RNA–Protein interactions for RNA: ENST00000613098.4

PPARGC1A-217, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best) BASIC

Gene PPARGC1A, Length 3,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-217ENST00000613098 C9orf92A6NGG3 77 aa3.95□□□□□ -1.78
PPARGC1A-217ENST00000613098 TNXBP22105 4242 aa3.95□□□□□ -1.78
PPARGC1A-217ENST00000613098 HSPG2P98160 4391 aa3.94□□□□□ -1.78
PPARGC1A-217ENST00000613098 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
PPARGC1A-217ENST00000613098 KIAA1109Q2LD37 5005 aa3.93□□□□□ -1.78
PPARGC1A-217ENST00000613098 SMR3BP02814 79 aaPredicted RBP3.93□□□□□ -1.78
PPARGC1A-217ENST00000613098 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
PPARGC1A-217ENST00000613098 H1FX-AS1Q4G0G2 97 aa3.9□□□□□ -1.78
PPARGC1A-217ENST00000613098 A0A1B0GU33 70 aa3.9□□□□□ -1.79
PPARGC1A-217ENST00000613098 LPAP08519 4548 aa3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 COX6B2Q6YFQ2 88 aa3.87□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP25-1Q3LHN0 102 aa3.86□□□□□ -1.79
PPARGC1A-217ENST00000613098 MYCBP2O75592 4640 aa3.86□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP13-4Q3LI77 160 aa3.85□□□□□ -1.79
PPARGC1A-217ENST00000613098 LCE2BO14633 110 aa3.84□□□□□ -1.79
PPARGC1A-217ENST00000613098 KRTAP10-8P60410 259 aa3.83□□□□□ -1.8
PPARGC1A-217ENST00000613098 RYR1P21817 5038 aa3.82□□□□□ -1.8
PPARGC1A-217ENST00000613098 CRIPTQ9P021 101 aa3.81□□□□□ -1.8
PPARGC1A-217ENST00000613098 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
PPARGC1A-217ENST00000613098 DMBT1Q9UGM3 2413 aaPredicted RBP3.78□□□□□ -1.8
PPARGC1A-217ENST00000613098 ROMO1P60602 79 aa3.77□□□□□ -1.81
PPARGC1A-217ENST00000613098 TPRXLQ17RH7 258 aa3.75□□□□□ -1.81
PPARGC1A-217ENST00000613098 P0C880 135 aa3.74□□□□□ -1.81
PPARGC1A-217ENST00000613098 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
PPARGC1A-217ENST00000613098 XP32Q5T750 250 aa3.74□□□□□ -1.81
PPARGC1A-217ENST00000613098 LRP2P98164 4655 aa3.72□□□□□ -1.81
PPARGC1A-217ENST00000613098 KRTAP9-6A0A140TA67 174 aa3.71□□□□□ -1.82
PPARGC1A-217ENST00000613098 A0A0D9SG42 100 aa3.7□□□□□ -1.82
PPARGC1A-217ENST00000613098 KRTAP12-2P59991 146 aa3.7□□□□□ -1.82
PPARGC1A-217ENST00000613098 S4R3F8 94 aa3.68□□□□□ -1.82
PPARGC1A-217ENST00000613098 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
PPARGC1A-217ENST00000613098 MT1HL1P0DM35 61 aa3.67□□□□□ -1.82
PPARGC1A-217ENST00000613098 K7ERS5 55 aa3.66□□□□□ -1.82
PPARGC1A-217ENST00000613098 KRTAP12-1P59990 96 aa3.66□□□□□ -1.82
PPARGC1A-217ENST00000613098 LCE2CQ5TA81 110 aa3.66□□□□□ -1.82
PPARGC1A-217ENST00000613098 Q5VSD8 79 aa3.64□□□□□ -1.83
PPARGC1A-217ENST00000613098 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
PPARGC1A-217ENST00000613098 KRTAP15-1Q3LI76 137 aa3.61□□□□□ -1.83
PPARGC1A-217ENST00000613098 MUC17Q685J3 4493 aa3.59□□□□□ -1.83
PPARGC1A-217ENST00000613098 KRTAP9-2Q9BYQ4 174 aa3.59□□□□□ -1.83
PPARGC1A-217ENST00000613098 HMCN2Q8NDA2 5059 aa3.57□□□□□ -1.84
PPARGC1A-217ENST00000613098 SPINT4Q6UDR6 99 aa3.54□□□□□ -1.84
PPARGC1A-217ENST00000613098 LORP23490 312 aaPredicted RBP3.53□□□□□ -1.84
PPARGC1A-217ENST00000613098 M0QZ58 72 aa3.52□□□□□ -1.85
PPARGC1A-217ENST00000613098 LCE2AQ5TA79 106 aaPredicted RBP3.51□□□□□ -1.85
PPARGC1A-217ENST00000613098 KRTAP19-2Q3LHN2 52 aa3.49□□□□□ -1.85
PPARGC1A-217ENST00000613098 KRTAP4-1Q9BYQ7 146 aa3.49□□□□□ -1.85
PPARGC1A-217ENST00000613098 LOC100996750A0A140TA64 210 aa3.48□□□□□ -1.85
PPARGC1A-217ENST00000613098 NDUFAF8A1L188 74 aa3.48□□□□□ -1.85
PPARGC1A-217ENST00000613098 KRTAP4-6Q9BYQ5 205 aa3.48□□□□□ -1.85
PPARGC1A-217ENST00000613098 LUZP6Q538Z0 58 aa3.46□□□□□ -1.86
PPARGC1A-217ENST00000613098 HERC1Q15751 4861 aa3.46□□□□□ -1.86
PPARGC1A-217ENST00000613098 MUC2Q02817 5179 aa3.45□□□□□ -1.86
PPARGC1A-217ENST00000613098 FAT4Q6V0I7 4981 aa3.45□□□□□ -1.86
PPARGC1A-217ENST00000613098 SEC61BP60468 96 aaKnown RBP3.43□□□□□ -1.86
PPARGC1A-217ENST00000613098 R4GN34 69 aa3.4□□□□□ -1.87
PPARGC1A-217ENST00000613098 FLGP20930 4061 aaPredicted RBP3.39□□□□□ -1.87
PPARGC1A-217ENST00000613098 CRCT1Q9UGL9 99 aa3.37□□□□□ -1.87
PPARGC1A-217ENST00000613098 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.88
PPARGC1A-217ENST00000613098 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
PPARGC1A-217ENST00000613098 RNF213Q63HN8 5207 aa3.28□□□□□ -1.88
PPARGC1A-217ENST00000613098 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
PPARGC1A-217ENST00000613098 PP632Q6XCG6 107 aa3.21□□□□□ -1.89
PPARGC1A-217ENST00000613098 SSPOA2VEC9 5147 aa3.21□□□□□ -1.9
PPARGC1A-217ENST00000613098 CAMK2N1Q7Z7J9 78 aa3.19□□□□□ -1.9
PPARGC1A-217ENST00000613098 SPRR5A0A1B0GTR4 108 aa3.19□□□□□ -1.9
PPARGC1A-217ENST00000613098 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.19□□□□□ -1.9
PPARGC1A-217ENST00000613098 KRTAP19-1Q8IUB9 90 aa3.16□□□□□ -1.9
PPARGC1A-217ENST00000613098 KRTAP23-1A1A580 65 aa3.15□□□□□ -1.91
PPARGC1A-217ENST00000613098 SPRR2GQ9BYE4 73 aa3.13□□□□□ -1.91
PPARGC1A-217ENST00000613098 TNP1P09430 55 aa3.12□□□□□ -1.91
PPARGC1A-217ENST00000613098 KRTAP9-8Q9BYQ0 159 aa3.1□□□□□ -1.91
PPARGC1A-217ENST00000613098 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
PPARGC1A-217ENST00000613098 MT1FP04733 61 aa3.05□□□□□ -1.92
PPARGC1A-217ENST00000613098 MT1HP80294 61 aa3.05□□□□□ -1.92
PPARGC1A-217ENST00000613098 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
PPARGC1A-217ENST00000613098 MT2AP02795 61 aa3.02□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP5-3Q6L8H2 238 aa3.01□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP19-8Q3LI54 63 aa2.98□□□□□ -1.93
PPARGC1A-217ENST00000613098 MT1BP07438 61 aa2.98□□□□□ -1.93
PPARGC1A-217ENST00000613098 MT1XP80297 61 aa2.97□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP8-1Q8IUC2 63 aa2.97□□□□□ -1.93
PPARGC1A-217ENST00000613098 KRTAP10-10P60014 251 aa2.93□□□□□ -1.94
PPARGC1A-217ENST00000613098 KRTAP10-7P60409 375 aaPredicted RBP2.91□□□□□ -1.94
PPARGC1A-217ENST00000613098 M0R2T5 61 aa2.9□□□□□ -1.94
PPARGC1A-217ENST00000613098 KRTAP10-12P60413 245 aa2.9□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP9-3Q9BYQ3 159 aa2.89□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP19-6Q3LI70 58 aa2.87□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
PPARGC1A-217ENST00000613098 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
PPARGC1A-217ENST00000613098 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
PPARGC1A-217ENST00000613098 USH2AO75445 5202 aa2.82□□□□□ -1.96
PPARGC1A-217ENST00000613098 KMT2DO14686 5537 aa2.82□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP4-8Q9BYQ9 185 aa2.81□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP2-3P0C7H8 128 aa2.8□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP2-4Q9BYR9 128 aa2.8□□□□□ -1.96
PPARGC1A-217ENST00000613098 KRTAP5-9P26371 169 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 282.5 ms