RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 LUZP6Q538Z0 58 aa6.6□□□□□ -1.35
SIRPA-204ENST00000622179 ALMS1Q8TCU4 4167 aa6.58□□□□□ -1.36
SIRPA-204ENST00000622179 FRAS1Q86XX4 4008 aa6.56□□□□□ -1.36
SIRPA-204ENST00000622179 MT1HL1P0DM35 61 aa6.55□□□□□ -1.36
SIRPA-204ENST00000622179 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
SIRPA-204ENST00000622179 PLAC4Q8WY50 150 aa6.53□□□□□ -1.36
SIRPA-204ENST00000622179 DYNC2H1Q8NCM8 4307 aaKnown RBP6.52□□□□□ -1.37
SIRPA-204ENST00000622179 DNAH6Q9C0G6 4158 aa6.5□□□□□ -1.37
SIRPA-204ENST00000622179 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
SIRPA-204ENST00000622179 KRTAP13-4Q3LI77 160 aa6.49□□□□□ -1.37
SIRPA-204ENST00000622179 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
SIRPA-204ENST00000622179 HECTD4Q9Y4D8 3996 aa6.47□□□□□ -1.37
SIRPA-204ENST00000622179 VPS13BQ7Z7G8 4022 aa6.47□□□□□ -1.37
SIRPA-204ENST00000622179 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
SIRPA-204ENST00000622179 KRTAP3-3Q9BYR6 98 aa6.43□□□□□ -1.38
SIRPA-204ENST00000622179 NDUFAF8A1L188 74 aa6.4□□□□□ -1.39
SIRPA-204ENST00000622179 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
SIRPA-204ENST00000622179 HYDINQ4G0P3 5121 aa6.36□□□□□ -1.39
SIRPA-204ENST00000622179 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
SIRPA-204ENST00000622179 TNP1P09430 55 aa6.35□□□□□ -1.39
SIRPA-204ENST00000622179 SACSQ9NZJ4 4579 aa6.33□□□□□ -1.4
SIRPA-204ENST00000622179 MYCBP2O75592 4640 aa6.32□□□□□ -1.4
SIRPA-204ENST00000622179 FAT2Q9NYQ8 4349 aa6.32□□□□□ -1.4
SIRPA-204ENST00000622179 RYR1P21817 5038 aa6.28□□□□□ -1.4
SIRPA-204ENST00000622179 KIAA1109Q2LD37 5005 aa6.26□□□□□ -1.41
SIRPA-204ENST00000622179 PKHD1P08F94 4074 aa6.26□□□□□ -1.41
SIRPA-204ENST00000622179 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
SIRPA-204ENST00000622179 LRP1Q07954 4544 aaKnown RBP6.24□□□□□ -1.41
SIRPA-204ENST00000622179 APOBP04114 4563 aaKnown RBP6.24□□□□□ -1.41
SIRPA-204ENST00000622179 PP632Q6XCG6 107 aa6.2□□□□□ -1.42
SIRPA-204ENST00000622179 RYR3Q15413 4870 aa6.18□□□□□ -1.42
SIRPA-204ENST00000622179 A0A0A0MQY5 61 aa6.17□□□□□ -1.42
SIRPA-204ENST00000622179 FAT3Q8TDW7 4589 aa6.14□□□□□ -1.43
SIRPA-204ENST00000622179 RYR2Q92736 4967 aa6.09□□□□□ -1.43
SIRPA-204ENST00000622179 KRTAP17-1Q9BYP8 105 aa6.09□□□□□ -1.43
SIRPA-204ENST00000622179 PKD1P98161 4303 aa6.06□□□□□ -1.44
SIRPA-204ENST00000622179 LORP23490 312 aaPredicted RBP6.05□□□□□ -1.44
SIRPA-204ENST00000622179 KMT2CQ8NEZ4 4911 aaKnown RBP6.04□□□□□ -1.44
SIRPA-204ENST00000622179 KRTAP4-1Q9BYQ7 146 aa5.99□□□□□ -1.45
SIRPA-204ENST00000622179 LRP2P98164 4655 aa5.92□□□□□ -1.46
SIRPA-204ENST00000622179 HSPG2P98160 4391 aa5.91□□□□□ -1.46
SIRPA-204ENST00000622179 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
SIRPA-204ENST00000622179 KRTAP15-1Q3LI76 137 aa5.81□□□□□ -1.48
SIRPA-204ENST00000622179 HERC2O95714 4834 aa5.8□□□□□ -1.48
SIRPA-204ENST00000622179 LPAP08519 4548 aa5.74□□□□□ -1.49
SIRPA-204ENST00000622179 PKHD1L1Q86WI1 4243 aa5.71□□□□□ -1.49
SIRPA-204ENST00000622179 TNXBP22105 4242 aa5.69□□□□□ -1.5
SIRPA-204ENST00000622179 EPPK1P58107 5090 aaKnown RBP5.68□□□□□ -1.5
SIRPA-204ENST00000622179 MT1HP80294 61 aa5.57□□□□□ -1.52
SIRPA-204ENST00000622179 LCE3AQ5TA76 89 aa5.55□□□□□ -1.52
SIRPA-204ENST00000622179 ABCA13Q86UQ4 5058 aa5.54□□□□□ -1.52
SIRPA-204ENST00000622179 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
SIRPA-204ENST00000622179 MT2AP02795 61 aa5.5□□□□□ -1.53
SIRPA-204ENST00000622179 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
SIRPA-204ENST00000622179 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
SIRPA-204ENST00000622179 MT1FP04733 61 aa5.46□□□□□ -1.54
SIRPA-204ENST00000622179 KRTAP23-1A1A580 65 aa5.45□□□□□ -1.54
SIRPA-204ENST00000622179 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
SIRPA-204ENST00000622179 HERC1Q15751 4861 aa5.39□□□□□ -1.55
SIRPA-204ENST00000622179 KRTAP19-1Q8IUB9 90 aa5.35□□□□□ -1.55
SIRPA-204ENST00000622179 PCLOQ9Y6V0 5065 aa5.35□□□□□ -1.55
SIRPA-204ENST00000622179 MUC2Q02817 5179 aa5.33□□□□□ -1.56
SIRPA-204ENST00000622179 KRTAP19-2Q3LHN2 52 aa5.31□□□□□ -1.56
SIRPA-204ENST00000622179 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
SIRPA-204ENST00000622179 MUC17Q685J3 4493 aa5.27□□□□□ -1.57
SIRPA-204ENST00000622179 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
SIRPA-204ENST00000622179 KRTAP9-8Q9BYQ0 159 aa5.19□□□□□ -1.58
SIRPA-204ENST00000622179 RNF213Q63HN8 5207 aa5.18□□□□□ -1.58
SIRPA-204ENST00000622179 FAT4Q6V0I7 4981 aa5.16□□□□□ -1.58
SIRPA-204ENST00000622179 KRTAP19-8Q3LI54 63 aa5.14□□□□□ -1.59
SIRPA-204ENST00000622179 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
SIRPA-204ENST00000622179 MT1BP07438 61 aa5.1□□□□□ -1.59
SIRPA-204ENST00000622179 KRTAP10-7P60409 375 aaPredicted RBP5.1□□□□□ -1.59
SIRPA-204ENST00000622179 CRCT1Q9UGL9 99 aa5.1□□□□□ -1.59
SIRPA-204ENST00000622179 UBR4Q5T4S7 5183 aa5.09□□□□□ -1.59
SIRPA-204ENST00000622179 MT1XP80297 61 aa5.09□□□□□ -1.59
SIRPA-204ENST00000622179 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
SIRPA-204ENST00000622179 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
SIRPA-204ENST00000622179 KRTAP19-5Q3LI72 72 aa5.05□□□□□ -1.6
SIRPA-204ENST00000622179 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SIRPA-204ENST00000622179 INE1O15225 51 aa4.99□□□□□ -1.61
SIRPA-204ENST00000622179 LCE3CQ5T5A8 94 aa4.9□□□□□ -1.63
SIRPA-204ENST00000622179 FSIP2Q5CZC0 6907 aa4.89□□□□□ -1.63
SIRPA-204ENST00000622179 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
SIRPA-204ENST00000622179 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
SIRPA-204ENST00000622179 LCE2BO14633 110 aa4.85□□□□□ -1.63
SIRPA-204ENST00000622179 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
SIRPA-204ENST00000622179 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
SIRPA-204ENST00000622179 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SIRPA-204ENST00000622179 LCE2AQ5TA79 106 aaPredicted RBP4.6□□□□□ -1.67
SIRPA-204ENST00000622179 USH2AO75445 5202 aa4.57□□□□□ -1.68
SIRPA-204ENST00000622179 KRTAP19-4Q3LI73 84 aa4.53□□□□□ -1.68
SIRPA-204ENST00000622179 MT1GP13640 62 aa4.53□□□□□ -1.68
SIRPA-204ENST00000622179 MT1LQ93083 61 aa4.49□□□□□ -1.69
SIRPA-204ENST00000622179 MT1EP04732 61 aa4.48□□□□□ -1.69
SIRPA-204ENST00000622179 KMT2DO14686 5537 aa4.47□□□□□ -1.69
SIRPA-204ENST00000622179 KRTAP19-7Q3SYF9 63 aa4.42□□□□□ -1.7
SIRPA-204ENST00000622179 KRTAP19-6Q3LI70 58 aa4.38□□□□□ -1.71
SIRPA-204ENST00000622179 KRTAP19-3Q7Z4W3 81 aa4.36□□□□□ -1.71
SIRPA-204ENST00000622179 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms