RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 ACYP2P14621 99 aa8.58□□□□□ -1.04
SEMA3B-212ENST00000616701 TNXBP22105 4242 aa8.58□□□□□ -1.04
SEMA3B-212ENST00000616701 EPPK1P58107 5090 aaKnown RBP8.56□□□□□ -1.04
SEMA3B-212ENST00000616701 NDUFAF8A1L188 74 aa8.56□□□□□ -1.04
SEMA3B-212ENST00000616701 DMBT1Q9UGM3 2413 aaPredicted RBP8.55□□□□□ -1.04
SEMA3B-212ENST00000616701 MYCBP2O75592 4640 aa8.51□□□□□ -1.05
SEMA3B-212ENST00000616701 FAT3Q8TDW7 4589 aa8.5□□□□□ -1.05
SEMA3B-212ENST00000616701 KRTAP10-8P60410 259 aa8.49□□□□□ -1.05
SEMA3B-212ENST00000616701 SPINT4Q6UDR6 99 aa8.46□□□□□ -1.05
SEMA3B-212ENST00000616701 DMAC1Q96GE9 116 aa8.46□□□□□ -1.05
SEMA3B-212ENST00000616701 C20orf166-AS1Q96NR2 134 aa8.4□□□□□ -1.06
SEMA3B-212ENST00000616701 MT1HL1P0DM35 61 aa8.34□□□□□ -1.07
SEMA3B-212ENST00000616701 KRTAP4-5Q9BYR2 181 aa8.33□□□□□ -1.08
SEMA3B-212ENST00000616701 H0YAA0 97 aa8.22□□□□□ -1.09
SEMA3B-212ENST00000616701 XP32Q5T750 250 aa8.22□□□□□ -1.09
SEMA3B-212ENST00000616701 LUZP6Q538Z0 58 aa8.2□□□□□ -1.1
SEMA3B-212ENST00000616701 KRTAP3-1Q9BYR8 98 aa8.18□□□□□ -1.1
SEMA3B-212ENST00000616701 RPL37P61927 97 aaKnown RBP8.17□□□□□ -1.1
SEMA3B-212ENST00000616701 ABCA13Q86UQ4 5058 aa8.17□□□□□ -1.1
SEMA3B-212ENST00000616701 LPAP08519 4548 aa8.14□□□□□ -1.11
SEMA3B-212ENST00000616701 LRP2P98164 4655 aa8.1□□□□□ -1.11
SEMA3B-212ENST00000616701 KRTAP15-1Q3LI76 137 aa8.08□□□□□ -1.12
SEMA3B-212ENST00000616701 SEC61BP60468 96 aaKnown RBP8.07□□□□□ -1.12
SEMA3B-212ENST00000616701 C10orf95Q9H7T3 257 aa8.06□□□□□ -1.12
SEMA3B-212ENST00000616701 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
SEMA3B-212ENST00000616701 HERC2O95714 4834 aa8.03□□□□□ -1.12
SEMA3B-212ENST00000616701 TPRXLQ17RH7 258 aa8.03□□□□□ -1.12
SEMA3B-212ENST00000616701 A0A1B0GU33 70 aa8.02□□□□□ -1.13
SEMA3B-212ENST00000616701 K7ERS5 55 aa8.02□□□□□ -1.13
SEMA3B-212ENST00000616701 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.14
SEMA3B-212ENST00000616701 H1FX-AS1Q4G0G2 97 aa7.89□□□□□ -1.15
SEMA3B-212ENST00000616701 KRTAP3-3Q9BYR6 98 aa7.84□□□□□ -1.15
SEMA3B-212ENST00000616701 S4R3F8 94 aa7.83□□□□□ -1.16
SEMA3B-212ENST00000616701 A0A0D9SG42 100 aa7.8□□□□□ -1.16
SEMA3B-212ENST00000616701 KRTAP4-1Q9BYQ7 146 aa7.72□□□□□ -1.17
SEMA3B-212ENST00000616701 PCLOQ9Y6V0 5065 aa7.72□□□□□ -1.17
SEMA3B-212ENST00000616701 HERC1Q15751 4861 aa7.71□□□□□ -1.18
SEMA3B-212ENST00000616701 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
SEMA3B-212ENST00000616701 KRTAP10-6P60371 365 aaPredicted RBP7.66□□□□□ -1.18
SEMA3B-212ENST00000616701 KRTAP3-2Q9BYR7 98 aa7.64□□□□□ -1.19
SEMA3B-212ENST00000616701 MUC2Q02817 5179 aa7.63□□□□□ -1.19
SEMA3B-212ENST00000616701 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
SEMA3B-212ENST00000616701 HMCN2Q8NDA2 5059 aa7.53□□□□□ -1.2
SEMA3B-212ENST00000616701 KRTAP19-2Q3LHN2 52 aa7.44□□□□□ -1.22
SEMA3B-212ENST00000616701 PLAC4Q8WY50 150 aa7.35□□□□□ -1.23
SEMA3B-212ENST00000616701 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
SEMA3B-212ENST00000616701 LORP23490 312 aaPredicted RBP7.32□□□□□ -1.24
SEMA3B-212ENST00000616701 FLGP20930 4061 aaPredicted RBP7.31□□□□□ -1.24
SEMA3B-212ENST00000616701 M0QZ58 72 aa7.29□□□□□ -1.24
SEMA3B-212ENST00000616701 UBR4Q5T4S7 5183 aa7.28□□□□□ -1.24
SEMA3B-212ENST00000616701 FAT4Q6V0I7 4981 aa7.28□□□□□ -1.24
SEMA3B-212ENST00000616701 RNF213Q63HN8 5207 aa7.27□□□□□ -1.25
SEMA3B-212ENST00000616701 R4GN34 69 aa7.26□□□□□ -1.25
SEMA3B-212ENST00000616701 KRTAP12-1P59990 96 aa7.23□□□□□ -1.25
SEMA3B-212ENST00000616701 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
SEMA3B-212ENST00000616701 CAMK2N1Q7Z7J9 78 aa7.1□□□□□ -1.27
SEMA3B-212ENST00000616701 M0R2T5 61 aa7.07□□□□□ -1.28
SEMA3B-212ENST00000616701 MT1HP80294 61 aa7.02□□□□□ -1.29
SEMA3B-212ENST00000616701 PRO2289Q9P1D8 64 aa6.88□□□□□ -1.31
SEMA3B-212ENST00000616701 MT1FP04733 61 aa6.82□□□□□ -1.32
SEMA3B-212ENST00000616701 KRTAP10-10P60014 251 aa6.82□□□□□ -1.32
SEMA3B-212ENST00000616701 MT2AP02795 61 aa6.82□□□□□ -1.32
SEMA3B-212ENST00000616701 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
SEMA3B-212ENST00000616701 KRTAP9-8Q9BYQ0 159 aa6.79□□□□□ -1.32
SEMA3B-212ENST00000616701 KRTAP19-1Q8IUB9 90 aa6.78□□□□□ -1.32
SEMA3B-212ENST00000616701 SPRR2GQ9BYE4 73 aa6.74□□□□□ -1.33
SEMA3B-212ENST00000616701 PP632Q6XCG6 107 aa6.58□□□□□ -1.36
SEMA3B-212ENST00000616701 KRTAP9-3Q9BYQ3 159 aa6.51□□□□□ -1.37
SEMA3B-212ENST00000616701 TNP1P09430 55 aa6.5□□□□□ -1.37
SEMA3B-212ENST00000616701 MT1BP07438 61 aa6.49□□□□□ -1.37
SEMA3B-212ENST00000616701 KRTAP19-8Q3LI54 63 aa6.49□□□□□ -1.37
SEMA3B-212ENST00000616701 INE1O15225 51 aa6.45□□□□□ -1.38
SEMA3B-212ENST00000616701 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
SEMA3B-212ENST00000616701 SPRR5A0A1B0GTR4 108 aa6.38□□□□□ -1.39
SEMA3B-212ENST00000616701 MT1XP80297 61 aa6.36□□□□□ -1.39
SEMA3B-212ENST00000616701 USH2AO75445 5202 aa6.35□□□□□ -1.39
SEMA3B-212ENST00000616701 LCE2BO14633 110 aa6.35□□□□□ -1.39
SEMA3B-212ENST00000616701 KRTAP10-5P60370 271 aa6.35□□□□□ -1.39
SEMA3B-212ENST00000616701 LCE3AQ5TA76 89 aa6.27□□□□□ -1.41
SEMA3B-212ENST00000616701 KRTAP10-7P60409 375 aaPredicted RBP6.2□□□□□ -1.42
SEMA3B-212ENST00000616701 KRTAP10-12P60413 245 aa6.12□□□□□ -1.43
SEMA3B-212ENST00000616701 KMT2DO14686 5537 aa6.08□□□□□ -1.44
SEMA3B-212ENST00000616701 FSIP2Q5CZC0 6907 aa6.03□□□□□ -1.44
SEMA3B-212ENST00000616701 KRTAP8-1Q8IUC2 63 aa6.01□□□□□ -1.45
SEMA3B-212ENST00000616701 SSPOA2VEC9 5147 aa5.95□□□□□ -1.46
SEMA3B-212ENST00000616701 KRTAP12-3P60328 96 aa5.95□□□□□ -1.46
SEMA3B-212ENST00000616701 KRTAP4-8A0A0G2JLE6 195 aa5.94□□□□□ -1.46
SEMA3B-212ENST00000616701 KRTAP4-8Q9BYQ9 185 aa5.94□□□□□ -1.46
SEMA3B-212ENST00000616701 KRTAP19-5Q3LI72 72 aa5.86□□□□□ -1.47
SEMA3B-212ENST00000616701 LCE2DQ5TA82 110 aaPredicted RBP5.8□□□□□ -1.48
SEMA3B-212ENST00000616701 KRTAP19-6Q3LI70 58 aa5.74□□□□□ -1.49
SEMA3B-212ENST00000616701 KRTAP19-7Q3SYF9 63 aa5.67□□□□□ -1.5
SEMA3B-212ENST00000616701 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
SEMA3B-212ENST00000616701 LCE3CQ5T5A8 94 aa5.56□□□□□ -1.52
SEMA3B-212ENST00000616701 KRTAP4-7Q9BYR0 210 aa5.54□□□□□ -1.52
SEMA3B-212ENST00000616701 MT1EP04732 61 aa5.52□□□□□ -1.53
SEMA3B-212ENST00000616701 MT1LQ93083 61 aa5.47□□□□□ -1.53
SEMA3B-212ENST00000616701 MUC12Q9UKN1 5478 aa5.46□□□□□ -1.54
SEMA3B-212ENST00000616701 KRTAP9-2Q9BYQ4 174 aa5.41□□□□□ -1.54
SEMA3B-212ENST00000616701 KRTAP9-6A8MVA2 160 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms