RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 PKHD1L1Q86WI1 4243 aa7.5□□□□□ -1.21
CACNA1C-231ENST00000616390 Q5VSD8 79 aa7.41□□□□□ -1.22
CACNA1C-231ENST00000616390 KRTAP3-1Q9BYR8 98 aa7.41□□□□□ -1.22
CACNA1C-231ENST00000616390 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.23
CACNA1C-231ENST00000616390 SPINT4Q6UDR6 99 aa7.4□□□□□ -1.23
CACNA1C-231ENST00000616390 RYR3Q15413 4870 aa7.37□□□□□ -1.23
CACNA1C-231ENST00000616390 MYCBP2O75592 4640 aa7.37□□□□□ -1.23
CACNA1C-231ENST00000616390 TNXBP22105 4242 aa7.36□□□□□ -1.23
CACNA1C-231ENST00000616390 HSPG2P98160 4391 aa7.36□□□□□ -1.23
CACNA1C-231ENST00000616390 FAT3Q8TDW7 4589 aa7.35□□□□□ -1.23
CACNA1C-231ENST00000616390 KRTAP17-1Q9BYP8 105 aa7.32□□□□□ -1.24
CACNA1C-231ENST00000616390 KRTAP10-8P60410 259 aa7.31□□□□□ -1.24
CACNA1C-231ENST00000616390 KIAA1109Q2LD37 5005 aa7.28□□□□□ -1.24
CACNA1C-231ENST00000616390 COX6B2Q6YFQ2 88 aa7.26□□□□□ -1.25
CACNA1C-231ENST00000616390 RYR1P21817 5038 aa7.25□□□□□ -1.25
CACNA1C-231ENST00000616390 CRIPTQ9P021 101 aa7.22□□□□□ -1.25
CACNA1C-231ENST00000616390 A0A1B0GU33 70 aa7.21□□□□□ -1.25
CACNA1C-231ENST00000616390 H0YAA0 97 aa7.21□□□□□ -1.25
CACNA1C-231ENST00000616390 XP32Q5T750 250 aa7.21□□□□□ -1.25
CACNA1C-231ENST00000616390 RPL37P61927 97 aaKnown RBP7.19□□□□□ -1.26
CACNA1C-231ENST00000616390 H1FX-AS1Q4G0G2 97 aa7.15□□□□□ -1.26
CACNA1C-231ENST00000616390 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
CACNA1C-231ENST00000616390 LPAP08519 4548 aa7.13□□□□□ -1.27
CACNA1C-231ENST00000616390 MT1HL1P0DM35 61 aa7.13□□□□□ -1.27
CACNA1C-231ENST00000616390 LRP2P98164 4655 aa7.09□□□□□ -1.27
CACNA1C-231ENST00000616390 KRTAP3-3Q9BYR6 98 aa7.08□□□□□ -1.28
CACNA1C-231ENST00000616390 CAMK2N1Q7Z7J9 78 aa7.07□□□□□ -1.28
CACNA1C-231ENST00000616390 S4R3F8 94 aa7.06□□□□□ -1.28
CACNA1C-231ENST00000616390 ABCA13Q86UQ4 5058 aa7.03□□□□□ -1.28
CACNA1C-231ENST00000616390 A0A0D9SG42 100 aa7.02□□□□□ -1.29
CACNA1C-231ENST00000616390 KRTAP4-5Q9BYR2 181 aa7□□□□□ -1.29
CACNA1C-231ENST00000616390 KRTAP10-6P60371 365 aaPredicted RBP6.99□□□□□ -1.29
CACNA1C-231ENST00000616390 TPRXLQ17RH7 258 aa6.97□□□□□ -1.29
CACNA1C-231ENST00000616390 KRTAP13-4Q3LI77 160 aa6.96□□□□□ -1.29
CACNA1C-231ENST00000616390 KRTAP3-2Q9BYR7 98 aa6.94□□□□□ -1.3
CACNA1C-231ENST00000616390 C10orf95Q9H7T3 257 aa6.76□□□□□ -1.33
CACNA1C-231ENST00000616390 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
CACNA1C-231ENST00000616390 HERC2O95714 4834 aa6.7□□□□□ -1.34
CACNA1C-231ENST00000616390 KRTAP4-1Q9BYQ7 146 aa6.68□□□□□ -1.34
CACNA1C-231ENST00000616390 MUC2Q02817 5179 aa6.66□□□□□ -1.34
CACNA1C-231ENST00000616390 MUC17Q685J3 4493 aa6.65□□□□□ -1.34
CACNA1C-231ENST00000616390 KRTAP12-1P59990 96 aa6.64□□□□□ -1.35
CACNA1C-231ENST00000616390 M0QZ58 72 aa6.63□□□□□ -1.35
CACNA1C-231ENST00000616390 PRO2289Q9P1D8 64 aa6.6□□□□□ -1.35
CACNA1C-231ENST00000616390 R4GN34 69 aa6.59□□□□□ -1.35
CACNA1C-231ENST00000616390 LORP23490 312 aaPredicted RBP6.56□□□□□ -1.36
CACNA1C-231ENST00000616390 KRTAP23-1A1A580 65 aa6.54□□□□□ -1.36
CACNA1C-231ENST00000616390 BIRC6Q9NR09 4857 aa6.49□□□□□ -1.37
CACNA1C-231ENST00000616390 PLAC4Q8WY50 150 aa6.48□□□□□ -1.37
CACNA1C-231ENST00000616390 HERC1Q15751 4861 aa6.47□□□□□ -1.37
CACNA1C-231ENST00000616390 KRTAP19-2Q3LHN2 52 aa6.42□□□□□ -1.38
CACNA1C-231ENST00000616390 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
CACNA1C-231ENST00000616390 FLGP20930 4061 aaPredicted RBP6.33□□□□□ -1.4
CACNA1C-231ENST00000616390 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
CACNA1C-231ENST00000616390 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
CACNA1C-231ENST00000616390 RNF213Q63HN8 5207 aa6.23□□□□□ -1.41
CACNA1C-231ENST00000616390 M0R2T5 61 aa6.16□□□□□ -1.42
CACNA1C-231ENST00000616390 INE1O15225 51 aa6.15□□□□□ -1.43
CACNA1C-231ENST00000616390 UBR4Q5T4S7 5183 aa6.13□□□□□ -1.43
CACNA1C-231ENST00000616390 LCE2CQ5TA81 110 aa6.11□□□□□ -1.43
CACNA1C-231ENST00000616390 MT1HP80294 61 aa5.98□□□□□ -1.45
CACNA1C-231ENST00000616390 TNP1P09430 55 aa5.95□□□□□ -1.46
CACNA1C-231ENST00000616390 KRTAP10-10P60014 251 aa5.94□□□□□ -1.46
CACNA1C-231ENST00000616390 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
CACNA1C-231ENST00000616390 PP632Q6XCG6 107 aa5.91□□□□□ -1.46
CACNA1C-231ENST00000616390 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.47
CACNA1C-231ENST00000616390 MT1FP04733 61 aa5.89□□□□□ -1.47
CACNA1C-231ENST00000616390 MT2AP02795 61 aa5.87□□□□□ -1.47
CACNA1C-231ENST00000616390 KRTAP9-8Q9BYQ0 159 aa5.81□□□□□ -1.48
CACNA1C-231ENST00000616390 SPRR5A0A1B0GTR4 108 aa5.81□□□□□ -1.48
CACNA1C-231ENST00000616390 LCE3AQ5TA76 89 aa5.69□□□□□ -1.5
CACNA1C-231ENST00000616390 MT1BP07438 61 aa5.63□□□□□ -1.51
CACNA1C-231ENST00000616390 KRTAP19-8Q3LI54 63 aa5.62□□□□□ -1.51
CACNA1C-231ENST00000616390 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
CACNA1C-231ENST00000616390 MT1XP80297 61 aa5.57□□□□□ -1.52
CACNA1C-231ENST00000616390 KRTAP9-3Q9BYQ3 159 aa5.56□□□□□ -1.52
CACNA1C-231ENST00000616390 USH2AO75445 5202 aa5.52□□□□□ -1.53
CACNA1C-231ENST00000616390 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
CACNA1C-231ENST00000616390 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
CACNA1C-231ENST00000616390 KRTAP8-1Q8IUC2 63 aa5.42□□□□□ -1.54
CACNA1C-231ENST00000616390 LCE2BO14633 110 aa5.41□□□□□ -1.54
CACNA1C-231ENST00000616390 KMT2DO14686 5537 aa5.41□□□□□ -1.54
CACNA1C-231ENST00000616390 KRTAP12-3P60328 96 aa5.39□□□□□ -1.55
CACNA1C-231ENST00000616390 LCE2AQ5TA79 106 aaPredicted RBP5.29□□□□□ -1.56
CACNA1C-231ENST00000616390 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
CACNA1C-231ENST00000616390 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
CACNA1C-231ENST00000616390 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
CACNA1C-231ENST00000616390 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
CACNA1C-231ENST00000616390 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
CACNA1C-231ENST00000616390 SSPOA2VEC9 5147 aa5.01□□□□□ -1.61
CACNA1C-231ENST00000616390 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
CACNA1C-231ENST00000616390 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.61
CACNA1C-231ENST00000616390 KRTAP9-6A8MVA2 160 aa4.9□□□□□ -1.63
CACNA1C-231ENST00000616390 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
CACNA1C-231ENST00000616390 MT1EP04732 61 aa4.82□□□□□ -1.64
CACNA1C-231ENST00000616390 MT1LQ93083 61 aa4.81□□□□□ -1.64
CACNA1C-231ENST00000616390 FCGBPQ9Y6R7 5405 aaPredicted RBP4.78□□□□□ -1.64
CACNA1C-231ENST00000616390 KRTAP19-6Q3LI70 58 aa4.78□□□□□ -1.64
CACNA1C-231ENST00000616390 MUC12Q9UKN1 5478 aa4.76□□□□□ -1.65
CACNA1C-231ENST00000616390 LCE2DQ5TA82 110 aaPredicted RBP4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms