RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 P0C880 135 aa7.09□□□□□ -1.27
SSBP2-220ENST00000615665 DNAH5Q8TE73 4624 aa7.08□□□□□ -1.28
SSBP2-220ENST00000615665 DNAH7Q8WXX0 4024 aa7.03□□□□□ -1.28
SSBP2-220ENST00000615665 PLAC4Q8WY50 150 aa7.01□□□□□ -1.29
SSBP2-220ENST00000615665 LRP1BQ9NZR2 4599 aa7.01□□□□□ -1.29
SSBP2-220ENST00000615665 MT1HL1P0DM35 61 aa6.97□□□□□ -1.29
SSBP2-220ENST00000615665 HECTD4Q9Y4D8 3996 aa6.95□□□□□ -1.3
SSBP2-220ENST00000615665 DYNC1H1Q14204 4646 aaKnown RBP6.92□□□□□ -1.3
SSBP2-220ENST00000615665 KRTAP10-6P60371 365 aaPredicted RBP6.91□□□□□ -1.3
SSBP2-220ENST00000615665 FRAS1Q86XX4 4008 aa6.89□□□□□ -1.31
SSBP2-220ENST00000615665 KRTAP3-3Q9BYR6 98 aa6.86□□□□□ -1.31
SSBP2-220ENST00000615665 FAT1Q14517 4588 aa6.86□□□□□ -1.31
SSBP2-220ENST00000615665 KRTAP13-4Q3LI77 160 aa6.86□□□□□ -1.31
SSBP2-220ENST00000615665 DNAH6Q9C0G6 4158 aa6.85□□□□□ -1.31
SSBP2-220ENST00000615665 KRTAP12-2P59991 146 aa6.83□□□□□ -1.32
SSBP2-220ENST00000615665 VPS13BQ7Z7G8 4022 aa6.83□□□□□ -1.32
SSBP2-220ENST00000615665 KRTAP3-2Q9BYR7 98 aa6.79□□□□□ -1.32
SSBP2-220ENST00000615665 SACSQ9NZJ4 4579 aa6.78□□□□□ -1.32
SSBP2-220ENST00000615665 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
SSBP2-220ENST00000615665 FAT2Q9NYQ8 4349 aa6.76□□□□□ -1.33
SSBP2-220ENST00000615665 TNP1P09430 55 aa6.76□□□□□ -1.33
SSBP2-220ENST00000615665 KRTAP4-5Q9BYR2 181 aa6.72□□□□□ -1.33
SSBP2-220ENST00000615665 HYDINQ4G0P3 5121 aa6.71□□□□□ -1.34
SSBP2-220ENST00000615665 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
SSBP2-220ENST00000615665 APOBP04114 4563 aaKnown RBP6.57□□□□□ -1.36
SSBP2-220ENST00000615665 PKD1P98161 4303 aa6.56□□□□□ -1.36
SSBP2-220ENST00000615665 PKHD1P08F94 4074 aa6.56□□□□□ -1.36
SSBP2-220ENST00000615665 RYR2Q92736 4967 aa6.51□□□□□ -1.37
SSBP2-220ENST00000615665 MYCBP2O75592 4640 aa6.48□□□□□ -1.37
SSBP2-220ENST00000615665 LRP1Q07954 4544 aaKnown RBP6.48□□□□□ -1.37
SSBP2-220ENST00000615665 KRTAP10-10P60014 251 aa6.48□□□□□ -1.37
SSBP2-220ENST00000615665 KIAA1109Q2LD37 5005 aa6.47□□□□□ -1.37
SSBP2-220ENST00000615665 RYR1P21817 5038 aa6.46□□□□□ -1.37
SSBP2-220ENST00000615665 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
SSBP2-220ENST00000615665 RYR3Q15413 4870 aa6.41□□□□□ -1.38
SSBP2-220ENST00000615665 FAT3Q8TDW7 4589 aa6.39□□□□□ -1.39
SSBP2-220ENST00000615665 LORP23490 312 aaPredicted RBP6.35□□□□□ -1.39
SSBP2-220ENST00000615665 KRTAP4-1Q9BYQ7 146 aa6.34□□□□□ -1.39
SSBP2-220ENST00000615665 KRTAP15-1Q3LI76 137 aa6.31□□□□□ -1.4
SSBP2-220ENST00000615665 HSPG2P98160 4391 aa6.29□□□□□ -1.4
SSBP2-220ENST00000615665 KMT2CQ8NEZ4 4911 aaKnown RBP6.28□□□□□ -1.4
SSBP2-220ENST00000615665 PKHD1L1Q86WI1 4243 aa6.24□□□□□ -1.41
SSBP2-220ENST00000615665 PRO2289Q9P1D8 64 aa6.15□□□□□ -1.43
SSBP2-220ENST00000615665 LRP2P98164 4655 aa6.13□□□□□ -1.43
SSBP2-220ENST00000615665 TNXBP22105 4242 aa6.13□□□□□ -1.43
SSBP2-220ENST00000615665 HERC2O95714 4834 aa6□□□□□ -1.45
SSBP2-220ENST00000615665 LPAP08519 4548 aa5.96□□□□□ -1.46
SSBP2-220ENST00000615665 KRTAP23-1A1A580 65 aa5.95□□□□□ -1.46
SSBP2-220ENST00000615665 EPPK1P58107 5090 aaKnown RBP5.93□□□□□ -1.46
SSBP2-220ENST00000615665 MT1HP80294 61 aa5.91□□□□□ -1.46
SSBP2-220ENST00000615665 SPRR2GQ9BYE4 73 aa5.87□□□□□ -1.47
SSBP2-220ENST00000615665 LCE3AQ5TA76 89 aa5.84□□□□□ -1.47
SSBP2-220ENST00000615665 MT2AP02795 61 aa5.84□□□□□ -1.48
SSBP2-220ENST00000615665 KRTAP10-12P60413 245 aa5.84□□□□□ -1.48
SSBP2-220ENST00000615665 BIRC6Q9NR09 4857 aa5.83□□□□□ -1.48
SSBP2-220ENST00000615665 ABCA13Q86UQ4 5058 aa5.8□□□□□ -1.48
SSBP2-220ENST00000615665 MT1FP04733 61 aa5.78□□□□□ -1.48
SSBP2-220ENST00000615665 KRTAP19-2Q3LHN2 52 aa5.77□□□□□ -1.49
SSBP2-220ENST00000615665 KRTAP12-3P60328 96 aa5.72□□□□□ -1.49
SSBP2-220ENST00000615665 KRTAP19-1Q8IUB9 90 aa5.71□□□□□ -1.5
SSBP2-220ENST00000615665 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
SSBP2-220ENST00000615665 HERC1Q15751 4861 aa5.68□□□□□ -1.5
SSBP2-220ENST00000615665 INE1O15225 51 aa5.62□□□□□ -1.51
SSBP2-220ENST00000615665 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
SSBP2-220ENST00000615665 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
SSBP2-220ENST00000615665 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
SSBP2-220ENST00000615665 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
SSBP2-220ENST00000615665 KRTAP9-8Q9BYQ0 159 aa5.55□□□□□ -1.52
SSBP2-220ENST00000615665 KRTAP8-1Q8IUC2 63 aa5.49□□□□□ -1.53
SSBP2-220ENST00000615665 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
SSBP2-220ENST00000615665 MT1BP07438 61 aa5.45□□□□□ -1.54
SSBP2-220ENST00000615665 MT1XP80297 61 aa5.43□□□□□ -1.54
SSBP2-220ENST00000615665 MUC2Q02817 5179 aa5.42□□□□□ -1.54
SSBP2-220ENST00000615665 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
SSBP2-220ENST00000615665 KRTAP10-7P60409 375 aaPredicted RBP5.37□□□□□ -1.55
SSBP2-220ENST00000615665 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
SSBP2-220ENST00000615665 KRTAP9-3Q9BYQ3 159 aa5.35□□□□□ -1.55
SSBP2-220ENST00000615665 RNF213Q63HN8 5207 aa5.33□□□□□ -1.56
SSBP2-220ENST00000615665 KRTAP19-5Q3LI72 72 aa5.31□□□□□ -1.56
SSBP2-220ENST00000615665 SPRR5A0A1B0GTR4 108 aa5.29□□□□□ -1.56
SSBP2-220ENST00000615665 FAT4Q6V0I7 4981 aa5.26□□□□□ -1.57
SSBP2-220ENST00000615665 LCE3CQ5T5A8 94 aa5.2□□□□□ -1.58
SSBP2-220ENST00000615665 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
SSBP2-220ENST00000615665 UBR4Q5T4S7 5183 aa5.18□□□□□ -1.58
SSBP2-220ENST00000615665 LCE2BO14633 110 aa5.14□□□□□ -1.59
SSBP2-220ENST00000615665 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
SSBP2-220ENST00000615665 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
SSBP2-220ENST00000615665 KRTAP4-8A0A0G2JLE6 195 aa5.07□□□□□ -1.6
SSBP2-220ENST00000615665 KRTAP4-8Q9BYQ9 185 aa5.07□□□□□ -1.6
SSBP2-220ENST00000615665 KRTAP19-4Q3LI73 84 aa5.01□□□□□ -1.61
SSBP2-220ENST00000615665 LCE2AQ5TA79 106 aaPredicted RBP4.95□□□□□ -1.62
SSBP2-220ENST00000615665 SPRR2FQ96RM1 72 aa4.86□□□□□ -1.63
SSBP2-220ENST00000615665 KRTAP4-7Q9BYR0 210 aa4.8□□□□□ -1.64
SSBP2-220ENST00000615665 MT1LQ93083 61 aa4.79□□□□□ -1.64
SSBP2-220ENST00000615665 MT1EP04732 61 aa4.78□□□□□ -1.64
SSBP2-220ENST00000615665 USH2AO75445 5202 aa4.75□□□□□ -1.65
SSBP2-220ENST00000615665 KRTAP19-6Q3LI70 58 aa4.73□□□□□ -1.65
SSBP2-220ENST00000615665 KRTAP19-7Q3SYF9 63 aa4.73□□□□□ -1.65
SSBP2-220ENST00000615665 DSTQ03001 7570 aaKnown RBP4.71□□□□□ -1.65
SSBP2-220ENST00000615665 MT1GP13640 62 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms