RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 DNAH11Q96DT5 4516 aa0.84□□□□□ -2.28
BRCA1-229ENST00000621897 WDFY4Q6ZS81 3184 aa0.84□□□□□ -2.28
BRCA1-229ENST00000621897 GCN1Q92616 2671 aaKnown RBP0.84□□□□□ -2.28
BRCA1-229ENST00000621897 SMG1Q96Q15 3661 aaKnown RBP0.84□□□□□ -2.28
BRCA1-229ENST00000621897 TNXBP22105 4242 aa0.84□□□□□ -2.28
BRCA1-229ENST00000621897 UNC79Q9P2D8 2635 aa0.84□□□□□ -2.28
BRCA1-229ENST00000621897 HUWE1Q7Z6Z7 4374 aaKnown RBP0.83□□□□□ -2.28
BRCA1-229ENST00000621897 DMDP11532 3685 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 CELSR3Q9NYQ7 3312 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 MYO15AQ9UKN7 3530 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 UBR5O95071 2799 aaPredicted RBP0.83□□□□□ -2.28
BRCA1-229ENST00000621897 DNAH3Q8TD57 4116 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 VPS13DQ5THJ4 4388 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 NBPF19A0A087WUL8 3843 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 CSMD1Q96PZ7 3565 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 USP9YO00507 2555 aaPredicted RBP0.83□□□□□ -2.28
BRCA1-229ENST00000621897 ATMQ13315 3056 aa0.83□□□□□ -2.28
BRCA1-229ENST00000621897 TEX15Q9BXT5 2789 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 CELSR1Q9NYQ6 3014 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 ZFHX4Q86UP3 3567 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 M0R2T5 61 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 CFAP46Q8IYW2 2715 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 AHNAKQ09666 5890 aaKnown RBP0.82□□□□□ -2.28
BRCA1-229ENST00000621897 DNAH7Q8WXX0 4024 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 SACSQ9NZJ4 4579 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 TACC2O95359 2948 aa0.82□□□□□ -2.28
BRCA1-229ENST00000621897 SETXQ7Z333 2677 aaKnown RBP0.82□□□□□ -2.28
BRCA1-229ENST00000621897 DCHS1Q96JQ0 3298 aa0.81□□□□□ -2.28
BRCA1-229ENST00000621897 UTP20O75691 2785 aaKnown RBP0.81□□□□□ -2.28
BRCA1-229ENST00000621897 APCP25054 2843 aa0.81□□□□□ -2.28
BRCA1-229ENST00000621897 BOD1L1Q8NFC6 3051 aa0.81□□□□□ -2.28
BRCA1-229ENST00000621897 FASNP49327 2511 aaKnown RBP0.81□□□□□ -2.28
BRCA1-229ENST00000621897 VPS13CQ709C8 3753 aa0.81□□□□□ -2.28
BRCA1-229ENST00000621897 CRYBG3Q68DQ2 2970 aa0.81□□□□□ -2.28
BRCA1-229ENST00000621897 KMT2AQ03164 3969 aa0.81□□□□□ -2.28
BRCA1-229ENST00000621897 DYNC2H1Q8NCM8 4307 aaKnown RBP0.8□□□□□ -2.28
BRCA1-229ENST00000621897 CENPEQ02224 2701 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 HECTD4Q9Y4D8 3996 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 H3BNG1 76 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 KRTAP2-3P0C7H8 128 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 KRTAP2-4Q9BYR9 128 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 KRTAP2-1Q9BYU5 128 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 TENM2Q9NT68 2774 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 ACACBO00763 2458 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 DNAH2Q9P225 4427 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 MYO18BQ8IUG5 2567 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 STAB2Q8WWQ8 2551 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 COL6A5A8TX70 2615 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 ANKRD11Q6UB99 2663 aaPredicted RBP0.8□□□□□ -2.28
BRCA1-229ENST00000621897 DNAH1Q9P2D7 4330 aa0.8□□□□□ -2.28
BRCA1-229ENST00000621897 LOC400499M0QZD8 3231 aa0.79□□□□□ -2.28
BRCA1-229ENST00000621897 USP24Q9UPU5 2620 aa0.79□□□□□ -2.28
BRCA1-229ENST00000621897 LAMA5O15230 3695 aa0.79□□□□□ -2.28
BRCA1-229ENST00000621897 HIVEP1P15822 2718 aa0.79□□□□□ -2.28
BRCA1-229ENST00000621897 NF1P21359 2839 aa0.79□□□□□ -2.28
BRCA1-229ENST00000621897 DNAH6Q9C0G6 4158 aa0.79□□□□□ -2.28
BRCA1-229ENST00000621897 TEP1Q99973 2627 aaKnown RBP0.79□□□□□ -2.28
BRCA1-229ENST00000621897 NBEAL1Q6ZS30 2694 aa0.79□□□□□ -2.28
BRCA1-229ENST00000621897 ADGRG4Q8IZF6 3080 aa0.78□□□□□ -2.28
BRCA1-229ENST00000621897 DNAH10Q8IVF4 4471 aa0.78□□□□□ -2.28
BRCA1-229ENST00000621897 PKHD1L1Q86WI1 4243 aa0.78□□□□□ -2.28
BRCA1-229ENST00000621897 M0QZ58 72 aa0.78□□□□□ -2.28
BRCA1-229ENST00000621897 TRRAPQ9Y4A5 3859 aa0.78□□□□□ -2.28
BRCA1-229ENST00000621897 CEP295Q9C0D2 2601 aa0.78□□□□□ -2.29
BRCA1-229ENST00000621897 MUC5BQ9HC84 5762 aaPredicted RBP0.78□□□□□ -2.29
BRCA1-229ENST00000621897 TGP01266 2768 aa0.78□□□□□ -2.29
BRCA1-229ENST00000621897 NBEAL2Q6ZNJ1 2754 aa0.78□□□□□ -2.29
BRCA1-229ENST00000621897 DNAH17Q9UFH2 4485 aa0.77□□□□□ -2.29
BRCA1-229ENST00000621897 ASPMQ8IZT6 3477 aa0.77□□□□□ -2.29
BRCA1-229ENST00000621897 COL12A1Q99715 3063 aa0.77□□□□□ -2.29
BRCA1-229ENST00000621897 DNAH8Q96JB1 4490 aa0.77□□□□□ -2.29
BRCA1-229ENST00000621897 AHNAK2Q8IVF2 5795 aa0.76□□□□□ -2.29
BRCA1-229ENST00000621897 ZANQ9Y493 2812 aa0.76□□□□□ -2.29
BRCA1-229ENST00000621897 PKD1L1Q8TDX9 2849 aa0.75□□□□□ -2.29
BRCA1-229ENST00000621897 CUBNO60494 3623 aa0.75□□□□□ -2.29
BRCA1-229ENST00000621897 MGAM2Q2M2H8 2515 aa0.75□□□□□ -2.29
BRCA1-229ENST00000621897 C9orf92A6NGG3 77 aa0.75□□□□□ -2.29
BRCA1-229ENST00000621897 NIPBLQ6KC79 2804 aaeCLIP0.75□□□□□ -2.29
BRCA1-229ENST00000621897 DNAH9Q9NYC9 4486 aa0.75□□□□□ -2.29
BRCA1-229ENST00000621897 RELNP78509 3460 aa0.74□□□□□ -2.29
BRCA1-229ENST00000621897 PDZD2O15018 2839 aa0.74□□□□□ -2.29
BRCA1-229ENST00000621897 APOBP04114 4563 aaKnown RBP0.74□□□□□ -2.29
BRCA1-229ENST00000621897 ITPR2Q14571 2701 aa0.74□□□□□ -2.29
BRCA1-229ENST00000621897 MYCBP2O75592 4640 aa0.74□□□□□ -2.29
BRCA1-229ENST00000621897 STAB1Q9NY15 2570 aa0.74□□□□□ -2.29
BRCA1-229ENST00000621897 FLNCQ14315 2725 aa0.73□□□□□ -2.29
BRCA1-229ENST00000621897 ITPR3Q14573 2671 aa0.73□□□□□ -2.29
BRCA1-229ENST00000621897 PKD1P98161 4303 aa0.73□□□□□ -2.29
BRCA1-229ENST00000621897 MXRA5Q9NR99 2828 aa0.73□□□□□ -2.29
BRCA1-229ENST00000621897 PLECQ15149 4684 aaKnown RBP0.73□□□□□ -2.29
BRCA1-229ENST00000621897 MAST4O15021 2626 aa0.72□□□□□ -2.29
BRCA1-229ENST00000621897 CSMD2Q7Z408 3487 aa0.72□□□□□ -2.29
BRCA1-229ENST00000621897 PRM1P04553 51 aa0.72□□□□□ -2.29
BRCA1-229ENST00000621897 TNP1P09430 55 aa0.72□□□□□ -2.29
BRCA1-229ENST00000621897 NSD1Q96L73 2696 aaPredicted RBP0.72□□□□□ -2.29
BRCA1-229ENST00000621897 PKHD1P08F94 4074 aa0.72□□□□□ -2.29
BRCA1-229ENST00000621897 FLNAP21333 2647 aaKnown RBP0.72□□□□□ -2.29
BRCA1-229ENST00000621897 IGSF10Q6WRI0 2623 aa0.72□□□□□ -2.29
BRCA1-229ENST00000621897 STARD9Q9P2P6 4700 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms