RNA–Protein interactions for RNA: ENST00000620882.4

LRRC39-204, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-204ENST00000620882 TENM2Q9NT68 2774 aa0.89□□□□□ -2.27
LRRC39-204ENST00000620882 COL7A1Q02388 2944 aa0.89□□□□□ -2.27
LRRC39-204ENST00000620882 TNXBP22105 4242 aa0.88□□□□□ -2.27
LRRC39-204ENST00000620882 TENM3Q9P273 2699 aa0.88□□□□□ -2.27
LRRC39-204ENST00000620882 LAMA5O15230 3695 aa0.88□□□□□ -2.27
LRRC39-204ENST00000620882 SPTAN1Q13813 2472 aaKnown RBP0.87□□□□□ -2.27
LRRC39-204ENST00000620882 MXRA5Q9NR99 2828 aa0.87□□□□□ -2.27
LRRC39-204ENST00000620882 DEFB131AP59861 70 aa0.87□□□□□ -2.27
LRRC39-204ENST00000620882 VPS13BQ7Z7G8 4022 aa0.87□□□□□ -2.27
LRRC39-204ENST00000620882 VPS13DQ5THJ4 4388 aa0.86□□□□□ -2.27
LRRC39-204ENST00000620882 PRKDCP78527 4128 aaKnown RBP0.86□□□□□ -2.27
LRRC39-204ENST00000620882 C5orf42Q9H799 3197 aa0.86□□□□□ -2.27
LRRC39-204ENST00000620882 USH2AO75445 5202 aa0.86□□□□□ -2.27
LRRC39-204ENST00000620882 MGAM2Q2M2H8 2515 aa0.86□□□□□ -2.27
LRRC39-204ENST00000620882 SYNE1Q8NF91 8797 aaKnown RBP0.86□□□□□ -2.27
LRRC39-204ENST00000620882 PRM1P04553 51 aa0.85□□□□□ -2.27
LRRC39-204ENST00000620882 DNAH8Q96JB1 4490 aa0.84□□□□□ -2.27
LRRC39-204ENST00000620882 BOD1L1Q8NFC6 3051 aa0.84□□□□□ -2.27
LRRC39-204ENST00000620882 APC2O95996 2303 aa0.84□□□□□ -2.28
LRRC39-204ENST00000620882 DEFB135Q30KP9 77 aa0.83□□□□□ -2.28
LRRC39-204ENST00000620882 LINC01590Q5TEZ4 76 aa0.83□□□□□ -2.28
LRRC39-204ENST00000620882 TLN2Q9Y4G6 2542 aa0.83□□□□□ -2.28
LRRC39-204ENST00000620882 PKHD1L1Q86WI1 4243 aa0.83□□□□□ -2.28
LRRC39-204ENST00000620882 HTTP42858 3142 aa0.82□□□□□ -2.28
LRRC39-204ENST00000620882 ATMQ13315 3056 aa0.82□□□□□ -2.28
LRRC39-204ENST00000620882 HSPG2P98160 4391 aa0.81□□□□□ -2.28
LRRC39-204ENST00000620882 M0QY20 66 aa0.81□□□□□ -2.28
LRRC39-204ENST00000620882 TOMM7Q9P0U1 55 aa0.81□□□□□ -2.28
LRRC39-204ENST00000620882 SACSQ9NZJ4 4579 aa0.81□□□□□ -2.28
LRRC39-204ENST00000620882 DMXL2Q8TDJ6 3036 aa0.8□□□□□ -2.28
LRRC39-204ENST00000620882 MKI67P46013 3256 aaKnown RBP0.8□□□□□ -2.28
LRRC39-204ENST00000620882 HECTD4Q9Y4D8 3996 aa0.8□□□□□ -2.28
LRRC39-204ENST00000620882 M0R2T5 61 aa0.79□□□□□ -2.28
LRRC39-204ENST00000620882 HIVEP1P15822 2718 aa0.78□□□□□ -2.28
LRRC39-204ENST00000620882 TRIOO75962 3097 aa0.78□□□□□ -2.28
LRRC39-204ENST00000620882 SPINK6Q6UWN8 80 aa0.78□□□□□ -2.28
LRRC39-204ENST00000620882 CSMD1Q96PZ7 3565 aa0.78□□□□□ -2.28
LRRC39-204ENST00000620882 ADGRG4Q8IZF6 3080 aa0.78□□□□□ -2.29
LRRC39-204ENST00000620882 NOP10Q9NPE3 64 aaKnown RBP0.77□□□□□ -2.29
LRRC39-204ENST00000620882 FAM186AA6NE01 2351 aa0.77□□□□□ -2.29
LRRC39-204ENST00000620882 SMG1Q96Q15 3661 aaKnown RBP0.77□□□□□ -2.29
LRRC39-204ENST00000620882 NBEAQ8NFP9 2946 aa0.77□□□□□ -2.29
LRRC39-204ENST00000620882 LAMA2P24043 3122 aaKnown RBP0.77□□□□□ -2.29
LRRC39-204ENST00000620882 PHGR1C9JFL3 82 aa0.76□□□□□ -2.29
LRRC39-204ENST00000620882 MTORP42345 2549 aa0.76□□□□□ -2.29
LRRC39-204ENST00000620882 PRUNE2Q8WUY3 3088 aa0.76□□□□□ -2.29
LRRC39-204ENST00000620882 CEP250Q9BV73 2442 aa0.76□□□□□ -2.29
LRRC39-204ENST00000620882 H0YGG7 62 aa0.76□□□□□ -2.29
LRRC39-204ENST00000620882 PCNTO95613 3336 aa0.76□□□□□ -2.29
LRRC39-204ENST00000620882 LRP1Q07954 4544 aaKnown RBP0.75□□□□□ -2.29
LRRC39-204ENST00000620882 MUC3AQ02505 3323 aa0.75□□□□□ -2.29
LRRC39-204ENST00000620882 TGP01266 2768 aa0.75□□□□□ -2.29
LRRC39-204ENST00000620882 AKAP9Q99996 3911 aa0.74□□□□□ -2.29
LRRC39-204ENST00000620882 SVEP1Q4LDE5 3571 aa0.73□□□□□ -2.29
LRRC39-204ENST00000620882 HRNRQ86YZ3 2850 aaPredicted RBP0.73□□□□□ -2.29
LRRC39-204ENST00000620882 LRBAP50851 2863 aa0.72□□□□□ -2.29
LRRC39-204ENST00000620882 DYNC2H1Q8NCM8 4307 aaKnown RBP0.72□□□□□ -2.29
LRRC39-204ENST00000620882 HUWE1Q7Z6Z7 4374 aaKnown RBP0.72□□□□□ -2.29
LRRC39-204ENST00000620882 DNAH12Q6ZR08 3092 aa0.72□□□□□ -2.29
LRRC39-204ENST00000620882 PRCDQ00LT1 54 aa0.72□□□□□ -2.29
LRRC39-204ENST00000620882 XIRP2A4UGR9 3374 aa0.71□□□□□ -2.3
LRRC39-204ENST00000620882 EYSQ5T1H1 3165 aa0.71□□□□□ -2.3
LRRC39-204ENST00000620882 U3KQA8 63 aa0.71□□□□□ -2.3
LRRC39-204ENST00000620882 WDR87Q6ZQQ6 2873 aa0.71□□□□□ -2.3
LRRC39-204ENST00000620882 CFAP47Q6ZTR5 3102 aa0.71□□□□□ -2.3
LRRC39-204ENST00000620882 DMDP11532 3685 aa0.7□□□□□ -2.3
LRRC39-204ENST00000620882 DNAH3Q8TD57 4116 aa0.7□□□□□ -2.3
LRRC39-204ENST00000620882 FLGP20930 4061 aaPredicted RBP0.7□□□□□ -2.3
LRRC39-204ENST00000620882 DNAH2Q9P225 4427 aa0.69□□□□□ -2.3
LRRC39-204ENST00000620882 PKD1P98161 4303 aa0.69□□□□□ -2.3
LRRC39-204ENST00000620882 H3BNG1 76 aa0.69□□□□□ -2.3
LRRC39-204ENST00000620882 MAP1AP78559 2803 aaPredicted RBP0.69□□□□□ -2.3
LRRC39-204ENST00000620882 FRYLO94915 3013 aa0.69□□□□□ -2.3
LRRC39-204ENST00000620882 APOBP04114 4563 aaKnown RBP0.69□□□□□ -2.3
LRRC39-204ENST00000620882 ANK3Q12955 4377 aaKnown RBP0.68□□□□□ -2.3
LRRC39-204ENST00000620882 DNAH9Q9NYC9 4486 aa0.68□□□□□ -2.3
LRRC39-204ENST00000620882 MUC12Q9UKN1 5478 aa0.68□□□□□ -2.3
LRRC39-204ENST00000620882 CSMD2Q7Z408 3487 aa0.67□□□□□ -2.3
LRRC39-204ENST00000620882 DCHS1Q96JQ0 3298 aa0.67□□□□□ -2.3
LRRC39-204ENST00000620882 M0QZ58 72 aa0.66□□□□□ -2.3
LRRC39-204ENST00000620882 KRTAP21-1Q3LI58 79 aa0.66□□□□□ -2.3
LRRC39-204ENST00000620882 FAT1Q14517 4588 aa0.65□□□□□ -2.3
LRRC39-204ENST00000620882 LRP1BQ9NZR2 4599 aa0.64□□□□□ -2.31
LRRC39-204ENST00000620882 LAMA3Q16787 3333 aa0.64□□□□□ -2.31
LRRC39-204ENST00000620882 LAMA1P25391 3075 aa0.64□□□□□ -2.31
LRRC39-204ENST00000620882 DNAH7Q8WXX0 4024 aa0.64□□□□□ -2.31
LRRC39-204ENST00000620882 DNAH6Q9C0G6 4158 aa0.64□□□□□ -2.31
LRRC39-204ENST00000620882 FREM2Q5SZK8 3169 aa0.61□□□□□ -2.31
LRRC39-204ENST00000620882 TNP1P09430 55 aa0.61□□□□□ -2.31
LRRC39-204ENST00000620882 DEFB110Q30KQ9 67 aa0.61□□□□□ -2.31
LRRC39-204ENST00000620882 DNAH10Q8IVF4 4471 aa0.61□□□□□ -2.31
LRRC39-204ENST00000620882 SPEGQ15772 3267 aa0.6□□□□□ -2.31
LRRC39-204ENST00000620882 VCANP13611 3396 aa0.6□□□□□ -2.31
LRRC39-204ENST00000620882 K7EIM0 57 aa0.59□□□□□ -2.31
LRRC39-204ENST00000620882 EP400Q96L91 3159 aa0.59□□□□□ -2.31
LRRC39-204ENST00000620882 STARD9Q9P2P6 4700 aa0.59□□□□□ -2.31
LRRC39-204ENST00000620882 RPL39P5Q59GN2 51 aa0.59□□□□□ -2.32
LRRC39-204ENST00000620882 NIPBLQ6KC79 2804 aaeCLIP0.59□□□□□ -2.32
LRRC39-204ENST00000620882 DNAH1Q9P2D7 4330 aa0.58□□□□□ -2.32
LRRC39-204ENST00000620882 C9orf92A6NGG3 77 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms