RNA–Protein interactions for RNA: ENST00000619773.1

HSDL1-208, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

Gene HSDL1, Length 3,059 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-208ENST00000619773 RYR3Q15413 4870 aa4.43□□□□□ -1.7
HSDL1-208ENST00000619773 SACSQ9NZJ4 4579 aa4.43□□□□□ -1.7
HSDL1-208ENST00000619773 RPL37P61927 97 aaKnown RBP4.42□□□□□ -1.7
HSDL1-208ENST00000619773 NDUFAF8A1L188 74 aa4.42□□□□□ -1.7
HSDL1-208ENST00000619773 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
HSDL1-208ENST00000619773 RYR2Q92736 4967 aa4.38□□□□□ -1.71
HSDL1-208ENST00000619773 KRTAP3-3Q9BYR6 98 aa4.35□□□□□ -1.71
HSDL1-208ENST00000619773 MYCBP2O75592 4640 aa4.35□□□□□ -1.71
HSDL1-208ENST00000619773 DYNC1H1Q14204 4646 aaKnown RBP4.35□□□□□ -1.71
HSDL1-208ENST00000619773 KRTAP3-2Q9BYR7 98 aa4.33□□□□□ -1.72
HSDL1-208ENST00000619773 KRTAP12-2P59991 146 aa4.33□□□□□ -1.72
HSDL1-208ENST00000619773 KRTAP10-8P60410 259 aa4.33□□□□□ -1.72
HSDL1-208ENST00000619773 RPS29P62273 56 aaKnown RBP4.32□□□□□ -1.72
HSDL1-208ENST00000619773 S4R3F8 94 aa4.32□□□□□ -1.72
HSDL1-208ENST00000619773 EPPK1P58107 5090 aaKnown RBP4.31□□□□□ -1.72
HSDL1-208ENST00000619773 HSPG2P98160 4391 aa4.3□□□□□ -1.72
HSDL1-208ENST00000619773 KRTAP15-1Q3LI76 137 aa4.29□□□□□ -1.72
HSDL1-208ENST00000619773 LRP1Q07954 4544 aaKnown RBP4.29□□□□□ -1.72
HSDL1-208ENST00000619773 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
HSDL1-208ENST00000619773 KIAA1109Q2LD37 5005 aa4.24□□□□□ -1.73
HSDL1-208ENST00000619773 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
HSDL1-208ENST00000619773 FAT3Q8TDW7 4589 aa4.21□□□□□ -1.73
HSDL1-208ENST00000619773 KRTAP10-4P60372 401 aaPredicted RBP4.21□□□□□ -1.74
HSDL1-208ENST00000619773 LPAP08519 4548 aa4.21□□□□□ -1.74
HSDL1-208ENST00000619773 XP32Q5T750 250 aa4.18□□□□□ -1.74
HSDL1-208ENST00000619773 A0A1B0GVY2 172 aa4.18□□□□□ -1.74
HSDL1-208ENST00000619773 TNXBP22105 4242 aa4.13□□□□□ -1.75
HSDL1-208ENST00000619773 KRTAP17-1Q9BYP8 105 aa4.11□□□□□ -1.75
HSDL1-208ENST00000619773 M0QZ58 72 aa4.1□□□□□ -1.75
HSDL1-208ENST00000619773 LRP2P98164 4655 aa4.1□□□□□ -1.75
HSDL1-208ENST00000619773 RYR1P21817 5038 aa4.09□□□□□ -1.75
HSDL1-208ENST00000619773 BIRC6Q9NR09 4857 aa4.08□□□□□ -1.76
HSDL1-208ENST00000619773 KRTAP4-5Q9BYR2 181 aa4.08□□□□□ -1.76
HSDL1-208ENST00000619773 LCE2DQ5TA82 110 aaPredicted RBP4.06□□□□□ -1.76
HSDL1-208ENST00000619773 Q5VSD8 79 aa4.06□□□□□ -1.76
HSDL1-208ENST00000619773 R4GN34 69 aa4.05□□□□□ -1.76
HSDL1-208ENST00000619773 ABCA13Q86UQ4 5058 aa4.04□□□□□ -1.76
HSDL1-208ENST00000619773 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
HSDL1-208ENST00000619773 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
HSDL1-208ENST00000619773 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
HSDL1-208ENST00000619773 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
HSDL1-208ENST00000619773 LORP23490 312 aaPredicted RBP4.01□□□□□ -1.77
HSDL1-208ENST00000619773 PCLOQ9Y6V0 5065 aa4□□□□□ -1.77
HSDL1-208ENST00000619773 LUZP6Q538Z0 58 aa4□□□□□ -1.77
HSDL1-208ENST00000619773 HERC2O95714 4834 aa4□□□□□ -1.77
HSDL1-208ENST00000619773 J3QL48 77 aa3.91□□□□□ -1.78
HSDL1-208ENST00000619773 MT1HL1P0DM35 61 aa3.91□□□□□ -1.78
HSDL1-208ENST00000619773 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
HSDL1-208ENST00000619773 HERC1Q15751 4861 aa3.9□□□□□ -1.79
HSDL1-208ENST00000619773 MUC17Q685J3 4493 aa3.87□□□□□ -1.79
HSDL1-208ENST00000619773 KRTAP4-1Q9BYQ7 146 aa3.8□□□□□ -1.8
HSDL1-208ENST00000619773 MUC2Q02817 5179 aa3.78□□□□□ -1.8
HSDL1-208ENST00000619773 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
HSDL1-208ENST00000619773 UBR4Q5T4S7 5183 aa3.73□□□□□ -1.81
HSDL1-208ENST00000619773 RNF213Q63HN8 5207 aa3.72□□□□□ -1.81
HSDL1-208ENST00000619773 SEC61BP60468 96 aaKnown RBP3.71□□□□□ -1.82
HSDL1-208ENST00000619773 TNP1P09430 55 aa3.7□□□□□ -1.82
HSDL1-208ENST00000619773 HMCN2Q8NDA2 5059 aa3.67□□□□□ -1.82
HSDL1-208ENST00000619773 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
HSDL1-208ENST00000619773 FAT4Q6V0I7 4981 aa3.59□□□□□ -1.84
HSDL1-208ENST00000619773 SPRR5A0A1B0GTR4 108 aa3.58□□□□□ -1.84
HSDL1-208ENST00000619773 FLGP20930 4061 aaPredicted RBP3.56□□□□□ -1.84
HSDL1-208ENST00000619773 LCE3AQ5TA76 89 aa3.54□□□□□ -1.84
HSDL1-208ENST00000619773 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
HSDL1-208ENST00000619773 KRTAP4-8Q9BYQ9 185 aa3.46□□□□□ -1.86
HSDL1-208ENST00000619773 M0R2T5 61 aa3.46□□□□□ -1.86
HSDL1-208ENST00000619773 PRO2289Q9P1D8 64 aa3.44□□□□□ -1.86
HSDL1-208ENST00000619773 KRTAP19-1Q8IUB9 90 aa3.43□□□□□ -1.86
HSDL1-208ENST00000619773 LCE2BO14633 110 aa3.4□□□□□ -1.86
HSDL1-208ENST00000619773 SPRR2GQ9BYE4 73 aa3.38□□□□□ -1.87
HSDL1-208ENST00000619773 KRTAP10-10P60014 251 aa3.37□□□□□ -1.87
HSDL1-208ENST00000619773 LCE2CQ5TA81 110 aa3.35□□□□□ -1.87
HSDL1-208ENST00000619773 MT1FP04733 61 aa3.33□□□□□ -1.88
HSDL1-208ENST00000619773 INE1O15225 51 aa3.32□□□□□ -1.88
HSDL1-208ENST00000619773 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
HSDL1-208ENST00000619773 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
HSDL1-208ENST00000619773 FSIP2Q5CZC0 6907 aa3.3□□□□□ -1.88
HSDL1-208ENST00000619773 KRTAP4-8A0A0G2JLE6 195 aa3.28□□□□□ -1.88
HSDL1-208ENST00000619773 MT2AP02795 61 aa3.28□□□□□ -1.88
HSDL1-208ENST00000619773 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
HSDL1-208ENST00000619773 MT1HP80294 61 aa3.27□□□□□ -1.89
HSDL1-208ENST00000619773 KRTAP10-5P60370 271 aa3.26□□□□□ -1.89
HSDL1-208ENST00000619773 KRTAP10-7P60409 375 aaPredicted RBP3.26□□□□□ -1.89
HSDL1-208ENST00000619773 MT1XP80297 61 aa3.25□□□□□ -1.89
HSDL1-208ENST00000619773 KRTAP4-7Q9BYR0 210 aa3.25□□□□□ -1.89
HSDL1-208ENST00000619773 KRTAP9-2Q9BYQ4 174 aa3.24□□□□□ -1.89
HSDL1-208ENST00000619773 KMT2DO14686 5537 aa3.24□□□□□ -1.89
HSDL1-208ENST00000619773 MT1BP07438 61 aa3.22□□□□□ -1.89
HSDL1-208ENST00000619773 KRTAP9-6A0A140TA67 174 aa3.21□□□□□ -1.9
HSDL1-208ENST00000619773 KRTAP9-8Q9BYQ0 159 aa3.21□□□□□ -1.9
HSDL1-208ENST00000619773 LCE3BQ5TA77 95 aa3.2□□□□□ -1.9
HSDL1-208ENST00000619773 LCE2AQ5TA79 106 aaPredicted RBP3.19□□□□□ -1.9
HSDL1-208ENST00000619773 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.18□□□□□ -1.9
HSDL1-208ENST00000619773 KRTAP19-8Q3LI54 63 aa3.17□□□□□ -1.9
HSDL1-208ENST00000619773 USH2AO75445 5202 aa3.16□□□□□ -1.9
HSDL1-208ENST00000619773 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
HSDL1-208ENST00000619773 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
HSDL1-208ENST00000619773 LCE1DQ5T752 114 aa3.1□□□□□ -1.91
HSDL1-208ENST00000619773 KRTAP9-6A8MVA2 160 aa3.09□□□□□ -1.91
HSDL1-208ENST00000619773 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 168.6 ms