RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
VPS11-206ENST00000614944 H0YAA0 97 aa4.92□□□□□ -1.62
VPS11-206ENST00000614944 KRTAP17-1Q9BYP8 105 aa4.9□□□□□ -1.63
VPS11-206ENST00000614944 A0A1B0GVX0 72 aa4.88□□□□□ -1.63
VPS11-206ENST00000614944 EPPK1P58107 5090 aaKnown RBP4.88□□□□□ -1.63
VPS11-206ENST00000614944 FAT1Q14517 4588 aa4.87□□□□□ -1.63
VPS11-206ENST00000614944 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
VPS11-206ENST00000614944 BIRC6Q9NR09 4857 aa4.86□□□□□ -1.63
VPS11-206ENST00000614944 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
VPS11-206ENST00000614944 TNXBP22105 4242 aa4.84□□□□□ -1.63
VPS11-206ENST00000614944 FAT3Q8TDW7 4589 aa4.83□□□□□ -1.64
VPS11-206ENST00000614944 MT1HL1P0DM35 61 aa4.83□□□□□ -1.64
VPS11-206ENST00000614944 CAMK2N1Q7Z7J9 78 aa4.81□□□□□ -1.64
VPS11-206ENST00000614944 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
VPS11-206ENST00000614944 A0A1B0GU33 70 aa4.81□□□□□ -1.64
VPS11-206ENST00000614944 HERC2O95714 4834 aa4.8□□□□□ -1.64
VPS11-206ENST00000614944 IGKV2-30P06310 120 aa4.75□□□□□ -1.65
VPS11-206ENST00000614944 KRTAP4-5Q9BYR2 181 aa4.75□□□□□ -1.65
VPS11-206ENST00000614944 H1FX-AS1Q4G0G2 97 aa4.74□□□□□ -1.65
VPS11-206ENST00000614944 C10orf95Q9H7T3 257 aa4.74□□□□□ -1.65
VPS11-206ENST00000614944 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
VPS11-206ENST00000614944 LRP1Q07954 4544 aaKnown RBP4.67□□□□□ -1.66
VPS11-206ENST00000614944 MYCBP2O75592 4640 aa4.64□□□□□ -1.67
VPS11-206ENST00000614944 ABCA13Q86UQ4 5058 aa4.64□□□□□ -1.67
VPS11-206ENST00000614944 RPL37P61927 97 aaKnown RBP4.63□□□□□ -1.67
VPS11-206ENST00000614944 XP32Q5T750 250 aa4.63□□□□□ -1.67
VPS11-206ENST00000614944 LCE2DQ5TA82 110 aaPredicted RBP4.61□□□□□ -1.67
VPS11-206ENST00000614944 KRTAP3-3Q9BYR6 98 aa4.6□□□□□ -1.67
VPS11-206ENST00000614944 KRTAP3-2Q9BYR7 98 aa4.6□□□□□ -1.67
VPS11-206ENST00000614944 COX6B2Q6YFQ2 88 aa4.57□□□□□ -1.68
VPS11-206ENST00000614944 DMBT1Q9UGM3 2413 aaPredicted RBP4.56□□□□□ -1.68
VPS11-206ENST00000614944 C9orf92A6NGG3 77 aa4.56□□□□□ -1.68
VPS11-206ENST00000614944 MUC17Q685J3 4493 aa4.53□□□□□ -1.68
VPS11-206ENST00000614944 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
VPS11-206ENST00000614944 PCLOQ9Y6V0 5065 aa4.51□□□□□ -1.69
VPS11-206ENST00000614944 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
VPS11-206ENST00000614944 A0A0D9SG42 100 aa4.47□□□□□ -1.69
VPS11-206ENST00000614944 S4R3F8 94 aa4.4□□□□□ -1.7
VPS11-206ENST00000614944 R4GN34 69 aa4.4□□□□□ -1.71
VPS11-206ENST00000614944 HMCN2Q8NDA2 5059 aa4.38□□□□□ -1.71
VPS11-206ENST00000614944 HERC1Q15751 4861 aa4.36□□□□□ -1.71
VPS11-206ENST00000614944 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
VPS11-206ENST00000614944 LPAP08519 4548 aa4.33□□□□□ -1.72
VPS11-206ENST00000614944 KRTAP3-1Q9BYR8 98 aa4.33□□□□□ -1.72
VPS11-206ENST00000614944 LRP2P98164 4655 aa4.31□□□□□ -1.72
VPS11-206ENST00000614944 KRTAP12-2P59991 146 aa4.3□□□□□ -1.72
VPS11-206ENST00000614944 KRTAP4-1Q9BYQ7 146 aa4.3□□□□□ -1.72
VPS11-206ENST00000614944 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
VPS11-206ENST00000614944 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
VPS11-206ENST00000614944 KRTAP23-1A1A580 65 aa4.26□□□□□ -1.73
VPS11-206ENST00000614944 INE1O15225 51 aa4.23□□□□□ -1.73
VPS11-206ENST00000614944 KRTAP12-1P59990 96 aa4.22□□□□□ -1.73
VPS11-206ENST00000614944 LCE2BO14633 110 aa4.19□□□□□ -1.74
VPS11-206ENST00000614944 LCE2CQ5TA81 110 aa4.16□□□□□ -1.74
VPS11-206ENST00000614944 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
VPS11-206ENST00000614944 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
VPS11-206ENST00000614944 PP632Q6XCG6 107 aa4.07□□□□□ -1.76
VPS11-206ENST00000614944 MT1HP80294 61 aa4.06□□□□□ -1.76
VPS11-206ENST00000614944 UBR4Q5T4S7 5183 aa4.04□□□□□ -1.76
VPS11-206ENST00000614944 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
VPS11-206ENST00000614944 M0QZ58 72 aa4.02□□□□□ -1.77
VPS11-206ENST00000614944 LCE2AQ5TA79 106 aaPredicted RBP3.97□□□□□ -1.77
VPS11-206ENST00000614944 FAT4Q6V0I7 4981 aa3.95□□□□□ -1.78
VPS11-206ENST00000614944 MUC2Q02817 5179 aa3.95□□□□□ -1.78
VPS11-206ENST00000614944 LORP23490 312 aaPredicted RBP3.93□□□□□ -1.78
VPS11-206ENST00000614944 KRTAP9-8Q9BYQ0 159 aa3.93□□□□□ -1.78
VPS11-206ENST00000614944 M0R2T5 61 aa3.89□□□□□ -1.79
VPS11-206ENST00000614944 MT2AP02795 61 aa3.89□□□□□ -1.79
VPS11-206ENST00000614944 SPRR2GQ9BYE4 73 aa3.88□□□□□ -1.79
VPS11-206ENST00000614944 MT1FP04733 61 aa3.84□□□□□ -1.79
VPS11-206ENST00000614944 KRTAP19-8Q3LI54 63 aa3.8□□□□□ -1.8
VPS11-206ENST00000614944 KRTAP19-1Q8IUB9 90 aa3.8□□□□□ -1.8
VPS11-206ENST00000614944 KRTAP9-3Q9BYQ3 159 aa3.8□□□□□ -1.8
VPS11-206ENST00000614944 KRTAP10-10P60014 251 aa3.79□□□□□ -1.8
VPS11-206ENST00000614944 MT1BP07438 61 aa3.67□□□□□ -1.82
VPS11-206ENST00000614944 TNP1P09430 55 aa3.63□□□□□ -1.83
VPS11-206ENST00000614944 MT1XP80297 61 aa3.54□□□□□ -1.84
VPS11-206ENST00000614944 KRTAP10-5P60370 271 aa3.54□□□□□ -1.84
VPS11-206ENST00000614944 KRTAP19-6Q3LI70 58 aa3.53□□□□□ -1.84
VPS11-206ENST00000614944 USH2AO75445 5202 aa3.46□□□□□ -1.86
VPS11-206ENST00000614944 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
VPS11-206ENST00000614944 KRTAP9-2Q9BYQ4 174 aa3.42□□□□□ -1.86
VPS11-206ENST00000614944 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
VPS11-206ENST00000614944 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.88
VPS11-206ENST00000614944 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
VPS11-206ENST00000614944 CRCT1Q9UGL9 99 aa3.31□□□□□ -1.88
VPS11-206ENST00000614944 FSIP2Q5CZC0 6907 aa3.29□□□□□ -1.88
VPS11-206ENST00000614944 LCE3AQ5TA76 89 aa3.28□□□□□ -1.88
VPS11-206ENST00000614944 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
VPS11-206ENST00000614944 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
VPS11-206ENST00000614944 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
VPS11-206ENST00000614944 KRTAP12-3P60328 96 aa3.17□□□□□ -1.9
VPS11-206ENST00000614944 KRTAP2-2Q9BYT5 123 aa3.17□□□□□ -1.9
VPS11-206ENST00000614944 KRTAP19-7Q3SYF9 63 aa3.16□□□□□ -1.9
VPS11-206ENST00000614944 KRTAP4-8A0A0G2JLE6 195 aa3.15□□□□□ -1.9
VPS11-206ENST00000614944 KRTAP4-8Q9BYQ9 185 aa3.15□□□□□ -1.9
VPS11-206ENST00000614944 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
VPS11-206ENST00000614944 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
VPS11-206ENST00000614944 MT1EP04732 61 aa3.12□□□□□ -1.91
VPS11-206ENST00000614944 KRTAP2-3P0C7H8 128 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 274.2 ms