RNA–Protein interactions for RNA: ENST00000619541.4

SYNRG-225, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 3,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-225ENST00000619541 RPL37P61927 97 aaKnown RBP7.77□□□□□ -1.17
SYNRG-225ENST00000619541 APOBP04114 4563 aaKnown RBP7.75□□□□□ -1.17
SYNRG-225ENST00000619541 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
SYNRG-225ENST00000619541 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
SYNRG-225ENST00000619541 RYR3Q15413 4870 aa7.65□□□□□ -1.18
SYNRG-225ENST00000619541 KRTAP10-4P60372 401 aaPredicted RBP7.65□□□□□ -1.19
SYNRG-225ENST00000619541 KRTAP13-4Q3LI77 160 aa7.64□□□□□ -1.19
SYNRG-225ENST00000619541 KRTAP10-6P60371 365 aaPredicted RBP7.55□□□□□ -1.2
SYNRG-225ENST00000619541 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
SYNRG-225ENST00000619541 KRTAP15-1Q3LI76 137 aa7.51□□□□□ -1.21
SYNRG-225ENST00000619541 HSPG2P98160 4391 aa7.51□□□□□ -1.21
SYNRG-225ENST00000619541 S4R3F8 94 aa7.51□□□□□ -1.21
SYNRG-225ENST00000619541 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
SYNRG-225ENST00000619541 KRTAP17-1Q9BYP8 105 aa7.47□□□□□ -1.21
SYNRG-225ENST00000619541 KIAA1109Q2LD37 5005 aa7.46□□□□□ -1.21
SYNRG-225ENST00000619541 KRTAP12-2P59991 146 aa7.46□□□□□ -1.22
SYNRG-225ENST00000619541 RPS29P62273 56 aaKnown RBP7.46□□□□□ -1.22
SYNRG-225ENST00000619541 Q5VSD8 79 aa7.43□□□□□ -1.22
SYNRG-225ENST00000619541 RYR1P21817 5038 aa7.43□□□□□ -1.22
SYNRG-225ENST00000619541 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
SYNRG-225ENST00000619541 KRTAP3-2Q9BYR7 98 aa7.42□□□□□ -1.22
SYNRG-225ENST00000619541 EPPK1P58107 5090 aaKnown RBP7.39□□□□□ -1.23
SYNRG-225ENST00000619541 TNXBP22105 4242 aa7.38□□□□□ -1.23
SYNRG-225ENST00000619541 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
SYNRG-225ENST00000619541 A0A0A0MQY5 61 aa7.34□□□□□ -1.23
SYNRG-225ENST00000619541 KRTAP10-8P60410 259 aa7.34□□□□□ -1.24
SYNRG-225ENST00000619541 FAT3Q8TDW7 4589 aa7.32□□□□□ -1.24
SYNRG-225ENST00000619541 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
SYNRG-225ENST00000619541 LUZP6Q538Z0 58 aa7.22□□□□□ -1.25
SYNRG-225ENST00000619541 XP32Q5T750 250 aa7.2□□□□□ -1.26
SYNRG-225ENST00000619541 MT1HL1P0DM35 61 aa7.2□□□□□ -1.26
SYNRG-225ENST00000619541 KRTAP4-5Q9BYR2 181 aa7.16□□□□□ -1.26
SYNRG-225ENST00000619541 M0QZ58 72 aa7.13□□□□□ -1.27
SYNRG-225ENST00000619541 PLAC4Q8WY50 150 aa7.13□□□□□ -1.27
SYNRG-225ENST00000619541 R4GN34 69 aa7.07□□□□□ -1.28
SYNRG-225ENST00000619541 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
SYNRG-225ENST00000619541 LRP2P98164 4655 aa7.02□□□□□ -1.29
SYNRG-225ENST00000619541 LPAP08519 4548 aa7.01□□□□□ -1.29
SYNRG-225ENST00000619541 HERC2O95714 4834 aa6.94□□□□□ -1.3
SYNRG-225ENST00000619541 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
SYNRG-225ENST00000619541 BIRC6Q9NR09 4857 aa6.84□□□□□ -1.31
SYNRG-225ENST00000619541 J3QL48 77 aa6.83□□□□□ -1.32
SYNRG-225ENST00000619541 LORP23490 312 aaPredicted RBP6.79□□□□□ -1.32
SYNRG-225ENST00000619541 PCLOQ9Y6V0 5065 aa6.69□□□□□ -1.34
SYNRG-225ENST00000619541 HERC1Q15751 4861 aa6.68□□□□□ -1.34
SYNRG-225ENST00000619541 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
SYNRG-225ENST00000619541 PP632Q6XCG6 107 aa6.66□□□□□ -1.34
SYNRG-225ENST00000619541 MUC2Q02817 5179 aa6.64□□□□□ -1.35
SYNRG-225ENST00000619541 MUC17Q685J3 4493 aa6.63□□□□□ -1.35
SYNRG-225ENST00000619541 SEC61BP60468 96 aaKnown RBP6.63□□□□□ -1.35
SYNRG-225ENST00000619541 HMCN2Q8NDA2 5059 aa6.51□□□□□ -1.37
SYNRG-225ENST00000619541 TNP1P09430 55 aa6.49□□□□□ -1.37
SYNRG-225ENST00000619541 KRTAP19-2Q3LHN2 52 aa6.45□□□□□ -1.38
SYNRG-225ENST00000619541 FAT4Q6V0I7 4981 aa6.33□□□□□ -1.4
SYNRG-225ENST00000619541 UBR4Q5T4S7 5183 aa6.32□□□□□ -1.4
SYNRG-225ENST00000619541 RNF213Q63HN8 5207 aa6.32□□□□□ -1.4
SYNRG-225ENST00000619541 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
SYNRG-225ENST00000619541 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
SYNRG-225ENST00000619541 LCE2CQ5TA81 110 aa6.2□□□□□ -1.42
SYNRG-225ENST00000619541 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
SYNRG-225ENST00000619541 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
SYNRG-225ENST00000619541 LCE3AQ5TA76 89 aa6.07□□□□□ -1.44
SYNRG-225ENST00000619541 M0R2T5 61 aa6.05□□□□□ -1.44
SYNRG-225ENST00000619541 MT1HP80294 61 aa6.04□□□□□ -1.44
SYNRG-225ENST00000619541 INE1O15225 51 aa5.97□□□□□ -1.45
SYNRG-225ENST00000619541 MT1FP04733 61 aa5.88□□□□□ -1.47
SYNRG-225ENST00000619541 MT2AP02795 61 aa5.88□□□□□ -1.47
SYNRG-225ENST00000619541 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
SYNRG-225ENST00000619541 KRTAP9-8Q9BYQ0 159 aa5.87□□□□□ -1.47
SYNRG-225ENST00000619541 KRTAP10-10P60014 251 aa5.86□□□□□ -1.47
SYNRG-225ENST00000619541 SPRR2GQ9BYE4 73 aa5.83□□□□□ -1.48
SYNRG-225ENST00000619541 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
SYNRG-225ENST00000619541 KRTAP8-1Q8IUC2 63 aa5.72□□□□□ -1.49
SYNRG-225ENST00000619541 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
SYNRG-225ENST00000619541 KRTAP9-3Q9BYQ3 159 aa5.63□□□□□ -1.51
SYNRG-225ENST00000619541 KRTAP19-8Q3LI54 63 aa5.61□□□□□ -1.51
SYNRG-225ENST00000619541 MT1BP07438 61 aa5.61□□□□□ -1.51
SYNRG-225ENST00000619541 LCE2AQ5TA79 106 aaPredicted RBP5.56□□□□□ -1.52
SYNRG-225ENST00000619541 USH2AO75445 5202 aa5.52□□□□□ -1.53
SYNRG-225ENST00000619541 KRTAP10-5P60370 271 aa5.51□□□□□ -1.53
SYNRG-225ENST00000619541 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
SYNRG-225ENST00000619541 MT1XP80297 61 aa5.5□□□□□ -1.53
SYNRG-225ENST00000619541 LCE2BO14633 110 aa5.48□□□□□ -1.53
SYNRG-225ENST00000619541 KRTAP19-5Q3LI72 72 aa5.36□□□□□ -1.55
SYNRG-225ENST00000619541 LCE3CQ5T5A8 94 aa5.36□□□□□ -1.55
SYNRG-225ENST00000619541 KMT2DO14686 5537 aa5.33□□□□□ -1.56
SYNRG-225ENST00000619541 FSIP2Q5CZC0 6907 aa5.23□□□□□ -1.57
SYNRG-225ENST00000619541 KRTAP9-6A8MVA2 160 aa5.22□□□□□ -1.57
SYNRG-225ENST00000619541 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
SYNRG-225ENST00000619541 KRTAP4-8A0A0G2JLE6 195 aa5.16□□□□□ -1.58
SYNRG-225ENST00000619541 KRTAP4-8Q9BYQ9 185 aa5.16□□□□□ -1.58
SYNRG-225ENST00000619541 SSPOA2VEC9 5147 aa5.15□□□□□ -1.58
SYNRG-225ENST00000619541 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
SYNRG-225ENST00000619541 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
SYNRG-225ENST00000619541 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
SYNRG-225ENST00000619541 KRTAP19-6Q3LI70 58 aa4.95□□□□□ -1.62
SYNRG-225ENST00000619541 CRCT1Q9UGL9 99 aa4.91□□□□□ -1.62
SYNRG-225ENST00000619541 KRTAP19-7Q3SYF9 63 aa4.9□□□□□ -1.62
SYNRG-225ENST00000619541 FCGBPQ9Y6R7 5405 aaPredicted RBP4.88□□□□□ -1.63
SYNRG-225ENST00000619541 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms