□□□□ -2.06
ERCC6-209ENST00000623073 CSMD1Q96PZ7 3565 aa2.2□□□□□ -2.06
ERCC6-209ENST00000623073 LCE3DQ9BYE3 92 aa2.19□□□□□ -2.06
ERCC6-209ENST00000623073 MT1LQ93083 61 aa2.19□□□□□ -2.06
ERCC6-209ENST00000623073 RYR1P21817 5038 aa2.18□□□□□ -2.06
ERCC6-209ENST00000623073 MT1FP04733 61 aa2.18□□□□□ -2.06
ERCC6-209ENST00000623073 MT1XP80297 61 aa2.17□□□□□ -2.06
ERCC6-209ENST00000623073 MYCBP2O75592 4640 aa2.17□□□□□ -2.06
ERCC6-209ENST00000623073 DNAH1Q9P2D7 4330 aa2.16□□□□□ -2.06
ERCC6-209ENST00000623073 KRTAP4-1Q9BYQ7 146 aa2.16□□□□□ -2.06
ERCC6-209ENST00000623073 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.06
ERCC6-209ENST00000623073 ZNF469Q96JG9 3925 aaPredicted RBP2.15□□□□□ -2.07
ERCC6-209ENST00000623073 DNAH5Q8TE73 4624 aa2.15□□□□□ -2.07
ERCC6-209ENST00000623073 PLECQ15149 4684 aaKnown RBP2.15□□□□□ -2.07
ERCC6-209ENST00000623073 SVEP1Q4LDE5 3571 aa2.15□□□□□ -2.07
ERCC6-209ENST00000623073 VPS13CQ709C8 3753 aa2.14□□□□□ -2.07
ERCC6-209ENST00000623073 DYNC1H1Q14204 4646 aaKnown RBP2.13□□□□□ -2.07
ERCC6-209ENST00000623073 DNAH3Q8TD57 4116 aa2.13□□□□□ -2.07
ERCC6-209ENST00000623073 CSMD2Q7Z408 3487 aa2.13□□□□□ -2.07
ERCC6-209ENST00000623073 AKAP9Q99996 3911 aa2.11□□□□□ -2.07
ERCC6-209ENST00000623073 MT1EP04732 61 aa2.1□□□□□ -2.07
ERCC6-209ENST00000623073 BSNQ9UPA5 3926 aa2.1□□□□□ -2.07
ERCC6-209ENST00000623073 KRTAP2-3P0C7H8 128 aa2.1□□□□□ -2.07
ERCC6-209ENST00000623073 KRTAP2-4Q9BYR9 128 aa2.1□□□□□ -2.07
ERCC6-209ENST00000623073 KRTAP2-1Q9BYU5 128 aa2.1□□□□□ -2.07
ERCC6-209ENST00000623073 FAT1Q14517 4588 aa2.09□□□□□ -2.07
ERCC6-209ENST00000623073 MT1BP07438 61 aa2.08□□□□□ -2.08
ERCC6-209ENST00000623073 DNAH8Q96JB1 4490 aa2.08□□□□□ -2.08
ERCC6-209ENST00000623073 SPRR2AP35326 72 aa2.05□□□□□ -2.08
ERCC6-209ENST00000623073 SPRR2FQ96RM1 72 aa2.05□□□□□ -2.08
ERCC6-209ENST00000623073 KRTAP4-5Q9BYR2 181 aa2.05□□□□□ -2.08
ERCC6-209ENST00000623073 CSMD3Q7Z407 3707 aa2.04□□□□□ -2.08
ERCC6-209ENST00000623073 DNAH17Q9UFH2 4485 aa2.04□□□□□ -2.08
ERCC6-209ENST00000623073 ANK3Q12955 4377 aaKnown RBP2.04□□□□□ -2.08
ERCC6-209ENST00000623073 VPS13DQ5THJ4 4388 aa2.03□□□□□ -2.08
ERCC6-209ENST00000623073 CMYA5Q8N3K9 4069 aa2.03□□□□□ -2.08
ERCC6-209ENST00000623073 SPRR2BP35325 72 aa2.02□□□□□ -2.09
ERCC6-209ENST00000623073 KRTAP19-3Q7Z4W3 81 aa2.02□□□□□ -2.09
ERCC6-209ENST00000623073 APOBP04114 4563 aaKnown RBP2.02□□□□□ -2.09
ERCC6-209ENST00000623073 LCE3BQ5TA77 95 aa2.02□□□□□ -2.09
ERCC6-209ENST00000623073 DNAH7Q8WXX0 4024 aa2.02□□□□□ -2.09
ERCC6-209ENST00000623073 MT1AP04731 61 aa2.01□□□□□ -2.09
ERCC6-209ENST00000623073 FLGP20930 4061 aaPredicted RBP2.01□□□□□ -2.09
ERCC6-209ENST00000623073 HSPG2P98160 4391 aa2□□□□□ -2.09
ERCC6-209ENST00000623073 FRAS1Q86XX4 4008 aa2□□□□□ -2.09
ERCC6-209ENST00000623073 HECTD4Q9Y4D8 3996 aa2□□□□□ -2.09
ERCC6-209ENST00000623073 DNAH6Q9C0G6 4158 aa1.99□□□□□ -2.09
ERCC6-209ENST00000623073 ANK2Q01484 3957 aa1.99□□□□□ -2.09
ERCC6-209ENST00000623073 LRP1BQ9NZR2 4599 aa1.99□□□□□ -2.09
ERCC6-209ENST00000623073 KRTAP9-8Q9BYQ0 159 aa1.99□□□□□ -2.09
ERCC6-209ENST00000623073 SACSQ9NZJ4 4579 aa1.98□□□□□ -2.09
ERCC6-209ENST00000623073 DNHD1Q96M86 4753 aa1.98□□□□□ -2.09
ERCC6-209ENST00000623073 VPS13BQ7Z7G8 4022 aa1.97□□□□□ -2.09
ERCC6-209ENST00000623073 KRTAP9-3Q9BYQ3 159 aa1.97□□□□□ -2.09
ERCC6-209ENST00000623073 SYNE1Q8NF91 8797 aaKnown RBP1.96□□□□□ -2.1
ERCC6-209ENST00000623073 HERC1Q15751 4861 aa1.96□□□□□ -2.1
ERCC6-209ENST00000623073 DYNC2H1Q8NCM8 4307 aaKnown RBP1.95□□□□□ -2.1
ERCC6-209ENST00000623073 RYR2Q92736 4967 aa1.95□□□□□ -2.1
ERCC6-209ENST00000623073 FAT2Q9NYQ8 4349 aa1.95□□□□□ -2.1
ERCC6-209ENST00000623073 PCLOQ9Y6V0 5065 aa1.94□□□□□ -2.1
ERCC6-209ENST00000623073 PRM1P04553 51 aa1.94□□□□□ -2.1
ERCC6-209ENST00000623073 MT1MQ8N339 61 aa1.94□□□□□ -2.1
ERCC6-209ENST00000623073 LCE2BO14633 110 aa1.92□□□□□ -2.1
ERCC6-209ENST00000623073 HYDINQ4G0P3 5121 aa1.92□□□□□ -2.1
ERCC6-209ENST00000623073 PKD1P98161 4303 aa1.91□□□□□ -2.1
ERCC6-209ENST00000623073 LYSTQ99698 3801 aa1.91□□□□□ -2.1
ERCC6-209ENST00000623073 LCE2CQ5TA81 110 aa1.9□□□□□ -2.1
ERCC6-209ENST00000623073 STARD9Q9P2P6 4700 aa1.9□□□□□ -2.1
ERCC6-209ENST00000623073 DNAH9Q9NYC9 4486 aa1.9□□□□□ -2.11
ERCC6-209ENST00000623073 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
ERCC6-209ENST00000623073 RYR3Q15413 4870 aa1.89□□□□□ -2.11
ERCC6-209ENST00000623073 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
ERCC6-209ENST00000623073 SPRR2EP22531 72 aa1.86□□□□□ -2.11
ERCC6-209ENST00000623073 SPRR2DP22532 72 aa1.86□□□□□ -2.11
ERCC6-209ENST00000623073 PRKDCP78527 4128 aaKnown RBP1.86□□□□□ -2.11
ERCC6-209ENST00000623073 HERC2O95714 4834 aa1.85□□□□□ -2.11
ERCC6-209ENST00000623073 LRP2P98164 4655 aa1.84□□□□□ -2.11
ERCC6-209ENST00000623073 EPPK1P58107 5090 aaKnown RBP1.84□□□□□ -2.12
ERCC6-209ENST00000623073 KRTAP19-7Q3SYF9 63 aa1.83□□□□□ -2.12
ERCC6-209ENST00000623073 KMT2CQ8NEZ4 4911 aaKnown RBP1.83□□□□□ -2.12
ERCC6-209ENST00000623073 KRTAP19-6Q3LI70 58 aa1.82□□□□□ -2.12
ERCC6-209ENST00000623073 KMT2AQ03164 3969 aa1.82□□□□□ -2.12
ERCC6-209ENST00000623073 KIAA1109Q2LD37 5005 aa1.82□□□□□ -2.12
ERCC6-209ENST00000623073 BIRC6Q9NR09 4857 aa1.8□□□□□ -2.12
ERCC6-209ENST00000623073 LCE1AQ5T7P2 110 aa1.8□□□□□ -2.12
ERCC6-209ENST00000623073 KRTAP4-8A0A0G2JLE6 195 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms