RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 SMR3BP02814 79 aaPredicted RBP3.77□□□□□ -1.81
PDE6A-205ENST00000617647 KRTAP10-6P60371 365 aaPredicted RBP3.77□□□□□ -1.81
PDE6A-205ENST00000617647 DNAH2Q9P225 4427 aa3.77□□□□□ -1.81
PDE6A-205ENST00000617647 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
PDE6A-205ENST00000617647 DNAH6Q9C0G6 4158 aa3.76□□□□□ -1.81
PDE6A-205ENST00000617647 XP32Q5T750 250 aa3.75□□□□□ -1.81
PDE6A-205ENST00000617647 KRTAP10-2P60368 255 aa3.75□□□□□ -1.81
PDE6A-205ENST00000617647 MEGF8Q7Z7M0 2845 aa3.75□□□□□ -1.81
PDE6A-205ENST00000617647 DNAH17Q9UFH2 4485 aa3.75□□□□□ -1.81
PDE6A-205ENST00000617647 STARD9Q9P2P6 4700 aa3.74□□□□□ -1.81
PDE6A-205ENST00000617647 KRTAP10-1P60331 282 aa3.72□□□□□ -1.81
PDE6A-205ENST00000617647 KRTAP1-4P0C5Y4 121 aa3.71□□□□□ -1.82
PDE6A-205ENST00000617647 KMT2AQ03164 3969 aa3.68□□□□□ -1.82
PDE6A-205ENST00000617647 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
PDE6A-205ENST00000617647 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
PDE6A-205ENST00000617647 PKD1P98161 4303 aa3.67□□□□□ -1.82
PDE6A-205ENST00000617647 DNAH5Q8TE73 4624 aa3.66□□□□□ -1.82
PDE6A-205ENST00000617647 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
PDE6A-205ENST00000617647 FAT2Q9NYQ8 4349 aa3.61□□□□□ -1.83
PDE6A-205ENST00000617647 KRTAP17-1Q9BYP8 105 aa3.59□□□□□ -1.83
PDE6A-205ENST00000617647 TNP1P09430 55 aa3.54□□□□□ -1.84
PDE6A-205ENST00000617647 Q5VSD8 79 aa3.54□□□□□ -1.84
PDE6A-205ENST00000617647 PKHD1L1Q86WI1 4243 aa3.54□□□□□ -1.84
PDE6A-205ENST00000617647 SACSQ9NZJ4 4579 aa3.53□□□□□ -1.84
PDE6A-205ENST00000617647 LRP1BQ9NZR2 4599 aa3.52□□□□□ -1.85
PDE6A-205ENST00000617647 VPS13BQ7Z7G8 4022 aa3.51□□□□□ -1.85
PDE6A-205ENST00000617647 DNHD1Q96M86 4753 aa3.51□□□□□ -1.85
PDE6A-205ENST00000617647 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
PDE6A-205ENST00000617647 KRTAP9-4Q9BYQ2 154 aa3.51□□□□□ -1.85
PDE6A-205ENST00000617647 HYDINQ4G0P3 5121 aa3.51□□□□□ -1.85
PDE6A-205ENST00000617647 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
PDE6A-205ENST00000617647 PKHD1P08F94 4074 aa3.5□□□□□ -1.85
PDE6A-205ENST00000617647 INE1O15225 51 aa3.49□□□□□ -1.85
PDE6A-205ENST00000617647 KRTAP9-6A0A140TA67 174 aa3.45□□□□□ -1.86
PDE6A-205ENST00000617647 KRTAP9-7A8MTY7 169 aa3.45□□□□□ -1.86
PDE6A-205ENST00000617647 APOBP04114 4563 aaKnown RBP3.45□□□□□ -1.86
PDE6A-205ENST00000617647 TNXBP22105 4242 aa3.39□□□□□ -1.87
PDE6A-205ENST00000617647 KRTAP19-1Q8IUB9 90 aa3.38□□□□□ -1.87
PDE6A-205ENST00000617647 HSPG2P98160 4391 aa3.36□□□□□ -1.87
PDE6A-205ENST00000617647 A0A1B0GVY2 172 aa3.35□□□□□ -1.87
PDE6A-205ENST00000617647 M0R2T5 61 aa3.3□□□□□ -1.88
PDE6A-205ENST00000617647 KRTAP10-4P60372 401 aaPredicted RBP3.3□□□□□ -1.88
PDE6A-205ENST00000617647 DYNC1H1Q14204 4646 aaKnown RBP3.3□□□□□ -1.88
PDE6A-205ENST00000617647 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
PDE6A-205ENST00000617647 FAT3Q8TDW7 4589 aa3.27□□□□□ -1.89
PDE6A-205ENST00000617647 LRP1Q07954 4544 aaKnown RBP3.26□□□□□ -1.89
PDE6A-205ENST00000617647 FAT1Q14517 4588 aa3.26□□□□□ -1.89
PDE6A-205ENST00000617647 RYR3Q15413 4870 aa3.23□□□□□ -1.89
PDE6A-205ENST00000617647 RYR2Q92736 4967 aa3.22□□□□□ -1.89
PDE6A-205ENST00000617647 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
PDE6A-205ENST00000617647 KRTAP9-3Q9BYQ3 159 aa3.22□□□□□ -1.89
PDE6A-205ENST00000617647 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
PDE6A-205ENST00000617647 SPRR5A0A1B0GTR4 108 aa3.17□□□□□ -1.9
PDE6A-205ENST00000617647 BIRC6Q9NR09 4857 aa3.17□□□□□ -1.9
PDE6A-205ENST00000617647 MYCBP2O75592 4640 aa3.15□□□□□ -1.91
PDE6A-205ENST00000617647 KMT2CQ8NEZ4 4911 aaKnown RBP3.13□□□□□ -1.91
PDE6A-205ENST00000617647 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
PDE6A-205ENST00000617647 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
PDE6A-205ENST00000617647 LPAP08519 4548 aa3.12□□□□□ -1.91
PDE6A-205ENST00000617647 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
PDE6A-205ENST00000617647 MT1HL1P0DM35 61 aa3.1□□□□□ -1.91
PDE6A-205ENST00000617647 LCE3AQ5TA76 89 aa3.1□□□□□ -1.91
PDE6A-205ENST00000617647 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
PDE6A-205ENST00000617647 KRTAP4-8Q9BYQ9 185 aa3.08□□□□□ -1.92
PDE6A-205ENST00000617647 HERC2O95714 4834 aa3.05□□□□□ -1.92
PDE6A-205ENST00000617647 RYR1P21817 5038 aa3.05□□□□□ -1.92
PDE6A-205ENST00000617647 EPPK1P58107 5090 aaKnown RBP3.01□□□□□ -1.93
PDE6A-205ENST00000617647 MUC17Q685J3 4493 aa3.01□□□□□ -1.93
PDE6A-205ENST00000617647 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
PDE6A-205ENST00000617647 PCLOQ9Y6V0 5065 aa2.98□□□□□ -1.93
PDE6A-205ENST00000617647 KRTAP10-10P60014 251 aa2.97□□□□□ -1.93
PDE6A-205ENST00000617647 LRP2P98164 4655 aa2.96□□□□□ -1.93
PDE6A-205ENST00000617647 ABCA13Q86UQ4 5058 aa2.96□□□□□ -1.94
PDE6A-205ENST00000617647 UBR4Q5T4S7 5183 aa2.95□□□□□ -1.94
PDE6A-205ENST00000617647 KIAA1109Q2LD37 5005 aa2.95□□□□□ -1.94
PDE6A-205ENST00000617647 KRTAP4-5Q9BYR2 181 aa2.93□□□□□ -1.94
PDE6A-205ENST00000617647 FLGP20930 4061 aaPredicted RBP2.91□□□□□ -1.94
PDE6A-205ENST00000617647 KRTAP10-12P60413 245 aa2.9□□□□□ -1.94
PDE6A-205ENST00000617647 LCE1AQ5T7P2 110 aa2.9□□□□□ -1.95
PDE6A-205ENST00000617647 KRTAP19-2Q3LHN2 52 aa2.87□□□□□ -1.95
PDE6A-205ENST00000617647 KRTAP4-1Q9BYQ7 146 aa2.87□□□□□ -1.95
PDE6A-205ENST00000617647 KRTAP8-1Q8IUC2 63 aa2.85□□□□□ -1.95
PDE6A-205ENST00000617647 LCE3BQ5TA77 95 aa2.84□□□□□ -1.95
PDE6A-205ENST00000617647 LCE1FQ5T754 118 aa2.84□□□□□ -1.96
PDE6A-205ENST00000617647 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
PDE6A-205ENST00000617647 HERC1Q15751 4861 aa2.77□□□□□ -1.97
PDE6A-205ENST00000617647 LCE3CQ5T5A8 94 aa2.73□□□□□ -1.97
PDE6A-205ENST00000617647 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
PDE6A-205ENST00000617647 KRTAP10-5P60370 271 aa2.71□□□□□ -1.98
PDE6A-205ENST00000617647 KRTAP4-8A0A0G2JLE6 195 aa2.7□□□□□ -1.98
PDE6A-205ENST00000617647 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
PDE6A-205ENST00000617647 MUC2Q02817 5179 aa2.68□□□□□ -1.98
PDE6A-205ENST00000617647 KRTAP19-5Q3LI72 72 aa2.65□□□□□ -1.98
PDE6A-205ENST00000617647 KRTAP12-4P60329 112 aa2.64□□□□□ -1.99
PDE6A-205ENST00000617647 HMCN2Q8NDA2 5059 aa2.63□□□□□ -1.99
PDE6A-205ENST00000617647 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
PDE6A-205ENST00000617647 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
PDE6A-205ENST00000617647 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
PDE6A-205ENST00000617647 MT1HP80294 61 aa2.61□□□□□ -1.99
PDE6A-205ENST00000617647 KRTAP2-2Q9BYT5 123 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms