RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CMYA5Q8N3K9 4069 aa6.33□□□□□ -1.4
PPP4R3B-205ENST00000616288 DNAH2Q9P225 4427 aa6.29□□□□□ -1.4
PPP4R3B-205ENST00000616288 DNAH7Q8WXX0 4024 aa6.29□□□□□ -1.4
PPP4R3B-205ENST00000616288 M0R2T5 61 aa6.29□□□□□ -1.4
PPP4R3B-205ENST00000616288 LRP1BQ9NZR2 4599 aa6.28□□□□□ -1.4
PPP4R3B-205ENST00000616288 A0A1B0GVY2 172 aa6.21□□□□□ -1.41
PPP4R3B-205ENST00000616288 DNAH3Q8TD57 4116 aa6.2□□□□□ -1.42
PPP4R3B-205ENST00000616288 HECTD4Q9Y4D8 3996 aa6.18□□□□□ -1.42
PPP4R3B-205ENST00000616288 INE1O15225 51 aa6.17□□□□□ -1.42
PPP4R3B-205ENST00000616288 KMT2AQ03164 3969 aa6.17□□□□□ -1.42
PPP4R3B-205ENST00000616288 STARD9Q9P2P6 4700 aa6.15□□□□□ -1.43
PPP4R3B-205ENST00000616288 DNAH6Q9C0G6 4158 aa6.12□□□□□ -1.43
PPP4R3B-205ENST00000616288 VPS13DQ5THJ4 4388 aa6.12□□□□□ -1.43
PPP4R3B-205ENST00000616288 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
PPP4R3B-205ENST00000616288 VPS13BQ7Z7G8 4022 aa6.08□□□□□ -1.44
PPP4R3B-205ENST00000616288 MYCBP2O75592 4640 aa6□□□□□ -1.45
PPP4R3B-205ENST00000616288 FAT1Q14517 4588 aa5.97□□□□□ -1.45
PPP4R3B-205ENST00000616288 DNAH5Q8TE73 4624 aa5.95□□□□□ -1.46
PPP4R3B-205ENST00000616288 APOBP04114 4563 aaKnown RBP5.94□□□□□ -1.46
PPP4R3B-205ENST00000616288 KRTAP10-4P60372 401 aaPredicted RBP5.89□□□□□ -1.47
PPP4R3B-205ENST00000616288 DYNC1H1Q14204 4646 aaKnown RBP5.83□□□□□ -1.48
PPP4R3B-205ENST00000616288 DYNC2H1Q8NCM8 4307 aaKnown RBP5.8□□□□□ -1.48
PPP4R3B-205ENST00000616288 LRP1Q07954 4544 aaKnown RBP5.79□□□□□ -1.48
PPP4R3B-205ENST00000616288 SACSQ9NZJ4 4579 aa5.79□□□□□ -1.48
PPP4R3B-205ENST00000616288 PRKDCP78527 4128 aaKnown RBP5.78□□□□□ -1.48
PPP4R3B-205ENST00000616288 LCE3AQ5TA76 89 aa5.75□□□□□ -1.49
PPP4R3B-205ENST00000616288 KRTAP23-1A1A580 65 aa5.74□□□□□ -1.49
PPP4R3B-205ENST00000616288 KRTAP10-10P60014 251 aa5.72□□□□□ -1.49
PPP4R3B-205ENST00000616288 SPRR5A0A1B0GTR4 108 aa5.68□□□□□ -1.5
PPP4R3B-205ENST00000616288 HSPG2P98160 4391 aa5.67□□□□□ -1.5
PPP4R3B-205ENST00000616288 FAT2Q9NYQ8 4349 aa5.66□□□□□ -1.5
PPP4R3B-205ENST00000616288 MT1HL1P0DM35 61 aa5.66□□□□□ -1.5
PPP4R3B-205ENST00000616288 FAT3Q8TDW7 4589 aa5.61□□□□□ -1.51
PPP4R3B-205ENST00000616288 PKHD1P08F94 4074 aa5.61□□□□□ -1.51
PPP4R3B-205ENST00000616288 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
PPP4R3B-205ENST00000616288 HYDINQ4G0P3 5121 aa5.58□□□□□ -1.52
PPP4R3B-205ENST00000616288 LRP2P98164 4655 aa5.57□□□□□ -1.52
PPP4R3B-205ENST00000616288 KRTAP21-3Q3LHN1 58 aa5.53□□□□□ -1.52
PPP4R3B-205ENST00000616288 PKD1P98161 4303 aa5.51□□□□□ -1.53
PPP4R3B-205ENST00000616288 KRTAP10-12P60413 245 aa5.48□□□□□ -1.53
PPP4R3B-205ENST00000616288 DNHD1Q96M86 4753 aa5.41□□□□□ -1.54
PPP4R3B-205ENST00000616288 KRTAP4-1Q9BYQ7 146 aa5.4□□□□□ -1.54
PPP4R3B-205ENST00000616288 LPAP08519 4548 aa5.4□□□□□ -1.54
PPP4R3B-205ENST00000616288 PKHD1L1Q86WI1 4243 aa5.37□□□□□ -1.55
PPP4R3B-205ENST00000616288 KMT2CQ8NEZ4 4911 aaKnown RBP5.37□□□□□ -1.55
PPP4R3B-205ENST00000616288 RYR1P21817 5038 aa5.26□□□□□ -1.57
PPP4R3B-205ENST00000616288 KRTAP8-1Q8IUC2 63 aa5.25□□□□□ -1.57
PPP4R3B-205ENST00000616288 KRTAP4-5Q9BYR2 181 aa5.21□□□□□ -1.57
PPP4R3B-205ENST00000616288 KIAA1109Q2LD37 5005 aa5.17□□□□□ -1.58
PPP4R3B-205ENST00000616288 KRTAP17-1Q9BYP8 105 aa5.17□□□□□ -1.58
PPP4R3B-205ENST00000616288 TNXBP22105 4242 aa5.17□□□□□ -1.58
PPP4R3B-205ENST00000616288 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
PPP4R3B-205ENST00000616288 SPRR2GQ9BYE4 73 aa5.11□□□□□ -1.59
PPP4R3B-205ENST00000616288 KRTAP10-5P60370 271 aa5.09□□□□□ -1.6
PPP4R3B-205ENST00000616288 LCE3CQ5T5A8 94 aa5.05□□□□□ -1.6
PPP4R3B-205ENST00000616288 KRTAP19-1Q8IUB9 90 aa5.01□□□□□ -1.61
PPP4R3B-205ENST00000616288 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
PPP4R3B-205ENST00000616288 RYR3Q15413 4870 aa4.97□□□□□ -1.61
PPP4R3B-205ENST00000616288 KRTAP10-7P60409 375 aaPredicted RBP4.93□□□□□ -1.62
PPP4R3B-205ENST00000616288 KRTAP19-2Q3LHN2 52 aa4.93□□□□□ -1.62
PPP4R3B-205ENST00000616288 MT1FP04733 61 aa4.9□□□□□ -1.63
PPP4R3B-205ENST00000616288 MT2AP02795 61 aa4.89□□□□□ -1.63
PPP4R3B-205ENST00000616288 MUC2Q02817 5179 aa4.88□□□□□ -1.63
PPP4R3B-205ENST00000616288 MUC17Q685J3 4493 aa4.86□□□□□ -1.63
PPP4R3B-205ENST00000616288 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
PPP4R3B-205ENST00000616288 RYR2Q92736 4967 aa4.84□□□□□ -1.63
PPP4R3B-205ENST00000616288 KRTAP12-4P60329 112 aa4.84□□□□□ -1.64
PPP4R3B-205ENST00000616288 MT1XP80297 61 aa4.82□□□□□ -1.64
PPP4R3B-205ENST00000616288 FLGP20930 4061 aaPredicted RBP4.8□□□□□ -1.64
PPP4R3B-205ENST00000616288 EPPK1P58107 5090 aaKnown RBP4.78□□□□□ -1.64
PPP4R3B-205ENST00000616288 MT1HP80294 61 aa4.77□□□□□ -1.65
PPP4R3B-205ENST00000616288 SYNE1Q8NF91 8797 aaKnown RBP4.7□□□□□ -1.66
PPP4R3B-205ENST00000616288 KRTAP4-7Q9BYR0 210 aa4.69□□□□□ -1.66
PPP4R3B-205ENST00000616288 MT1BP07438 61 aa4.68□□□□□ -1.66
PPP4R3B-205ENST00000616288 KRTAP19-8Q3LI54 63 aa4.68□□□□□ -1.66
PPP4R3B-205ENST00000616288 FAT4Q6V0I7 4981 aa4.67□□□□□ -1.66
PPP4R3B-205ENST00000616288 HERC2O95714 4834 aa4.64□□□□□ -1.67
PPP4R3B-205ENST00000616288 HERC1Q15751 4861 aa4.63□□□□□ -1.67
PPP4R3B-205ENST00000616288 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
PPP4R3B-205ENST00000616288 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
PPP4R3B-205ENST00000616288 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
PPP4R3B-205ENST00000616288 LCE2CQ5TA81 110 aa4.58□□□□□ -1.68
PPP4R3B-205ENST00000616288 HMCN2Q8NDA2 5059 aa4.57□□□□□ -1.68
PPP4R3B-205ENST00000616288 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
PPP4R3B-205ENST00000616288 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
PPP4R3B-205ENST00000616288 KRTAP2-1Q9BYU5 128 aa4.55□□□□□ -1.68
PPP4R3B-205ENST00000616288 PCLOQ9Y6V0 5065 aa4.55□□□□□ -1.68
PPP4R3B-205ENST00000616288 UBR4Q5T4S7 5183 aa4.53□□□□□ -1.68
PPP4R3B-205ENST00000616288 KRTAP9-8Q9BYQ0 159 aa4.5□□□□□ -1.69
PPP4R3B-205ENST00000616288 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
PPP4R3B-205ENST00000616288 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
PPP4R3B-205ENST00000616288 MT1GP13640 62 aa4.47□□□□□ -1.69
PPP4R3B-205ENST00000616288 KMT2DO14686 5537 aa4.38□□□□□ -1.71
PPP4R3B-205ENST00000616288 RNF213Q63HN8 5207 aa4.35□□□□□ -1.71
PPP4R3B-205ENST00000616288 LOC100996750A0A140TA64 210 aa4.33□□□□□ -1.72
PPP4R3B-205ENST00000616288 PRM1P04553 51 aa4.32□□□□□ -1.72
PPP4R3B-205ENST00000616288 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
PPP4R3B-205ENST00000616288 MT1LQ93083 61 aa4.3□□□□□ -1.72
PPP4R3B-205ENST00000616288 KRTAP9-3Q9BYQ3 159 aa4.3□□□□□ -1.72
PPP4R3B-205ENST00000616288 BIRC6Q9NR09 4857 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms