RNA–Protein interactions for RNA: ENST00000622250.4

CNTNAP4-209, Transcript of contactin associated protein like 4, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP4, Length 3,783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4-209ENST00000622250 KRTAP10-8P60410 259 aa3.53□□□□□ -1.84
CNTNAP4-209ENST00000622250 KRTAP10-6P60371 365 aaPredicted RBP3.52□□□□□ -1.85
CNTNAP4-209ENST00000622250 A0A1B0GVY2 172 aa3.52□□□□□ -1.85
CNTNAP4-209ENST00000622250 M0QZ58 72 aa3.51□□□□□ -1.85
CNTNAP4-209ENST00000622250 R4GN34 69 aa3.51□□□□□ -1.85
CNTNAP4-209ENST00000622250 HYDINQ4G0P3 5121 aa3.5□□□□□ -1.85
CNTNAP4-209ENST00000622250 TPRXLQ17RH7 258 aa3.5□□□□□ -1.85
CNTNAP4-209ENST00000622250 KRTAP3-3Q9BYR6 98 aa3.49□□□□□ -1.85
CNTNAP4-209ENST00000622250 KRTAP10-4P60372 401 aaPredicted RBP3.48□□□□□ -1.85
CNTNAP4-209ENST00000622250 KRTAP12-2P59991 146 aa3.48□□□□□ -1.85
CNTNAP4-209ENST00000622250 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
CNTNAP4-209ENST00000622250 PKHD1P08F94 4074 aa3.46□□□□□ -1.85
CNTNAP4-209ENST00000622250 KRTAP3-2Q9BYR7 98 aa3.46□□□□□ -1.86
CNTNAP4-209ENST00000622250 MYCBP2O75592 4640 aa3.46□□□□□ -1.86
CNTNAP4-209ENST00000622250 SACSQ9NZJ4 4579 aa3.44□□□□□ -1.86
CNTNAP4-209ENST00000622250 FAT2Q9NYQ8 4349 aa3.44□□□□□ -1.86
CNTNAP4-209ENST00000622250 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
CNTNAP4-209ENST00000622250 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
CNTNAP4-209ENST00000622250 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
CNTNAP4-209ENST00000622250 J3QL48 77 aa3.42□□□□□ -1.86
CNTNAP4-209ENST00000622250 PKD1P98161 4303 aa3.41□□□□□ -1.86
CNTNAP4-209ENST00000622250 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
CNTNAP4-209ENST00000622250 SEC61BP60468 96 aaKnown RBP3.37□□□□□ -1.87
CNTNAP4-209ENST00000622250 APOBP04114 4563 aaKnown RBP3.36□□□□□ -1.87
CNTNAP4-209ENST00000622250 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
CNTNAP4-209ENST00000622250 MT1HL1P0DM35 61 aa3.32□□□□□ -1.88
CNTNAP4-209ENST00000622250 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
CNTNAP4-209ENST00000622250 HSPG2P98160 4391 aa3.27□□□□□ -1.89
CNTNAP4-209ENST00000622250 KIAA1109Q2LD37 5005 aa3.26□□□□□ -1.89
CNTNAP4-209ENST00000622250 LRP2P98164 4655 aa3.24□□□□□ -1.89
CNTNAP4-209ENST00000622250 RYR1P21817 5038 aa3.24□□□□□ -1.89
CNTNAP4-209ENST00000622250 KMT2CQ8NEZ4 4911 aaKnown RBP3.24□□□□□ -1.89
CNTNAP4-209ENST00000622250 LORP23490 312 aaPredicted RBP3.23□□□□□ -1.89
CNTNAP4-209ENST00000622250 PKHD1L1Q86WI1 4243 aa3.22□□□□□ -1.89
CNTNAP4-209ENST00000622250 KRTAP17-1Q9BYP8 105 aa3.22□□□□□ -1.89
CNTNAP4-209ENST00000622250 RYR2Q92736 4967 aa3.21□□□□□ -1.9
CNTNAP4-209ENST00000622250 M0R2T5 61 aa3.21□□□□□ -1.9
CNTNAP4-209ENST00000622250 RYR3Q15413 4870 aa3.21□□□□□ -1.9
CNTNAP4-209ENST00000622250 KRTAP4-5Q9BYR2 181 aa3.2□□□□□ -1.9
CNTNAP4-209ENST00000622250 TNP1P09430 55 aa3.19□□□□□ -1.9
CNTNAP4-209ENST00000622250 PP632Q6XCG6 107 aa3.19□□□□□ -1.9
CNTNAP4-209ENST00000622250 TNXBP22105 4242 aa3.17□□□□□ -1.9
CNTNAP4-209ENST00000622250 LPAP08519 4548 aa3.17□□□□□ -1.9
CNTNAP4-209ENST00000622250 KRTAP4-1Q9BYQ7 146 aa3.12□□□□□ -1.91
CNTNAP4-209ENST00000622250 ABCA13Q86UQ4 5058 aa3.04□□□□□ -1.92
CNTNAP4-209ENST00000622250 KRTAP10-10P60014 251 aa3.01□□□□□ -1.93
CNTNAP4-209ENST00000622250 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
CNTNAP4-209ENST00000622250 PRO2289Q9P1D8 64 aa2.99□□□□□ -1.93
CNTNAP4-209ENST00000622250 MUC2Q02817 5179 aa2.98□□□□□ -1.93
CNTNAP4-209ENST00000622250 HERC2O95714 4834 aa2.96□□□□□ -1.93
CNTNAP4-209ENST00000622250 BIRC6Q9NR09 4857 aa2.91□□□□□ -1.94
CNTNAP4-209ENST00000622250 LCE3AQ5TA76 89 aa2.9□□□□□ -1.94
CNTNAP4-209ENST00000622250 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
CNTNAP4-209ENST00000622250 KRTAP23-1A1A580 65 aa2.89□□□□□ -1.95
CNTNAP4-209ENST00000622250 MUC17Q685J3 4493 aa2.87□□□□□ -1.95
CNTNAP4-209ENST00000622250 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
CNTNAP4-209ENST00000622250 SPRR2GQ9BYE4 73 aa2.83□□□□□ -1.96
CNTNAP4-209ENST00000622250 INE1O15225 51 aa2.83□□□□□ -1.96
CNTNAP4-209ENST00000622250 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
CNTNAP4-209ENST00000622250 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
CNTNAP4-209ENST00000622250 HERC1Q15751 4861 aa2.8□□□□□ -1.96
CNTNAP4-209ENST00000622250 KRTAP12-3P60328 96 aa2.79□□□□□ -1.96
CNTNAP4-209ENST00000622250 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
CNTNAP4-209ENST00000622250 MT1HP80294 61 aa2.79□□□□□ -1.96
CNTNAP4-209ENST00000622250 MT1FP04733 61 aa2.79□□□□□ -1.96
CNTNAP4-209ENST00000622250 MT2AP02795 61 aa2.78□□□□□ -1.96
CNTNAP4-209ENST00000622250 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
CNTNAP4-209ENST00000622250 SPRR5A0A1B0GTR4 108 aa2.77□□□□□ -1.97
CNTNAP4-209ENST00000622250 LCE2CQ5TA81 110 aa2.77□□□□□ -1.97
CNTNAP4-209ENST00000622250 PCLOQ9Y6V0 5065 aa2.76□□□□□ -1.97
CNTNAP4-209ENST00000622250 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
CNTNAP4-209ENST00000622250 HMCN2Q8NDA2 5059 aa2.69□□□□□ -1.98
CNTNAP4-209ENST00000622250 KRTAP9-8Q9BYQ0 159 aa2.68□□□□□ -1.98
CNTNAP4-209ENST00000622250 UBR4Q5T4S7 5183 aa2.68□□□□□ -1.98
CNTNAP4-209ENST00000622250 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
CNTNAP4-209ENST00000622250 KRTAP10-7P60409 375 aaPredicted RBP2.67□□□□□ -1.98
CNTNAP4-209ENST00000622250 MT1XP80297 61 aa2.67□□□□□ -1.98
CNTNAP4-209ENST00000622250 KRTAP19-8Q3LI54 63 aa2.66□□□□□ -1.98
CNTNAP4-209ENST00000622250 MT1BP07438 61 aa2.65□□□□□ -1.98
CNTNAP4-209ENST00000622250 LCE2DQ5TA82 110 aaPredicted RBP2.63□□□□□ -1.99
CNTNAP4-209ENST00000622250 KRTAP19-5Q3LI72 72 aa2.61□□□□□ -1.99
CNTNAP4-209ENST00000622250 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
CNTNAP4-209ENST00000622250 KRTAP9-3Q9BYQ3 159 aa2.56□□□□□ -2
CNTNAP4-209ENST00000622250 KRTAP4-8A0A0G2JLE6 195 aa2.53□□□□□ -2
CNTNAP4-209ENST00000622250 KRTAP4-8Q9BYQ9 185 aa2.53□□□□□ -2
CNTNAP4-209ENST00000622250 USH2AO75445 5202 aa2.51□□□□□ -2.01
CNTNAP4-209ENST00000622250 KMT2DO14686 5537 aa2.51□□□□□ -2.01
CNTNAP4-209ENST00000622250 LCE2BO14633 110 aa2.48□□□□□ -2.01
CNTNAP4-209ENST00000622250 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
CNTNAP4-209ENST00000622250 KRTAP4-7Q9BYR0 210 aa2.47□□□□□ -2.01
CNTNAP4-209ENST00000622250 FSIP2Q5CZC0 6907 aa2.45□□□□□ -2.02
CNTNAP4-209ENST00000622250 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
CNTNAP4-209ENST00000622250 KRTAP19-7Q3SYF9 63 aa2.35□□□□□ -2.03
CNTNAP4-209ENST00000622250 LCE2AQ5TA79 106 aaPredicted RBP2.34□□□□□ -2.04
CNTNAP4-209ENST00000622250 MT1LQ93083 61 aa2.33□□□□□ -2.04
CNTNAP4-209ENST00000622250 MT1EP04732 61 aa2.31□□□□□ -2.04
CNTNAP4-209ENST00000622250 MT1GP13640 62 aa2.31□□□□□ -2.04
CNTNAP4-209ENST00000622250 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
CNTNAP4-209ENST00000622250 LOC100996750A0A140TA64 210 aa2.29□□□□□ -2.04
CNTNAP4-209ENST00000622250 KRTAP2-3P0C7H8 128 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms