RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 CCDC168Q8NDH2 2452 aa1.39□□□□□ -2.19
CBWD3-209ENST00000614377 HYDINQ4G0P3 5121 aa1.39□□□□□ -2.19
CBWD3-209ENST00000614377 CUBNO60494 3623 aa1.39□□□□□ -2.19
CBWD3-209ENST00000614377 KRTAP10-3P60369 221 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 VPS13CQ709C8 3753 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 USP9YO00507 2555 aaPredicted RBP1.38□□□□□ -2.19
CBWD3-209ENST00000614377 HIVEP2P31629 2446 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 A0A096LPF7 62 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 LCE3CQ5T5A8 94 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 ANK3Q12955 4377 aaKnown RBP1.38□□□□□ -2.19
CBWD3-209ENST00000614377 LRRK2Q5S007 2527 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 EPPK1P58107 5090 aaKnown RBP1.38□□□□□ -2.19
CBWD3-209ENST00000614377 KIAA1109Q2LD37 5005 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 CEP295Q9C0D2 2601 aa1.38□□□□□ -2.19
CBWD3-209ENST00000614377 RYR2Q92736 4967 aa1.37□□□□□ -2.19
CBWD3-209ENST00000614377 ITPR2Q14571 2701 aa1.37□□□□□ -2.19
CBWD3-209ENST00000614377 DNAH6Q9C0G6 4158 aa1.37□□□□□ -2.19
CBWD3-209ENST00000614377 APLNQ9ULZ1 77 aa1.37□□□□□ -2.19
CBWD3-209ENST00000614377 CSPG4Q6UVK1 2322 aa1.37□□□□□ -2.19
CBWD3-209ENST00000614377 KMT2CQ8NEZ4 4911 aaKnown RBP1.37□□□□□ -2.19
CBWD3-209ENST00000614377 DNAH3Q8TD57 4116 aa1.37□□□□□ -2.19
CBWD3-209ENST00000614377 CMYA5Q8N3K9 4069 aa1.37□□□□□ -2.19
CBWD3-209ENST00000614377 ADGRG4Q8IZF6 3080 aa1.36□□□□□ -2.19
CBWD3-209ENST00000614377 SVEP1Q4LDE5 3571 aa1.36□□□□□ -2.19
CBWD3-209ENST00000614377 LCE3AQ5TA76 89 aa1.36□□□□□ -2.19
CBWD3-209ENST00000614377 DCHS2Q6V1P9 2916 aa1.36□□□□□ -2.19
CBWD3-209ENST00000614377 ATRQ13535 2644 aa1.36□□□□□ -2.19
CBWD3-209ENST00000614377 A0A0D9SG42 100 aa1.35□□□□□ -2.19
CBWD3-209ENST00000614377 Q5VSD8 79 aa1.35□□□□□ -2.19
CBWD3-209ENST00000614377 CSMD2Q7Z408 3487 aa1.35□□□□□ -2.19
CBWD3-209ENST00000614377 DNAH7Q8WXX0 4024 aa1.35□□□□□ -2.19
CBWD3-209ENST00000614377 MTORP42345 2549 aa1.35□□□□□ -2.19
CBWD3-209ENST00000614377 APCP25054 2843 aa1.35□□□□□ -2.19
CBWD3-209ENST00000614377 ANKHD1Q8IWZ3 2542 aaKnown RBP1.35□□□□□ -2.19
CBWD3-209ENST00000614377 H3BNG1 76 aa1.34□□□□□ -2.19
CBWD3-209ENST00000614377 JMJD1CQ15652 2540 aa1.34□□□□□ -2.19
CBWD3-209ENST00000614377 TENM1Q9UKZ4 2725 aa1.34□□□□□ -2.2
CBWD3-209ENST00000614377 A0A096LNI7 61 aa1.34□□□□□ -2.2
CBWD3-209ENST00000614377 LINC01556Q5JQF7 62 aa1.34□□□□□ -2.2
CBWD3-209ENST00000614377 ROS1P08922 2347 aa1.33□□□□□ -2.2
CBWD3-209ENST00000614377 PKHD1L1Q86WI1 4243 aa1.33□□□□□ -2.2
CBWD3-209ENST00000614377 NIPBLQ6KC79 2804 aaeCLIP1.33□□□□□ -2.2
CBWD3-209ENST00000614377 PRKDCP78527 4128 aaKnown RBP1.33□□□□□ -2.2
CBWD3-209ENST00000614377 DNAH10Q8IVF4 4471 aa1.33□□□□□ -2.2
CBWD3-209ENST00000614377 KMT2AQ03164 3969 aa1.33□□□□□ -2.2
CBWD3-209ENST00000614377 NBEAL1Q6ZS30 2694 aa1.32□□□□□ -2.2
CBWD3-209ENST00000614377 DNAH17Q9UFH2 4485 aa1.32□□□□□ -2.2
CBWD3-209ENST00000614377 DNAH2Q9P225 4427 aa1.32□□□□□ -2.2
CBWD3-209ENST00000614377 STAB1Q9NY15 2570 aa1.32□□□□□ -2.2
CBWD3-209ENST00000614377 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
CBWD3-209ENST00000614377 HECTD4Q9Y4D8 3996 aa1.32□□□□□ -2.2
CBWD3-209ENST00000614377 RYR1P21817 5038 aa1.32□□□□□ -2.2
CBWD3-209ENST00000614377 ZANQ9Y493 2812 aa1.31□□□□□ -2.2
CBWD3-209ENST00000614377 COL7A1Q02388 2944 aa1.31□□□□□ -2.2
CBWD3-209ENST00000614377 FLNCQ14315 2725 aa1.31□□□□□ -2.2
CBWD3-209ENST00000614377 NBASA2RRP1 2371 aa1.3□□□□□ -2.2
CBWD3-209ENST00000614377 SPINK6Q6UWN8 80 aa1.3□□□□□ -2.2
CBWD3-209ENST00000614377 FAT3Q8TDW7 4589 aa1.3□□□□□ -2.2
CBWD3-209ENST00000614377 DNAH9Q9NYC9 4486 aa1.3□□□□□ -2.2
CBWD3-209ENST00000614377 UBR4Q5T4S7 5183 aa1.3□□□□□ -2.2
CBWD3-209ENST00000614377 ZNF469Q96JG9 3925 aaPredicted RBP1.29□□□□□ -2.2
CBWD3-209ENST00000614377 SACSQ9NZJ4 4579 aa1.29□□□□□ -2.2
CBWD3-209ENST00000614377 UTP20O75691 2785 aaKnown RBP1.29□□□□□ -2.2
CBWD3-209ENST00000614377 M0QZ58 72 aa1.29□□□□□ -2.2
CBWD3-209ENST00000614377 KRTAP10-10P60014 251 aa1.29□□□□□ -2.2
CBWD3-209ENST00000614377 KRTAP10-1P60331 282 aa1.29□□□□□ -2.2
CBWD3-209ENST00000614377 NSD1Q96L73 2696 aaPredicted RBP1.28□□□□□ -2.2
CBWD3-209ENST00000614377 NEBP20929 6669 aa1.28□□□□□ -2.2
CBWD3-209ENST00000614377 HRNRQ86YZ3 2850 aaPredicted RBP1.28□□□□□ -2.2
CBWD3-209ENST00000614377 HUWE1Q7Z6Z7 4374 aaKnown RBP1.28□□□□□ -2.2
CBWD3-209ENST00000614377 PKD1L1Q8TDX9 2849 aa1.27□□□□□ -2.21
CBWD3-209ENST00000614377 SPART-AS1P0CW21 52 aa1.26□□□□□ -2.21
CBWD3-209ENST00000614377 CRCT1Q9UGL9 99 aa1.26□□□□□ -2.21
CBWD3-209ENST00000614377 HERC1Q15751 4861 aa1.26□□□□□ -2.21
CBWD3-209ENST00000614377 PKD1P98161 4303 aa1.26□□□□□ -2.21
CBWD3-209ENST00000614377 LCE3EQ5T5B0 92 aa1.26□□□□□ -2.21
CBWD3-209ENST00000614377 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
CBWD3-209ENST00000614377 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
CBWD3-209ENST00000614377 APOBP04114 4563 aaKnown RBP1.25□□□□□ -2.21
CBWD3-209ENST00000614377 MXRA5Q9NR99 2828 aa1.25□□□□□ -2.21
CBWD3-209ENST00000614377 ABCA13Q86UQ4 5058 aa1.24□□□□□ -2.21
CBWD3-209ENST00000614377 NBEAL2Q6ZNJ1 2754 aa1.24□□□□□ -2.21
CBWD3-209ENST00000614377 NOTCH1P46531 2555 aa1.24□□□□□ -2.21
CBWD3-209ENST00000614377 MGAM2Q2M2H8 2515 aa1.23□□□□□ -2.21
CBWD3-209ENST00000614377 FAT4Q6V0I7 4981 aa1.23□□□□□ -2.21
CBWD3-209ENST00000614377 HSPG2P98160 4391 aa1.23□□□□□ -2.21
CBWD3-209ENST00000614377 DMBT1Q9UGM3 2413 aaPredicted RBP1.22□□□□□ -2.21
CBWD3-209ENST00000614377 DEFB4AO15263 64 aa1.22□□□□□ -2.21
CBWD3-209ENST00000614377 TLN2Q9Y4G6 2542 aa1.22□□□□□ -2.21
CBWD3-209ENST00000614377 TGP01266 2768 aa1.22□□□□□ -2.21
CBWD3-209ENST00000614377 LRP1BQ9NZR2 4599 aa1.22□□□□□ -2.21
CBWD3-209ENST00000614377 MUC2Q02817 5179 aa1.21□□□□□ -2.22
CBWD3-209ENST00000614377 HTN3P15516 51 aa1.2□□□□□ -2.22
CBWD3-209ENST00000614377 DEFB135Q30KP9 77 aa1.2□□□□□ -2.22
CBWD3-209ENST00000614377 SMR3AQ99954 134 aa1.2□□□□□ -2.22
CBWD3-209ENST00000614377 SSPOA2VEC9 5147 aa1.2□□□□□ -2.22
CBWD3-209ENST00000614377 ACANP16112 2415 aa1.19□□□□□ -2.22
CBWD3-209ENST00000614377 SONP18583 2426 aaKnown RBP1.19□□□□□ -2.22
CBWD3-209ENST00000614377 KRTAP6-3Q3LI67 103 aa1.19□□□□□ -2.22
CBWD3-209ENST00000614377 FAT2Q9NYQ8 4349 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms