RNA–Protein interactions for RNA: ENST00000621734.4

GTF2I-221, Transcript of general transcription factor IIi, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF2I, Length 4,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2I-221ENST00000621734 DNAH10Q8IVF4 4471 aa6.59□□□□□ -1.35
GTF2I-221ENST00000621734 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
GTF2I-221ENST00000621734 LRP1BQ9NZR2 4599 aa6.58□□□□□ -1.36
GTF2I-221ENST00000621734 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
GTF2I-221ENST00000621734 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
GTF2I-221ENST00000621734 ANK2Q01484 3957 aa6.54□□□□□ -1.36
GTF2I-221ENST00000621734 KRTAP10-6P60371 365 aaPredicted RBP6.51□□□□□ -1.37
GTF2I-221ENST00000621734 KRTAP12-1P59990 96 aa6.5□□□□□ -1.37
GTF2I-221ENST00000621734 RYR3Q15413 4870 aa6.49□□□□□ -1.37
GTF2I-221ENST00000621734 A0A0A0MQY5 61 aa6.49□□□□□ -1.37
GTF2I-221ENST00000621734 LYSTQ99698 3801 aa6.49□□□□□ -1.37
GTF2I-221ENST00000621734 KRTAP13-4Q3LI77 160 aa6.46□□□□□ -1.37
GTF2I-221ENST00000621734 KMT2AQ03164 3969 aa6.45□□□□□ -1.38
GTF2I-221ENST00000621734 KRTAP3-3Q9BYR6 98 aa6.44□□□□□ -1.38
GTF2I-221ENST00000621734 DNAH17Q9UFH2 4485 aa6.43□□□□□ -1.38
GTF2I-221ENST00000621734 DNAH2Q9P225 4427 aa6.38□□□□□ -1.39
GTF2I-221ENST00000621734 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
GTF2I-221ENST00000621734 MYCBP2O75592 4640 aa6.35□□□□□ -1.39
GTF2I-221ENST00000621734 DNAH8Q96JB1 4490 aa6.34□□□□□ -1.39
GTF2I-221ENST00000621734 KRTAP3-2Q9BYR7 98 aa6.34□□□□□ -1.39
GTF2I-221ENST00000621734 HYDINQ4G0P3 5121 aa6.32□□□□□ -1.4
GTF2I-221ENST00000621734 FAT2Q9NYQ8 4349 aa6.29□□□□□ -1.4
GTF2I-221ENST00000621734 KRTAP4-1Q9BYQ7 146 aa6.29□□□□□ -1.4
GTF2I-221ENST00000621734 VPS13BQ7Z7G8 4022 aa6.29□□□□□ -1.4
GTF2I-221ENST00000621734 KRTAP17-1Q9BYP8 105 aa6.27□□□□□ -1.41
GTF2I-221ENST00000621734 FAT3Q8TDW7 4589 aa6.26□□□□□ -1.41
GTF2I-221ENST00000621734 APOBP04114 4563 aaKnown RBP6.25□□□□□ -1.41
GTF2I-221ENST00000621734 DYNC2H1Q8NCM8 4307 aaKnown RBP6.24□□□□□ -1.41
GTF2I-221ENST00000621734 HERC2O95714 4834 aa6.23□□□□□ -1.41
GTF2I-221ENST00000621734 LRP1Q07954 4544 aaKnown RBP6.22□□□□□ -1.41
GTF2I-221ENST00000621734 DNAH3Q8TD57 4116 aa6.17□□□□□ -1.42
GTF2I-221ENST00000621734 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
GTF2I-221ENST00000621734 RYR2Q92736 4967 aa6.17□□□□□ -1.42
GTF2I-221ENST00000621734 KMT2CQ8NEZ4 4911 aaKnown RBP6.12□□□□□ -1.43
GTF2I-221ENST00000621734 FRAS1Q86XX4 4008 aa6.09□□□□□ -1.43
GTF2I-221ENST00000621734 CMYA5Q8N3K9 4069 aa6.09□□□□□ -1.43
GTF2I-221ENST00000621734 KRTAP15-1Q3LI76 137 aa6.08□□□□□ -1.44
GTF2I-221ENST00000621734 MT1HP80294 61 aa6.07□□□□□ -1.44
GTF2I-221ENST00000621734 DNAH6Q9C0G6 4158 aa6.06□□□□□ -1.44
GTF2I-221ENST00000621734 BIRC6Q9NR09 4857 aa6.04□□□□□ -1.44
GTF2I-221ENST00000621734 PKHD1P08F94 4074 aa6.01□□□□□ -1.45
GTF2I-221ENST00000621734 KRTAP10-12P60413 245 aa6□□□□□ -1.45
GTF2I-221ENST00000621734 DNAH7Q8WXX0 4024 aa6□□□□□ -1.45
GTF2I-221ENST00000621734 LRP2P98164 4655 aa5.99□□□□□ -1.45
GTF2I-221ENST00000621734 MT2AP02795 61 aa5.94□□□□□ -1.46
GTF2I-221ENST00000621734 PCLOQ9Y6V0 5065 aa5.88□□□□□ -1.47
GTF2I-221ENST00000621734 HECTD4Q9Y4D8 3996 aa5.87□□□□□ -1.47
GTF2I-221ENST00000621734 MT1FP04733 61 aa5.85□□□□□ -1.47
GTF2I-221ENST00000621734 HSPG2P98160 4391 aa5.85□□□□□ -1.47
GTF2I-221ENST00000621734 EPPK1P58107 5090 aaKnown RBP5.81□□□□□ -1.48
GTF2I-221ENST00000621734 KRTAP12-3P60328 96 aa5.81□□□□□ -1.48
GTF2I-221ENST00000621734 LCE3AQ5TA76 89 aa5.78□□□□□ -1.48
GTF2I-221ENST00000621734 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
GTF2I-221ENST00000621734 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
GTF2I-221ENST00000621734 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
GTF2I-221ENST00000621734 ABCA13Q86UQ4 5058 aa5.7□□□□□ -1.5
GTF2I-221ENST00000621734 HERC1Q15751 4861 aa5.7□□□□□ -1.5
GTF2I-221ENST00000621734 PKD1P98161 4303 aa5.66□□□□□ -1.5
GTF2I-221ENST00000621734 LPAP08519 4548 aa5.6□□□□□ -1.51
GTF2I-221ENST00000621734 KRTAP23-1A1A580 65 aa5.6□□□□□ -1.51
GTF2I-221ENST00000621734 FSIP2Q5CZC0 6907 aa5.59□□□□□ -1.51
GTF2I-221ENST00000621734 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
GTF2I-221ENST00000621734 LCE2CQ5TA81 110 aa5.56□□□□□ -1.52
GTF2I-221ENST00000621734 UBR4Q5T4S7 5183 aa5.54□□□□□ -1.52
GTF2I-221ENST00000621734 KRTAP9-8Q9BYQ0 159 aa5.51□□□□□ -1.53
GTF2I-221ENST00000621734 SPRR2FQ96RM1 72 aa5.44□□□□□ -1.54
GTF2I-221ENST00000621734 KRTAP19-8Q3LI54 63 aa5.44□□□□□ -1.54
GTF2I-221ENST00000621734 RNF213Q63HN8 5207 aa5.4□□□□□ -1.54
GTF2I-221ENST00000621734 KRTAP19-2Q3LHN2 52 aa5.37□□□□□ -1.55
GTF2I-221ENST00000621734 MT1BP07438 61 aa5.35□□□□□ -1.55
GTF2I-221ENST00000621734 KRTAP9-3Q9BYQ3 159 aa5.34□□□□□ -1.55
GTF2I-221ENST00000621734 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
GTF2I-221ENST00000621734 PKHD1L1Q86WI1 4243 aa5.33□□□□□ -1.56
GTF2I-221ENST00000621734 KRTAP10-7P60409 375 aaPredicted RBP5.31□□□□□ -1.56
GTF2I-221ENST00000621734 TNXBP22105 4242 aa5.3□□□□□ -1.56
GTF2I-221ENST00000621734 FAT4Q6V0I7 4981 aa5.29□□□□□ -1.56
GTF2I-221ENST00000621734 KRTAP10-5P60370 271 aa5.28□□□□□ -1.56
GTF2I-221ENST00000621734 MT1XP80297 61 aa5.28□□□□□ -1.56
GTF2I-221ENST00000621734 MUC17Q685J3 4493 aa5.26□□□□□ -1.57
GTF2I-221ENST00000621734 MUC2Q02817 5179 aa5.23□□□□□ -1.57
GTF2I-221ENST00000621734 LCE2BO14633 110 aa5.2□□□□□ -1.58
GTF2I-221ENST00000621734 HMCN2Q8NDA2 5059 aa5.17□□□□□ -1.58
GTF2I-221ENST00000621734 KRTAP4-8A0A0G2JLE6 195 aa5.17□□□□□ -1.58
GTF2I-221ENST00000621734 KRTAP4-8Q9BYQ9 185 aa5.17□□□□□ -1.58
GTF2I-221ENST00000621734 FLGP20930 4061 aaPredicted RBP5.14□□□□□ -1.59
GTF2I-221ENST00000621734 SYNE1Q8NF91 8797 aaKnown RBP5.09□□□□□ -1.59
GTF2I-221ENST00000621734 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.6
GTF2I-221ENST00000621734 LCE2AQ5TA79 106 aaPredicted RBP5.08□□□□□ -1.6
GTF2I-221ENST00000621734 SPRR2EP22531 72 aa5.07□□□□□ -1.6
GTF2I-221ENST00000621734 SPRR2BP35325 72 aa5.07□□□□□ -1.6
GTF2I-221ENST00000621734 SPRR2AP35326 72 aa5.07□□□□□ -1.6
GTF2I-221ENST00000621734 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.61
GTF2I-221ENST00000621734 INE1O15225 51 aa5.01□□□□□ -1.61
GTF2I-221ENST00000621734 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
GTF2I-221ENST00000621734 SPRR2DP22532 72 aa4.88□□□□□ -1.63
GTF2I-221ENST00000621734 MT1GP13640 62 aa4.88□□□□□ -1.63
GTF2I-221ENST00000621734 SPRR5A0A1B0GTR4 108 aa4.88□□□□□ -1.63
GTF2I-221ENST00000621734 KRTAP19-6Q3LI70 58 aa4.86□□□□□ -1.63
GTF2I-221ENST00000621734 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
GTF2I-221ENST00000621734 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms