RNA–Protein interactions for RNA: ENST00000619121.4

CSMD2-210, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD2, Length 13,430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-210ENST00000619121 KRTAP15-1Q3LI76 137 aa3.43□□□□□ -1.86
CSMD2-210ENST00000619121 CSMD2Q7Z408 3487 aa3.42□□□□□ -1.86
CSMD2-210ENST00000619121 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
CSMD2-210ENST00000619121 KRTAP12-1P59990 96 aa3.42□□□□□ -1.86
CSMD2-210ENST00000619121 KRTAP12-2P59991 146 aa3.42□□□□□ -1.86
CSMD2-210ENST00000619121 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
CSMD2-210ENST00000619121 SVEP1Q4LDE5 3571 aa3.37□□□□□ -1.87
CSMD2-210ENST00000619121 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
CSMD2-210ENST00000619121 CSMD3Q7Z407 3707 aa3.35□□□□□ -1.87
CSMD2-210ENST00000619121 CUBNO60494 3623 aa3.33□□□□□ -1.88
CSMD2-210ENST00000619121 FAT2Q9NYQ8 4349 aa3.31□□□□□ -1.88
CSMD2-210ENST00000619121 DYNC2H1Q8NCM8 4307 aaKnown RBP3.3□□□□□ -1.88
CSMD2-210ENST00000619121 DNAH9Q9NYC9 4486 aa3.29□□□□□ -1.88
CSMD2-210ENST00000619121 PKHD1L1Q86WI1 4243 aa3.24□□□□□ -1.89
CSMD2-210ENST00000619121 KRTAP10-6P60371 365 aaPredicted RBP3.19□□□□□ -1.9
CSMD2-210ENST00000619121 PKHD1P08F94 4074 aa3.18□□□□□ -1.9
CSMD2-210ENST00000619121 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
CSMD2-210ENST00000619121 DNAH11Q96DT5 4516 aa3.15□□□□□ -1.91
CSMD2-210ENST00000619121 KRTAP3-1Q9BYR8 98 aa3.14□□□□□ -1.91
CSMD2-210ENST00000619121 MT1HL1P0DM35 61 aa3.13□□□□□ -1.91
CSMD2-210ENST00000619121 DNAH17Q9UFH2 4485 aa3.1□□□□□ -1.91
CSMD2-210ENST00000619121 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
CSMD2-210ENST00000619121 DNAH8Q96JB1 4490 aa3.1□□□□□ -1.91
CSMD2-210ENST00000619121 PKD1P98161 4303 aa3.04□□□□□ -1.92
CSMD2-210ENST00000619121 SACSQ9NZJ4 4579 aa3.03□□□□□ -1.92
CSMD2-210ENST00000619121 KRTAP3-3Q9BYR6 98 aa3.02□□□□□ -1.93
CSMD2-210ENST00000619121 KRTAP10-7P60409 375 aaPredicted RBP3.01□□□□□ -1.93
CSMD2-210ENST00000619121 MT3P25713 68 aa3□□□□□ -1.93
CSMD2-210ENST00000619121 SPRR2GQ9BYE4 73 aa3□□□□□ -1.93
CSMD2-210ENST00000619121 KRTAP3-2Q9BYR7 98 aa3□□□□□ -1.93
CSMD2-210ENST00000619121 KRTAP10-4P60372 401 aaPredicted RBP2.99□□□□□ -1.93
CSMD2-210ENST00000619121 DNAH5Q8TE73 4624 aa2.99□□□□□ -1.93
CSMD2-210ENST00000619121 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
CSMD2-210ENST00000619121 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
CSMD2-210ENST00000619121 TNXBP22105 4242 aa2.96□□□□□ -1.94
CSMD2-210ENST00000619121 PLECQ15149 4684 aaKnown RBP2.95□□□□□ -1.94
CSMD2-210ENST00000619121 LCE3AQ5TA76 89 aa2.92□□□□□ -1.94
CSMD2-210ENST00000619121 DYNC1H1Q14204 4646 aaKnown RBP2.91□□□□□ -1.94
CSMD2-210ENST00000619121 STARD9Q9P2P6 4700 aa2.88□□□□□ -1.95
CSMD2-210ENST00000619121 HSPG2P98160 4391 aa2.88□□□□□ -1.95
CSMD2-210ENST00000619121 APOBP04114 4563 aaKnown RBP2.86□□□□□ -1.95
CSMD2-210ENST00000619121 LRP1BQ9NZR2 4599 aa2.86□□□□□ -1.95
CSMD2-210ENST00000619121 FAT3Q8TDW7 4589 aa2.84□□□□□ -1.96
CSMD2-210ENST00000619121 KRTAP10-5P60370 271 aa2.83□□□□□ -1.96
CSMD2-210ENST00000619121 KRTAP12-4P60329 112 aa2.81□□□□□ -1.96
CSMD2-210ENST00000619121 MT1HP80294 61 aa2.81□□□□□ -1.96
CSMD2-210ENST00000619121 LCE3CQ5T5A8 94 aa2.79□□□□□ -1.96
CSMD2-210ENST00000619121 LRP1Q07954 4544 aaKnown RBP2.78□□□□□ -1.96
CSMD2-210ENST00000619121 SPRR2FQ96RM1 72 aa2.74□□□□□ -1.97
CSMD2-210ENST00000619121 KRTAP19-8Q3LI54 63 aa2.71□□□□□ -1.98
CSMD2-210ENST00000619121 LCE2BO14633 110 aa2.7□□□□□ -1.98
CSMD2-210ENST00000619121 KRTAP4-5Q9BYR2 181 aa2.68□□□□□ -1.98
CSMD2-210ENST00000619121 MT1GP13640 62 aa2.67□□□□□ -1.98
CSMD2-210ENST00000619121 MT2AP02795 61 aa2.65□□□□□ -1.99
CSMD2-210ENST00000619121 SPRR2EP22531 72 aa2.64□□□□□ -1.99
CSMD2-210ENST00000619121 SPRR2BP35325 72 aa2.64□□□□□ -1.99
CSMD2-210ENST00000619121 SPRR2AP35326 72 aa2.64□□□□□ -1.99
CSMD2-210ENST00000619121 FAT1Q14517 4588 aa2.64□□□□□ -1.99
CSMD2-210ENST00000619121 MT1FP04733 61 aa2.62□□□□□ -1.99
CSMD2-210ENST00000619121 KRTAP19-5Q3LI72 72 aa2.62□□□□□ -1.99
CSMD2-210ENST00000619121 SPRR2DP22532 72 aa2.61□□□□□ -1.99
CSMD2-210ENST00000619121 LCE2CQ5TA81 110 aa2.58□□□□□ -2
CSMD2-210ENST00000619121 MYCBP2O75592 4640 aa2.55□□□□□ -2
CSMD2-210ENST00000619121 RYR1P21817 5038 aa2.53□□□□□ -2
CSMD2-210ENST00000619121 MT1LQ93083 61 aa2.53□□□□□ -2
CSMD2-210ENST00000619121 LCE3DQ9BYE3 92 aa2.5□□□□□ -2.01
CSMD2-210ENST00000619121 MUC17Q685J3 4493 aa2.49□□□□□ -2.01
CSMD2-210ENST00000619121 KRTAP4-1Q9BYQ7 146 aa2.46□□□□□ -2.02
CSMD2-210ENST00000619121 LCE3EQ5T5B0 92 aa2.46□□□□□ -2.02
CSMD2-210ENST00000619121 MT1EP04732 61 aa2.45□□□□□ -2.02
CSMD2-210ENST00000619121 RYR3Q15413 4870 aa2.45□□□□□ -2.02
CSMD2-210ENST00000619121 PCLOQ9Y6V0 5065 aa2.44□□□□□ -2.02
CSMD2-210ENST00000619121 KRTAP19-3Q7Z4W3 81 aa2.44□□□□□ -2.02
CSMD2-210ENST00000619121 DNHD1Q96M86 4753 aa2.43□□□□□ -2.02
CSMD2-210ENST00000619121 KRTAP19-1Q8IUB9 90 aa2.43□□□□□ -2.02
CSMD2-210ENST00000619121 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
CSMD2-210ENST00000619121 MT1XP80297 61 aa2.42□□□□□ -2.02
CSMD2-210ENST00000619121 KRTAP9-8Q9BYQ0 159 aa2.41□□□□□ -2.02
CSMD2-210ENST00000619121 LCE2DQ5TA82 110 aaPredicted RBP2.4□□□□□ -2.03
CSMD2-210ENST00000619121 MT1MQ8N339 61 aa2.38□□□□□ -2.03
CSMD2-210ENST00000619121 KRTAP19-6Q3LI70 58 aa2.37□□□□□ -2.03
CSMD2-210ENST00000619121 LCE1AQ5T7P2 110 aa2.37□□□□□ -2.03
CSMD2-210ENST00000619121 LCE3BQ5TA77 95 aa2.36□□□□□ -2.03
CSMD2-210ENST00000619121 MT1BP07438 61 aa2.35□□□□□ -2.03
CSMD2-210ENST00000619121 KRTAP9-3Q9BYQ3 159 aa2.34□□□□□ -2.03
CSMD2-210ENST00000619121 LCE4AQ5TA78 99 aa2.3□□□□□ -2.04
CSMD2-210ENST00000619121 HYDINQ4G0P3 5121 aa2.27□□□□□ -2.05
CSMD2-210ENST00000619121 MT1AP04731 61 aa2.26□□□□□ -2.05
CSMD2-210ENST00000619121 HERC2O95714 4834 aa2.25□□□□□ -2.05
CSMD2-210ENST00000619121 RYR2Q92736 4967 aa2.25□□□□□ -2.05
CSMD2-210ENST00000619121 KRTAP9-2Q9BYQ4 174 aa2.22□□□□□ -2.05
CSMD2-210ENST00000619121 LRP2P98164 4655 aa2.21□□□□□ -2.05
CSMD2-210ENST00000619121 LPAP08519 4548 aa2.21□□□□□ -2.06
CSMD2-210ENST00000619121 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
CSMD2-210ENST00000619121 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
CSMD2-210ENST00000619121 KRTAP20-1Q3LI63 56 aa2.18□□□□□ -2.06
CSMD2-210ENST00000619121 KRTAP17-1Q9BYP8 105 aa2.17□□□□□ -2.06
CSMD2-210ENST00000619121 KRTAP6-3Q3LI67 103 aa2.17□□□□□ -2.06
CSMD2-210ENST00000619121 BIRC6Q9NR09 4857 aa2.16□□□□□ -2.06
CSMD2-210ENST00000619121 KRTAP9-6A0A140TA67 174 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms