RNA–Protein interactions for RNA: ENST00000618014.1

CCNA2-202, Transcript of cyclin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNA2, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA2-202ENST00000618014 KRTAP3-2Q9BYR7 98 aa8.33□□□□□ -1.08
CCNA2-202ENST00000618014 PKHD1P08F94 4074 aa8.28□□□□□ -1.08
CCNA2-202ENST00000618014 PKHD1L1Q86WI1 4243 aa8.26□□□□□ -1.09
CCNA2-202ENST00000618014 S4R3F8 94 aa8.26□□□□□ -1.09
CCNA2-202ENST00000618014 DMBT1Q9UGM3 2413 aaPredicted RBP8.24□□□□□ -1.09
CCNA2-202ENST00000618014 KRTAP12-2P59991 146 aa8.2□□□□□ -1.1
CCNA2-202ENST00000618014 KMT2CQ8NEZ4 4911 aaKnown RBP8.19□□□□□ -1.1
CCNA2-202ENST00000618014 RYR2Q92736 4967 aa8.18□□□□□ -1.1
CCNA2-202ENST00000618014 XP32Q5T750 250 aa8.11□□□□□ -1.11
CCNA2-202ENST00000618014 KRTAP12-1P59990 96 aa8.11□□□□□ -1.11
CCNA2-202ENST00000618014 SMR3BP02814 79 aaPredicted RBP8.1□□□□□ -1.11
CCNA2-202ENST00000618014 APOBP04114 4563 aaKnown RBP8.1□□□□□ -1.11
CCNA2-202ENST00000618014 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
CCNA2-202ENST00000618014 DYNC1H1Q14204 4646 aaKnown RBP8.07□□□□□ -1.12
CCNA2-202ENST00000618014 FAT1Q14517 4588 aa8.07□□□□□ -1.12
CCNA2-202ENST00000618014 KRTAP10-8P60410 259 aa8.05□□□□□ -1.12
CCNA2-202ENST00000618014 KRTAP10-4P60372 401 aaPredicted RBP8.03□□□□□ -1.12
CCNA2-202ENST00000618014 RYR3Q15413 4870 aa8□□□□□ -1.13
CCNA2-202ENST00000618014 LRP1Q07954 4544 aaKnown RBP7.96□□□□□ -1.13
CCNA2-202ENST00000618014 FAT3Q8TDW7 4589 aa7.95□□□□□ -1.14
CCNA2-202ENST00000618014 M0QZ58 72 aa7.94□□□□□ -1.14
CCNA2-202ENST00000618014 HSPG2P98160 4391 aa7.92□□□□□ -1.14
CCNA2-202ENST00000618014 TNXBP22105 4242 aa7.87□□□□□ -1.15
CCNA2-202ENST00000618014 A0A0A0MQY5 61 aa7.86□□□□□ -1.15
CCNA2-202ENST00000618014 PLAC4Q8WY50 150 aa7.8□□□□□ -1.16
CCNA2-202ENST00000618014 LUZP6Q538Z0 58 aa7.76□□□□□ -1.17
CCNA2-202ENST00000618014 RYR1P21817 5038 aa7.72□□□□□ -1.17
CCNA2-202ENST00000618014 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.18
CCNA2-202ENST00000618014 MYCBP2O75592 4640 aa7.7□□□□□ -1.18
CCNA2-202ENST00000618014 KIAA1109Q2LD37 5005 aa7.67□□□□□ -1.18
CCNA2-202ENST00000618014 KRTAP17-1Q9BYP8 105 aa7.66□□□□□ -1.18
CCNA2-202ENST00000618014 Q5VSD8 79 aa7.66□□□□□ -1.18
CCNA2-202ENST00000618014 R4GN34 69 aa7.61□□□□□ -1.19
CCNA2-202ENST00000618014 LPAP08519 4548 aa7.6□□□□□ -1.19
CCNA2-202ENST00000618014 PP632Q6XCG6 107 aa7.51□□□□□ -1.21
CCNA2-202ENST00000618014 KRTAP4-5Q9BYR2 181 aa7.42□□□□□ -1.22
CCNA2-202ENST00000618014 LRP2P98164 4655 aa7.41□□□□□ -1.22
CCNA2-202ENST00000618014 LORP23490 312 aaPredicted RBP7.41□□□□□ -1.22
CCNA2-202ENST00000618014 MT1HL1P0DM35 61 aa7.4□□□□□ -1.23
CCNA2-202ENST00000618014 BIRC6Q9NR09 4857 aa7.36□□□□□ -1.23
CCNA2-202ENST00000618014 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
CCNA2-202ENST00000618014 HERC2O95714 4834 aa7.31□□□□□ -1.24
CCNA2-202ENST00000618014 CAMK2N1Q7Z7J9 78 aa7.28□□□□□ -1.24
CCNA2-202ENST00000618014 SPRR5A0A1B0GTR4 108 aa7.2□□□□□ -1.26
CCNA2-202ENST00000618014 KRTAP23-1A1A580 65 aa7.14□□□□□ -1.27
CCNA2-202ENST00000618014 MUC17Q685J3 4493 aa7.13□□□□□ -1.27
CCNA2-202ENST00000618014 J3QL48 77 aa7.11□□□□□ -1.27
CCNA2-202ENST00000618014 TNP1P09430 55 aa7.1□□□□□ -1.27
CCNA2-202ENST00000618014 SEC61BP60468 96 aaKnown RBP7.07□□□□□ -1.28
CCNA2-202ENST00000618014 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.29
CCNA2-202ENST00000618014 MUC2Q02817 5179 aa7□□□□□ -1.29
CCNA2-202ENST00000618014 KRTAP4-1Q9BYQ7 146 aa6.99□□□□□ -1.29
CCNA2-202ENST00000618014 KRTAP19-2Q3LHN2 52 aa6.97□□□□□ -1.29
CCNA2-202ENST00000618014 HERC1Q15751 4861 aa6.91□□□□□ -1.3
CCNA2-202ENST00000618014 PRO2289Q9P1D8 64 aa6.9□□□□□ -1.3
CCNA2-202ENST00000618014 HMCN2Q8NDA2 5059 aa6.81□□□□□ -1.32
CCNA2-202ENST00000618014 FLGP20930 4061 aaPredicted RBP6.76□□□□□ -1.33
CCNA2-202ENST00000618014 INE1O15225 51 aa6.75□□□□□ -1.33
CCNA2-202ENST00000618014 FAT4Q6V0I7 4981 aa6.65□□□□□ -1.34
CCNA2-202ENST00000618014 LCE3AQ5TA76 89 aa6.64□□□□□ -1.35
CCNA2-202ENST00000618014 SPRR2GQ9BYE4 73 aa6.58□□□□□ -1.36
CCNA2-202ENST00000618014 RNF213Q63HN8 5207 aa6.54□□□□□ -1.36
CCNA2-202ENST00000618014 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
CCNA2-202ENST00000618014 KRTAP19-1Q8IUB9 90 aa6.5□□□□□ -1.37
CCNA2-202ENST00000618014 KRTAP8-1Q8IUC2 63 aa6.5□□□□□ -1.37
CCNA2-202ENST00000618014 LCE2CQ5TA81 110 aa6.37□□□□□ -1.39
CCNA2-202ENST00000618014 KRTAP12-3P60328 96 aa6.31□□□□□ -1.4
CCNA2-202ENST00000618014 KRTAP10-12P60413 245 aa6.3□□□□□ -1.4
CCNA2-202ENST00000618014 MT1HP80294 61 aa6.22□□□□□ -1.41
CCNA2-202ENST00000618014 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
CCNA2-202ENST00000618014 KRTAP19-8Q3LI54 63 aa6.19□□□□□ -1.42
CCNA2-202ENST00000618014 M0R2T5 61 aa6.18□□□□□ -1.42
CCNA2-202ENST00000618014 MT1XP80297 61 aa6.17□□□□□ -1.42
CCNA2-202ENST00000618014 MT1FP04733 61 aa6.17□□□□□ -1.42
CCNA2-202ENST00000618014 KRTAP10-10P60014 251 aa6.16□□□□□ -1.42
CCNA2-202ENST00000618014 MT2AP02795 61 aa6.14□□□□□ -1.43
CCNA2-202ENST00000618014 MT1BP07438 61 aa6.09□□□□□ -1.43
CCNA2-202ENST00000618014 KRTAP9-8Q9BYQ0 159 aa6.06□□□□□ -1.44
CCNA2-202ENST00000618014 KRTAP10-7P60409 375 aaPredicted RBP6.04□□□□□ -1.44
CCNA2-202ENST00000618014 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
CCNA2-202ENST00000618014 LCE2AQ5TA79 106 aaPredicted RBP5.93□□□□□ -1.46
CCNA2-202ENST00000618014 KRTAP19-5Q3LI72 72 aa5.87□□□□□ -1.47
CCNA2-202ENST00000618014 USH2AO75445 5202 aa5.86□□□□□ -1.47
CCNA2-202ENST00000618014 KRTAP9-6A8MVA2 160 aa5.8□□□□□ -1.48
CCNA2-202ENST00000618014 KRTAP2-3P0C7H8 128 aa5.8□□□□□ -1.48
CCNA2-202ENST00000618014 KRTAP2-4Q9BYR9 128 aa5.8□□□□□ -1.48
CCNA2-202ENST00000618014 KRTAP2-1Q9BYU5 128 aa5.8□□□□□ -1.48
CCNA2-202ENST00000618014 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
CCNA2-202ENST00000618014 FSIP2Q5CZC0 6907 aa5.7□□□□□ -1.5
CCNA2-202ENST00000618014 KMT2DO14686 5537 aa5.69□□□□□ -1.5
CCNA2-202ENST00000618014 LCE2BO14633 110 aa5.62□□□□□ -1.51
CCNA2-202ENST00000618014 KRTAP4-7Q9BYR0 210 aa5.55□□□□□ -1.52
CCNA2-202ENST00000618014 KRTAP4-8A0A0G2JLE6 195 aa5.54□□□□□ -1.52
CCNA2-202ENST00000618014 KRTAP4-8Q9BYQ9 185 aa5.54□□□□□ -1.52
CCNA2-202ENST00000618014 KRTAP19-4Q3LI73 84 aa5.52□□□□□ -1.53
CCNA2-202ENST00000618014 KRTAP19-7Q3SYF9 63 aa5.5□□□□□ -1.53
CCNA2-202ENST00000618014 MT1LQ93083 61 aa5.37□□□□□ -1.55
CCNA2-202ENST00000618014 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
CCNA2-202ENST00000618014 SSPOA2VEC9 5147 aa5.32□□□□□ -1.56
CCNA2-202ENST00000618014 MT1EP04732 61 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms