RNA–Protein interactions for RNA: ENST00000621747.5

VEGFA-229, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-229ENST00000621747 KRTAP19-8Q3LI54 63 aa11.29□□□□□ -0.6
VEGFA-229ENST00000621747 A0A087WVE0 104 aa11.27□□□□□ -0.61
VEGFA-229ENST00000621747 A6NN06 94 aa11.25□□□□□ -0.61
VEGFA-229ENST00000621747 KRTAP6-3Q3LI67 103 aa11.24□□□□□ -0.61
VEGFA-229ENST00000621747 LINC00643Q86TS7 51 aa11.24□□□□□ -0.61
VEGFA-229ENST00000621747 CRIPTQ9P021 101 aa11.2□□□□□ -0.62
VEGFA-229ENST00000621747 IMUPQ9GZP8 106 aa11.19□□□□□ -0.62
VEGFA-229ENST00000621747 NDUFC1O43677 76 aa11.18□□□□□ -0.62
VEGFA-229ENST00000621747 A8MUN3 132 aa11.14□□□□□ -0.63
VEGFA-229ENST00000621747 LINC00208Q96KT6 92 aa11.11□□□□□ -0.63
VEGFA-229ENST00000621747 H0YAA0 97 aa11.09□□□□□ -0.63
VEGFA-229ENST00000621747 KRTAP10-5P60370 271 aa11.08□□□□□ -0.64
VEGFA-229ENST00000621747 MP68P56378 58 aa11.07□□□□□ -0.64
VEGFA-229ENST00000621747 OCR1Q9BZK8 76 aa11.04□□□□□ -0.64
VEGFA-229ENST00000621747 A0A1B0GV90 55 aa11.03□□□□□ -0.64
VEGFA-229ENST00000621747 ADM2Q7Z4H4 148 aa10.96□□□□□ -0.65
VEGFA-229ENST00000621747 J3QR89 54 aa10.92□□□□□ -0.66
VEGFA-229ENST00000621747 H3BPC8 53 aa10.9□□□□□ -0.66
VEGFA-229ENST00000621747 SCGB1A1P11684 91 aa10.83□□□□□ -0.68
VEGFA-229ENST00000621747 DMAC1Q96GE9 116 aa10.77□□□□□ -0.69
VEGFA-229ENST00000621747 C20orf197Q8N268 126 aa10.73□□□□□ -0.69
VEGFA-229ENST00000621747 MUC12Q9UKN1 5478 aa10.72□□□□□ -0.69
VEGFA-229ENST00000621747 R4GN34 69 aa10.71□□□□□ -0.69
VEGFA-229ENST00000621747 PRO2289Q9P1D8 64 aa10.7□□□□□ -0.7
VEGFA-229ENST00000621747 KRTAP5-9P26371 169 aa10.69□□□□□ -0.7
VEGFA-229ENST00000621747 PLAC4Q8WY50 150 aa10.68□□□□□ -0.7
VEGFA-229ENST00000621747 NEBP20929 6669 aa10.67□□□□□ -0.7
VEGFA-229ENST00000621747 P0C880 135 aa10.67□□□□□ -0.7
VEGFA-229ENST00000621747 M0QZ58 72 aa10.6□□□□□ -0.71
VEGFA-229ENST00000621747 MT1XP80297 61 aa10.59□□□□□ -0.71
VEGFA-229ENST00000621747 TRAV7A0A075B6U4 112 aa10.56□□□□□ -0.72
VEGFA-229ENST00000621747 KRTAP3-2Q9BYR7 98 aa10.55□□□□□ -0.72
VEGFA-229ENST00000621747 ACYP2P14621 99 aa10.52□□□□□ -0.73
VEGFA-229ENST00000621747 SMIM20Q8N5G0 67 aa10.52□□□□□ -0.73
VEGFA-229ENST00000621747 MT-ATP8P03928 68 aa10.5□□□□□ -0.73
VEGFA-229ENST00000621747 KMT2DO14686 5537 aa10.49□□□□□ -0.73
VEGFA-229ENST00000621747 K7ERU9 68 aa10.45□□□□□ -0.74
VEGFA-229ENST00000621747 KRTAP20-1Q3LI63 56 aa10.45□□□□□ -0.74
VEGFA-229ENST00000621747 LINC01554Q52M75 96 aa10.45□□□□□ -0.74
VEGFA-229ENST00000621747 SPTSSBQ8NFR3 76 aa10.44□□□□□ -0.74
VEGFA-229ENST00000621747 MDN1Q9NU22 5596 aa10.44□□□□□ -0.74
VEGFA-229ENST00000621747 KRTAP12-2P59991 146 aa10.38□□□□□ -0.75
VEGFA-229ENST00000621747 SPRR2FQ96RM1 72 aa10.38□□□□□ -0.75
VEGFA-229ENST00000621747 CHKB-CPT1BH3BT56 60 aa10.34□□□□□ -0.75
VEGFA-229ENST00000621747 KRTAP8-1Q8IUC2 63 aa10.33□□□□□ -0.76
VEGFA-229ENST00000621747 SNURFQ9Y675 71 aa10.27□□□□□ -0.77
VEGFA-229ENST00000621747 SPRR2EP22531 72 aa10.24□□□□□ -0.77
VEGFA-229ENST00000621747 SPRR2BP35325 72 aa10.24□□□□□ -0.77
VEGFA-229ENST00000621747 SPRR2AP35326 72 aa10.24□□□□□ -0.77
VEGFA-229ENST00000621747 SPANXA2-OT1Q8N9U9 137 aa10.17□□□□□ -0.78
VEGFA-229ENST00000621747 KRTAP2-3P0C7H8 128 aa10.16□□□□□ -0.78
VEGFA-229ENST00000621747 KRTAP2-4Q9BYR9 128 aa10.16□□□□□ -0.78
VEGFA-229ENST00000621747 KRTAP4-8A0A0G2JLE6 195 aa10.12□□□□□ -0.79
VEGFA-229ENST00000621747 KRTAP4-8Q9BYQ9 185 aa10.12□□□□□ -0.79
VEGFA-229ENST00000621747 KRTAP10-7P60409 375 aaPredicted RBP10.1□□□□□ -0.79
VEGFA-229ENST00000621747 SERP2Q8N6R1 65 aa10.09□□□□□ -0.79
VEGFA-229ENST00000621747 LCE1AQ5T7P2 110 aa10.08□□□□□ -0.8
VEGFA-229ENST00000621747 KRTAP10-12P60413 245 aa10.06□□□□□ -0.8
VEGFA-229ENST00000621747 KRTAP13-4Q3LI77 160 aa9.93□□□□□ -0.82
VEGFA-229ENST00000621747 SPRR2DP22532 72 aa9.9□□□□□ -0.82
VEGFA-229ENST00000621747 COA5Q86WW8 74 aa9.89□□□□□ -0.83
VEGFA-229ENST00000621747 CAMK2N1Q7Z7J9 78 aa9.84□□□□□ -0.83
VEGFA-229ENST00000621747 KRTAP2-2Q9BYT5 123 aa9.84□□□□□ -0.83
VEGFA-229ENST00000621747 KRTAP2-1Q9BYU5 128 aa9.84□□□□□ -0.83
VEGFA-229ENST00000621747 SEC61GP60059 68 aa9.8□□□□□ -0.84
VEGFA-229ENST00000621747 SERP1Q9Y6X1 66 aa9.77□□□□□ -0.85
VEGFA-229ENST00000621747 COX7CP15954 63 aa9.76□□□□□ -0.85
VEGFA-229ENST00000621747 A0A0D9SG42 100 aa9.66□□□□□ -0.86
VEGFA-229ENST00000621747 LCE3BQ5TA77 95 aa9.64□□□□□ -0.87
VEGFA-229ENST00000621747 H7BZZ5 65 aa9.62□□□□□ -0.87
VEGFA-229ENST00000621747 A0A1B0GU33 70 aa9.6□□□□□ -0.87
VEGFA-229ENST00000621747 SPATA8Q6RVD6 105 aa9.6□□□□□ -0.87
VEGFA-229ENST00000621747 CYSTM1Q9H1C7 97 aa9.57□□□□□ -0.88
VEGFA-229ENST00000621747 SPINT4Q6UDR6 99 aa9.54□□□□□ -0.88
VEGFA-229ENST00000621747 KRTAP19-7Q3SYF9 63 aa9.46□□□□□ -0.9
VEGFA-229ENST00000621747 KRTAP12-1P59990 96 aa9.44□□□□□ -0.9
VEGFA-229ENST00000621747 A0A1B0GU69 56 aa9.41□□□□□ -0.9
VEGFA-229ENST00000621747 MT1EP04732 61 aa9.4□□□□□ -0.9
VEGFA-229ENST00000621747 SMIM26A0A096LP01 95 aa9.36□□□□□ -0.91
VEGFA-229ENST00000621747 LCE5AQ5TCM9 118 aa9.36□□□□□ -0.91
VEGFA-229ENST00000621747 ANAPC13Q9BS18 74 aa9.36□□□□□ -0.91
VEGFA-229ENST00000621747 KRTAP19-3Q7Z4W3 81 aa9.34□□□□□ -0.91
VEGFA-229ENST00000621747 A8MU10 97 aa9.22□□□□□ -0.93
VEGFA-229ENST00000621747 KRTAP19-5Q3LI72 72 aa9.22□□□□□ -0.93
VEGFA-229ENST00000621747 CCDC179H3BU77 68 aa9.15□□□□□ -0.94
VEGFA-229ENST00000621747 ATP5EP56381 51 aaPredicted RBP9.15□□□□□ -0.94
VEGFA-229ENST00000621747 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
VEGFA-229ENST00000621747 DSTQ03001 7570 aaKnown RBP9.13□□□□□ -0.95
VEGFA-229ENST00000621747 MT1GP13640 62 aa9.12□□□□□ -0.95
VEGFA-229ENST00000621747 PP632Q6XCG6 107 aa9.08□□□□□ -0.96
VEGFA-229ENST00000621747 TNP1P09430 55 aa9.06□□□□□ -0.96
VEGFA-229ENST00000621747 C10orf95Q9H7T3 257 aa9.02□□□□□ -0.97
VEGFA-229ENST00000621747 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
VEGFA-229ENST00000621747 LINC01558Q9Y6Z2 57 aa8.98□□□□□ -0.97
VEGFA-229ENST00000621747 MT1LQ93083 61 aa8.97□□□□□ -0.97
VEGFA-229ENST00000621747 MT1MQ8N339 61 aa8.95□□□□□ -0.98
VEGFA-229ENST00000621747 KRTAP4-9Q9BYQ8 210 aa8.95□□□□□ -0.98
VEGFA-229ENST00000621747 TMEM258P61165 79 aa8.84□□□□□ -0.99
VEGFA-229ENST00000621747 SVIPQ8NHG7 77 aa8.84□□□□□ -0.99
VEGFA-229ENST00000621747 UQCR11O14957 56 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms