RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
PPARGC1A-217ENST00000613098 TNXBP22105 4242 aa3.95□□□□□ -1.78
PPARGC1A-217ENST00000613098 HSPG2P98160 4391 aa3.94□□□□□ -1.78
PPARGC1A-217ENST00000613098 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
PPARGC1A-217ENST00000613098 KIAA1109Q2LD37 5005 aa3.93□□□□□ -1.78
PPARGC1A-217ENST00000613098 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
PPARGC1A-217ENST00000613098 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
PPARGC1A-217ENST00000613098 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.78
PPARGC1A-217ENST00000613098 A0A1B0GU33 70 aa3.9□□□□□ -1.79
PPARGC1A-217ENST00000613098 LPAP08519 4548 aa3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 COX6B2Q6YFQ2 88 aa3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
PPARGC1A-217ENST00000613098 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
PPARGC1A-217ENST00000613098 LCE2BO14633 110 aa3.84□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
PPARGC1A-217ENST00000613098 RYR1P21817 5038 aa3.82□□□□□ -1.8
PPARGC1A-217ENST00000613098 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
PPARGC1A-217ENST00000613098 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
PPARGC1A-217ENST00000613098 DMBT1Q9UGM3 2413 aaPredicted RBP3.78□□□□□ -1.8
PPARGC1A-217ENST00000613098 ROMO1P60602 79 aa3.77□□□□□ -1.81
PPARGC1A-217ENST00000613098 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
PPARGC1A-217ENST00000613098 P0C880 135 aa3.74□□□□□ -1.81
PPARGC1A-217ENST00000613098 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
PPARGC1A-217ENST00000613098 XP32Q5T750 250 aa3.74□□□□□ -1.81
PPARGC1A-217ENST00000613098 LRP2P98164 4655 aa3.72□□□□□ -1.81
PPARGC1A-217ENST00000613098 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
PPARGC1A-217ENST00000613098 A0A0D9SG42 100 aa3.7□□□□□ -1.82
PPARGC1A-217ENST00000613098 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
PPARGC1A-217ENST00000613098 S4R3F8 94 aa3.68□□□□□ -1.82
PPARGC1A-217ENST00000613098 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
PPARGC1A-217ENST00000613098 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
PPARGC1A-217ENST00000613098 K7ERS5 55 aa3.66□□□□□ -1.82
PPARGC1A-217ENST00000613098 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
PPARGC1A-217ENST00000613098 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
PPARGC1A-217ENST00000613098 Q5VSD8 79 aa3.64□□□□□ -1.83
PPARGC1A-217ENST00000613098 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
PPARGC1A-217ENST00000613098 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
PPARGC1A-217ENST00000613098 MUC17Q685J3 4493 aa3.59□□□□□ -1.83
PPARGC1A-217ENST00000613098 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.83
PPARGC1A-217ENST00000613098 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
PPARGC1A-217ENST00000613098 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
PPARGC1A-217ENST00000613098 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
PPARGC1A-217ENST00000613098 M0QZ58 72 aa3.52□□□□□ -1.85
PPARGC1A-217ENST00000613098 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
PPARGC1A-217ENST00000613098 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
PPARGC1A-217ENST00000613098 KRTAP4-1Q9BYQ7 146 aa3.49□□□□□ -1.85
PPARGC1A-217ENST00000613098 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
PPARGC1A-217ENST00000613098 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
PPARGC1A-217ENST00000613098 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
PPARGC1A-217ENST00000613098 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
PPARGC1A-217ENST00000613098 HERC1Q15751 4861 aa3.46□□□□□ -1.86
PPARGC1A-217ENST00000613098 MUC2Q02817 5179 aa3.45□□□□□ -1.86
PPARGC1A-217ENST00000613098 FAT4Q6V0I7 4981 aa3.45□□□□□ -1.86
PPARGC1A-217ENST00000613098 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
PPARGC1A-217ENST00000613098 R4GN34 69 aa3.4□□□□□ -1.87
PPARGC1A-217ENST00000613098 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
PPARGC1A-217ENST00000613098 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
PPARGC1A-217ENST00000613098 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.88
PPARGC1A-217ENST00000613098 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
PPARGC1A-217ENST00000613098 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
PPARGC1A-217ENST00000613098 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
PPARGC1A-217ENST00000613098 PP632Q6XCG6 107 aa3.21□□□□□ -1.89
PPARGC1A-217ENST00000613098 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
PPARGC1A-217ENST00000613098 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
PPARGC1A-217ENST00000613098 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
PPARGC1A-217ENST00000613098 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
PPARGC1A-217ENST00000613098 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
PPARGC1A-217ENST00000613098 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
PPARGC1A-217ENST00000613098 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
PPARGC1A-217ENST00000613098 TNP1P09430 55 aa3.12□□□□□ -1.91
PPARGC1A-217ENST00000613098 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
PPARGC1A-217ENST00000613098 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
PPARGC1A-217ENST00000613098 MT1FP04733 61 aa3.05□□□□□ -1.92
PPARGC1A-217ENST00000613098 MT1HP80294 61 aa3.05□□□□□ -1.92
PPARGC1A-217ENST00000613098 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
PPARGC1A-217ENST00000613098 MT2AP02795 61 aa3.02□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
PPARGC1A-217ENST00000613098 MT1BP07438 61 aa2.98□□□□□ -1.93
PPARGC1A-217ENST00000613098 MT1XP80297 61 aa2.97□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
PPARGC1A-217ENST00000613098 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
PPARGC1A-217ENST00000613098 M0R2T5 61 aa2.9□□□□□ -1.94
PPARGC1A-217ENST00000613098 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
PPARGC1A-217ENST00000613098 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
PPARGC1A-217ENST00000613098 USH2AO75445 5202 aa2.82□□□□□ -1.96
PPARGC1A-217ENST00000613098 KMT2DO14686 5537 aa2.82□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP4-8Q9BYQ9 185 aa2.81□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms