RNA–Protein interactions for RNA: ENST00000617585.1

ARHGEF1-223, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-223ENST00000617585 A0A087WVE0 104 aa9.98□□□□□ -0.81
ARHGEF1-223ENST00000617585 HIST1H4AP62805 103 aaKnown RBP9.97□□□□□ -0.81
ARHGEF1-223ENST00000617585 ATOX1O00244 68 aa9.96□□□□□ -0.82
ARHGEF1-223ENST00000617585 A6NN06 94 aa9.92□□□□□ -0.82
ARHGEF1-223ENST00000617585 H0Y9P7 68 aa9.92□□□□□ -0.82
ARHGEF1-223ENST00000617585 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
ARHGEF1-223ENST00000617585 LINC00643Q86TS7 51 aa9.9□□□□□ -0.82
ARHGEF1-223ENST00000617585 IMUPQ9GZP8 106 aa9.87□□□□□ -0.83
ARHGEF1-223ENST00000617585 H0YAA0 97 aa9.85□□□□□ -0.83
ARHGEF1-223ENST00000617585 KRTAP10-5P60370 271 aa9.85□□□□□ -0.83
ARHGEF1-223ENST00000617585 A8MUN3 132 aa9.83□□□□□ -0.84
ARHGEF1-223ENST00000617585 NDUFC1O43677 76 aa9.82□□□□□ -0.84
ARHGEF1-223ENST00000617585 OCR1Q9BZK8 76 aa9.77□□□□□ -0.85
ARHGEF1-223ENST00000617585 LINC00208Q96KT6 92 aa9.76□□□□□ -0.85
ARHGEF1-223ENST00000617585 MP68P56378 58 aa9.7□□□□□ -0.86
ARHGEF1-223ENST00000617585 A0A1B0GV90 55 aa9.69□□□□□ -0.86
ARHGEF1-223ENST00000617585 MUC12Q9UKN1 5478 aa9.64□□□□□ -0.87
ARHGEF1-223ENST00000617585 ADM2Q7Z4H4 148 aa9.63□□□□□ -0.87
ARHGEF1-223ENST00000617585 H3BPC8 53 aa9.62□□□□□ -0.87
ARHGEF1-223ENST00000617585 NEBP20929 6669 aa9.61□□□□□ -0.87
ARHGEF1-223ENST00000617585 J3QR89 54 aa9.56□□□□□ -0.88
ARHGEF1-223ENST00000617585 KRTAP5-9P26371 169 aa9.56□□□□□ -0.88
ARHGEF1-223ENST00000617585 DMAC1Q96GE9 116 aa9.51□□□□□ -0.89
ARHGEF1-223ENST00000617585 SCGB1A1P11684 91 aa9.44□□□□□ -0.9
ARHGEF1-223ENST00000617585 KMT2DO14686 5537 aa9.43□□□□□ -0.9
ARHGEF1-223ENST00000617585 P0C880 135 aa9.43□□□□□ -0.9
ARHGEF1-223ENST00000617585 C20orf197Q8N268 126 aa9.42□□□□□ -0.9
ARHGEF1-223ENST00000617585 MT1XP80297 61 aa9.41□□□□□ -0.9
ARHGEF1-223ENST00000617585 PRO2289Q9P1D8 64 aa9.41□□□□□ -0.9
ARHGEF1-223ENST00000617585 R4GN34 69 aa9.4□□□□□ -0.9
ARHGEF1-223ENST00000617585 PLAC4Q8WY50 150 aa9.38□□□□□ -0.91
ARHGEF1-223ENST00000617585 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
ARHGEF1-223ENST00000617585 MDN1Q9NU22 5596 aa9.37□□□□□ -0.91
ARHGEF1-223ENST00000617585 TRAV7A0A075B6U4 112 aa9.32□□□□□ -0.92
ARHGEF1-223ENST00000617585 M0QZ58 72 aa9.3□□□□□ -0.92
ARHGEF1-223ENST00000617585 ACYP2P14621 99 aa9.25□□□□□ -0.93
ARHGEF1-223ENST00000617585 KRTAP12-2P59991 146 aa9.24□□□□□ -0.93
ARHGEF1-223ENST00000617585 KRTAP20-1Q3LI63 56 aa9.24□□□□□ -0.93
ARHGEF1-223ENST00000617585 SMIM20Q8N5G0 67 aa9.24□□□□□ -0.93
ARHGEF1-223ENST00000617585 MT-ATP8P03928 68 aa9.22□□□□□ -0.93
ARHGEF1-223ENST00000617585 K7ERU9 68 aa9.16□□□□□ -0.94
ARHGEF1-223ENST00000617585 SPRR2FQ96RM1 72 aa9.16□□□□□ -0.94
ARHGEF1-223ENST00000617585 SPTSSBQ8NFR3 76 aa9.14□□□□□ -0.95
ARHGEF1-223ENST00000617585 LINC01554Q52M75 96 aa9.12□□□□□ -0.95
ARHGEF1-223ENST00000617585 KRTAP8-1Q8IUC2 63 aa9.11□□□□□ -0.95
ARHGEF1-223ENST00000617585 KRTAP2-3P0C7H8 128 aa9.03□□□□□ -0.96
ARHGEF1-223ENST00000617585 SPRR2EP22531 72 aa9.03□□□□□ -0.96
ARHGEF1-223ENST00000617585 SPRR2BP35325 72 aa9.03□□□□□ -0.96
ARHGEF1-223ENST00000617585 SPRR2AP35326 72 aa9.03□□□□□ -0.96
ARHGEF1-223ENST00000617585 KRTAP2-4Q9BYR9 128 aa9.03□□□□□ -0.96
ARHGEF1-223ENST00000617585 CHKB-CPT1BH3BT56 60 aa9□□□□□ -0.97
ARHGEF1-223ENST00000617585 KRTAP4-8A0A0G2JLE6 195 aa8.99□□□□□ -0.97
ARHGEF1-223ENST00000617585 SPANXA2-OT1Q8N9U9 137 aa8.99□□□□□ -0.97
ARHGEF1-223ENST00000617585 KRTAP4-8Q9BYQ9 185 aa8.99□□□□□ -0.97
ARHGEF1-223ENST00000617585 SNURFQ9Y675 71 aa8.99□□□□□ -0.97
ARHGEF1-223ENST00000617585 KRTAP10-12P60413 245 aa8.97□□□□□ -0.97
ARHGEF1-223ENST00000617585 LCE1AQ5T7P2 110 aa8.97□□□□□ -0.97
ARHGEF1-223ENST00000617585 KRTAP10-7P60409 375 aaPredicted RBP8.95□□□□□ -0.98
ARHGEF1-223ENST00000617585 SERP2Q8N6R1 65 aa8.88□□□□□ -0.99
ARHGEF1-223ENST00000617585 KRTAP13-4Q3LI77 160 aa8.79□□□□□ -1
ARHGEF1-223ENST00000617585 KRTAP2-2Q9BYT5 123 aa8.74□□□□□ -1.01
ARHGEF1-223ENST00000617585 KRTAP2-1Q9BYU5 128 aa8.74□□□□□ -1.01
ARHGEF1-223ENST00000617585 SPRR2DP22532 72 aa8.73□□□□□ -1.01
ARHGEF1-223ENST00000617585 COA5Q86WW8 74 aa8.68□□□□□ -1.02
ARHGEF1-223ENST00000617585 CAMK2N1Q7Z7J9 78 aa8.6□□□□□ -1.03
ARHGEF1-223ENST00000617585 COX7CP15954 63 aa8.58□□□□□ -1.04
ARHGEF1-223ENST00000617585 SEC61GP60059 68 aa8.54□□□□□ -1.04
ARHGEF1-223ENST00000617585 SERP1Q9Y6X1 66 aa8.53□□□□□ -1.04
ARHGEF1-223ENST00000617585 LCE3BQ5TA77 95 aa8.52□□□□□ -1.05
ARHGEF1-223ENST00000617585 H7BZZ5 65 aa8.49□□□□□ -1.05
ARHGEF1-223ENST00000617585 CYSTM1Q9H1C7 97 aa8.45□□□□□ -1.06
ARHGEF1-223ENST00000617585 A0A1B0GU33 70 aa8.43□□□□□ -1.06
ARHGEF1-223ENST00000617585 KRTAP19-7Q3SYF9 63 aa8.43□□□□□ -1.06
ARHGEF1-223ENST00000617585 SPATA8Q6RVD6 105 aa8.43□□□□□ -1.06
ARHGEF1-223ENST00000617585 A0A0D9SG42 100 aa8.42□□□□□ -1.06
ARHGEF1-223ENST00000617585 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
ARHGEF1-223ENST00000617585 LCE5AQ5TCM9 118 aa8.35□□□□□ -1.07
ARHGEF1-223ENST00000617585 MT1EP04732 61 aa8.34□□□□□ -1.07
ARHGEF1-223ENST00000617585 SPINT4Q6UDR6 99 aa8.33□□□□□ -1.08
ARHGEF1-223ENST00000617585 KRTAP19-3Q7Z4W3 81 aa8.29□□□□□ -1.08
ARHGEF1-223ENST00000617585 DSTQ03001 7570 aaKnown RBP8.26□□□□□ -1.09
ARHGEF1-223ENST00000617585 A0A1B0GU69 56 aa8.22□□□□□ -1.09
ARHGEF1-223ENST00000617585 SMIM26A0A096LP01 95 aa8.19□□□□□ -1.1
ARHGEF1-223ENST00000617585 ANAPC13Q9BS18 74 aa8.16□□□□□ -1.1
ARHGEF1-223ENST00000617585 KRTAP19-5Q3LI72 72 aa8.15□□□□□ -1.1
ARHGEF1-223ENST00000617585 MT1GP13640 62 aa8.11□□□□□ -1.11
ARHGEF1-223ENST00000617585 A8MU10 97 aa8.1□□□□□ -1.11
ARHGEF1-223ENST00000617585 CCDC179H3BU77 68 aa8.03□□□□□ -1.12
ARHGEF1-223ENST00000617585 ATP5EP56381 51 aaPredicted RBP8.01□□□□□ -1.13
ARHGEF1-223ENST00000617585 PP632Q6XCG6 107 aa8□□□□□ -1.13
ARHGEF1-223ENST00000617585 C10orf95Q9H7T3 257 aa7.99□□□□□ -1.13
ARHGEF1-223ENST00000617585 TNP1P09430 55 aa7.96□□□□□ -1.14
ARHGEF1-223ENST00000617585 MT1LQ93083 61 aa7.96□□□□□ -1.14
ARHGEF1-223ENST00000617585 PRR15LQ9BU68 103 aa7.96□□□□□ -1.14
ARHGEF1-223ENST00000617585 MT1MQ8N339 61 aa7.94□□□□□ -1.14
ARHGEF1-223ENST00000617585 LCE3AQ5TA76 89 aa7.93□□□□□ -1.14
ARHGEF1-223ENST00000617585 LINC01558Q9Y6Z2 57 aa7.92□□□□□ -1.14
ARHGEF1-223ENST00000617585 KRTAP4-9Q9BYQ8 210 aa7.91□□□□□ -1.14
ARHGEF1-223ENST00000617585 LCE4AQ5TA78 99 aa7.78□□□□□ -1.16
ARHGEF1-223ENST00000617585 GPR98Q8WXG9 6306 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms