RNA–Protein interactions for RNA: ENST00000615951.4

CDK11B-206, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best)

Gene CDK11B, Length 2,227 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-206ENST00000615951 Q8N1X5 172 aa10.19□□□□□ -0.78
CDK11B-206ENST00000615951 KIAA1109Q2LD37 5005 aa10.19□□□□□ -0.78
CDK11B-206ENST00000615951 C9orf92A6NGG3 77 aa10.18□□□□□ -0.78
CDK11B-206ENST00000615951 HSPG2P98160 4391 aa10.17□□□□□ -0.78
CDK11B-206ENST00000615951 NDUFAF8A1L188 74 aa10.17□□□□□ -0.78
CDK11B-206ENST00000615951 SPINT4Q6UDR6 99 aa10.14□□□□□ -0.79
CDK11B-206ENST00000615951 FLG2Q5D862 2391 aaPredicted RBP10.12□□□□□ -0.79
CDK11B-206ENST00000615951 RYR1P21817 5038 aa10.12□□□□□ -0.79
CDK11B-206ENST00000615951 KRTAP17-1Q9BYP8 105 aa10.07□□□□□ -0.8
CDK11B-206ENST00000615951 TNXBP22105 4242 aa10.07□□□□□ -0.8
CDK11B-206ENST00000615951 A0A1B0GU33 70 aa10.06□□□□□ -0.8
CDK11B-206ENST00000615951 KRTAP15-1Q3LI76 137 aa10.04□□□□□ -0.8
CDK11B-206ENST00000615951 K7ERS5 55 aa10.03□□□□□ -0.8
CDK11B-206ENST00000615951 FAT3Q8TDW7 4589 aa10.01□□□□□ -0.81
CDK11B-206ENST00000615951 H1FX-AS1Q4G0G2 97 aa9.99□□□□□ -0.81
CDK11B-206ENST00000615951 MT1HL1P0DM35 61 aa9.98□□□□□ -0.81
CDK11B-206ENST00000615951 LRP1Q07954 4544 aaKnown RBP9.98□□□□□ -0.81
CDK11B-206ENST00000615951 PCLOQ9Y6V0 5065 aa9.92□□□□□ -0.82
CDK11B-206ENST00000615951 ABCA13Q86UQ4 5058 aa9.91□□□□□ -0.82
CDK11B-206ENST00000615951 RPL37P61927 97 aaKnown RBP9.89□□□□□ -0.83
CDK11B-206ENST00000615951 TPRXLQ17RH7 258 aa9.89□□□□□ -0.83
CDK11B-206ENST00000615951 XP32Q5T750 250 aa9.85□□□□□ -0.83
CDK11B-206ENST00000615951 KRTAP4-5Q9BYR2 181 aa9.82□□□□□ -0.84
CDK11B-206ENST00000615951 KRTAP3-1Q9BYR8 98 aa9.81□□□□□ -0.84
CDK11B-206ENST00000615951 COX6B2Q6YFQ2 88 aa9.78□□□□□ -0.84
CDK11B-206ENST00000615951 DMBT1Q9UGM3 2413 aaPredicted RBP9.77□□□□□ -0.85
CDK11B-206ENST00000615951 LUZP6Q538Z0 58 aa9.72□□□□□ -0.85
CDK11B-206ENST00000615951 MYCBP2O75592 4640 aa9.68□□□□□ -0.86
CDK11B-206ENST00000615951 C10orf95Q9H7T3 257 aa9.67□□□□□ -0.86
CDK11B-206ENST00000615951 HERC1Q15751 4861 aa9.46□□□□□ -0.89
CDK11B-206ENST00000615951 J3QL48 77 aa9.44□□□□□ -0.9
CDK11B-206ENST00000615951 KRTAP3-3Q9BYR6 98 aa9.44□□□□□ -0.9
CDK11B-206ENST00000615951 S4R3F8 94 aa9.44□□□□□ -0.9
CDK11B-206ENST00000615951 A0A0D9SG42 100 aa9.4□□□□□ -0.91
CDK11B-206ENST00000615951 KRTAP13-4Q3LI77 160 aa9.37□□□□□ -0.91
CDK11B-206ENST00000615951 SEC61BP60468 96 aaKnown RBP9.36□□□□□ -0.91
CDK11B-206ENST00000615951 KRTAP10-6P60371 365 aaPredicted RBP9.33□□□□□ -0.92
CDK11B-206ENST00000615951 LRP2P98164 4655 aa9.31□□□□□ -0.92
CDK11B-206ENST00000615951 LPAP08519 4548 aa9.25□□□□□ -0.93
CDK11B-206ENST00000615951 KRTAP3-2Q9BYR7 98 aa9.22□□□□□ -0.93
CDK11B-206ENST00000615951 HMCN2Q8NDA2 5059 aa9.18□□□□□ -0.94
CDK11B-206ENST00000615951 KRTAP12-2P59991 146 aa9.18□□□□□ -0.94
CDK11B-206ENST00000615951 KRTAP4-1Q9BYQ7 146 aa9.11□□□□□ -0.95
CDK11B-206ENST00000615951 PLAC4Q8WY50 150 aa9.08□□□□□ -0.96
CDK11B-206ENST00000615951 MUC17Q685J3 4493 aa9.08□□□□□ -0.96
CDK11B-206ENST00000615951 KRTAP12-1P59990 96 aa9.04□□□□□ -0.96
CDK11B-206ENST00000615951 KRTAP19-2Q3LHN2 52 aa8.97□□□□□ -0.97
CDK11B-206ENST00000615951 M0QZ58 72 aa8.92□□□□□ -0.98
CDK11B-206ENST00000615951 UBR4Q5T4S7 5183 aa8.9□□□□□ -0.98
CDK11B-206ENST00000615951 CAMK2N1Q7Z7J9 78 aa8.74□□□□□ -1.01
CDK11B-206ENST00000615951 R4GN34 69 aa8.69□□□□□ -1.02
CDK11B-206ENST00000615951 RNF213Q63HN8 5207 aa8.65□□□□□ -1.03
CDK11B-206ENST00000615951 FLGP20930 4061 aaPredicted RBP8.64□□□□□ -1.03
CDK11B-206ENST00000615951 LORP23490 312 aaPredicted RBP8.61□□□□□ -1.03
CDK11B-206ENST00000615951 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
CDK11B-206ENST00000615951 PRO2289Q9P1D8 64 aa8.51□□□□□ -1.05
CDK11B-206ENST00000615951 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
CDK11B-206ENST00000615951 MUC2Q02817 5179 aa8.48□□□□□ -1.05
CDK11B-206ENST00000615951 MT1HP80294 61 aa8.36□□□□□ -1.07
CDK11B-206ENST00000615951 SPRR5A0A1B0GTR4 108 aa8.31□□□□□ -1.08
CDK11B-206ENST00000615951 M0R2T5 61 aa8.29□□□□□ -1.08
CDK11B-206ENST00000615951 FAT4Q6V0I7 4981 aa8.25□□□□□ -1.09
CDK11B-206ENST00000615951 SPRR2GQ9BYE4 73 aa8.22□□□□□ -1.09
CDK11B-206ENST00000615951 INE1O15225 51 aa8.17□□□□□ -1.1
CDK11B-206ENST00000615951 MT2AP02795 61 aa8.14□□□□□ -1.11
CDK11B-206ENST00000615951 KRTAP19-1Q8IUB9 90 aa8.13□□□□□ -1.11
CDK11B-206ENST00000615951 KRTAP9-8Q9BYQ0 159 aa8.13□□□□□ -1.11
CDK11B-206ENST00000615951 MT1FP04733 61 aa8.1□□□□□ -1.11
CDK11B-206ENST00000615951 LCE2AQ5TA79 106 aaPredicted RBP8.1□□□□□ -1.11
CDK11B-206ENST00000615951 KRTAP10-10P60014 251 aa8.07□□□□□ -1.12
CDK11B-206ENST00000615951 KRTAP23-1A1A580 65 aa7.96□□□□□ -1.14
CDK11B-206ENST00000615951 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
CDK11B-206ENST00000615951 TNP1P09430 55 aa7.9□□□□□ -1.15
CDK11B-206ENST00000615951 KRTAP9-3Q9BYQ3 159 aa7.82□□□□□ -1.16
CDK11B-206ENST00000615951 MT1BP07438 61 aa7.78□□□□□ -1.16
CDK11B-206ENST00000615951 KRTAP9-2Q9BYQ4 174 aa7.78□□□□□ -1.16
CDK11B-206ENST00000615951 KRTAP10-5P60370 271 aa7.62□□□□□ -1.19
CDK11B-206ENST00000615951 MT1XP80297 61 aa7.62□□□□□ -1.19
CDK11B-206ENST00000615951 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
CDK11B-206ENST00000615951 LCE2BO14633 110 aa7.51□□□□□ -1.21
CDK11B-206ENST00000615951 KRTAP9-6A0A140TA67 174 aa7.48□□□□□ -1.21
CDK11B-206ENST00000615951 LCE3AQ5TA76 89 aa7.47□□□□□ -1.21
CDK11B-206ENST00000615951 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
CDK11B-206ENST00000615951 KRTAP8-1Q8IUC2 63 aa7.38□□□□□ -1.23
CDK11B-206ENST00000615951 CRCT1Q9UGL9 99 aa7.36□□□□□ -1.23
CDK11B-206ENST00000615951 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
CDK11B-206ENST00000615951 KRTAP10-7P60409 375 aaPredicted RBP7.32□□□□□ -1.24
CDK11B-206ENST00000615951 USH2AO75445 5202 aa7.23□□□□□ -1.25
CDK11B-206ENST00000615951 KRTAP12-3P60328 96 aa7.17□□□□□ -1.26
CDK11B-206ENST00000615951 SSPOA2VEC9 5147 aa7.16□□□□□ -1.26
CDK11B-206ENST00000615951 KRTAP19-6Q3LI70 58 aa6.97□□□□□ -1.29
CDK11B-206ENST00000615951 KRTAP19-5Q3LI72 72 aa6.97□□□□□ -1.29
CDK11B-206ENST00000615951 FCGBPQ9Y6R7 5405 aaPredicted RBP6.94□□□□□ -1.3
CDK11B-206ENST00000615951 KRTAP4-8A0A0G2JLE6 195 aa6.9□□□□□ -1.3
CDK11B-206ENST00000615951 KRTAP4-8Q9BYQ9 185 aa6.9□□□□□ -1.3
CDK11B-206ENST00000615951 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.86□□□□□ -1.31
CDK11B-206ENST00000615951 KRTAP19-7Q3SYF9 63 aa6.79□□□□□ -1.32
CDK11B-206ENST00000615951 LCE3CQ5T5A8 94 aa6.74□□□□□ -1.33
CDK11B-206ENST00000615951 KRTAP9-7A8MTY7 169 aa6.73□□□□□ -1.33
CDK11B-206ENST00000615951 KRTAP19-4Q3LI73 84 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms