RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 C1orf64Q8NEQ6 169 aa10.07□□□□□ -0.8
MMP28-203ENST00000612672 BPY2O14599 106 aa10.06□□□□□ -0.8
MMP28-203ENST00000612672 LOC100996750A0A140TA64 210 aa10.05□□□□□ -0.8
MMP28-203ENST00000612672 KRTAP4-6Q9BYQ5 205 aa10.05□□□□□ -0.8
MMP28-203ENST00000612672 CXCL6P80162 114 aa10.02□□□□□ -0.81
MMP28-203ENST00000612672 GTF2H5Q6ZYL4 71 aa9.99□□□□□ -0.81
MMP28-203ENST00000612672 KRTAP2-2Q9BYT5 123 aa9.99□□□□□ -0.81
MMP28-203ENST00000612672 KRTAP2-1Q9BYU5 128 aa9.99□□□□□ -0.81
MMP28-203ENST00000612672 LCE1AQ5T7P2 110 aa9.98□□□□□ -0.81
MMP28-203ENST00000612672 F8W1H4 67 aa9.93□□□□□ -0.82
MMP28-203ENST00000612672 A0A087WVE0 104 aa9.92□□□□□ -0.82
MMP28-203ENST00000612672 ETDBQ3ZM63 59 aa9.92□□□□□ -0.82
MMP28-203ENST00000612672 UBL5Q9BZL1 73 aa9.91□□□□□ -0.82
MMP28-203ENST00000612672 CRIPTQ9P021 101 aa9.91□□□□□ -0.82
MMP28-203ENST00000612672 MT1XP80297 61 aa9.9□□□□□ -0.82
MMP28-203ENST00000612672 KRTAP8-1Q8IUC2 63 aa9.86□□□□□ -0.83
MMP28-203ENST00000612672 SPRR2DP22532 72 aa9.81□□□□□ -0.84
MMP28-203ENST00000612672 PRO2289Q9P1D8 64 aa9.72□□□□□ -0.85
MMP28-203ENST00000612672 KRTAP4-8A0A0G2JLE6 195 aa9.71□□□□□ -0.86
MMP28-203ENST00000612672 KRTAP4-8Q9BYQ9 185 aa9.71□□□□□ -0.86
MMP28-203ENST00000612672 KRTAP12-2P59991 146 aa9.69□□□□□ -0.86
MMP28-203ENST00000612672 CYP4F30PQ9H0H9 118 aa9.64□□□□□ -0.87
MMP28-203ENST00000612672 A0A1B0GV90 55 aa9.63□□□□□ -0.87
MMP28-203ENST00000612672 H0YAA0 97 aa9.63□□□□□ -0.87
MMP28-203ENST00000612672 A8MUN3 132 aa9.62□□□□□ -0.87
MMP28-203ENST00000612672 FAM240AA0A1B0GVK7 77 aa9.6□□□□□ -0.87
MMP28-203ENST00000612672 ACYP1P07311 99 aa9.6□□□□□ -0.87
MMP28-203ENST00000612672 LCE3BQ5TA77 95 aa9.6□□□□□ -0.87
MMP28-203ENST00000612672 TP53AIP1Q9HCN2 124 aa9.6□□□□□ -0.87
MMP28-203ENST00000612672 GPR98Q8WXG9 6306 aa9.58□□□□□ -0.88
MMP28-203ENST00000612672 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
MMP28-203ENST00000612672 PLAC4Q8WY50 150 aa9.52□□□□□ -0.89
MMP28-203ENST00000612672 ATP5EP2Q5VTU8 51 aa9.5□□□□□ -0.89
MMP28-203ENST00000612672 NDUFC1O43677 76 aa9.49□□□□□ -0.89
MMP28-203ENST00000612672 HIST1H4AP62805 103 aaKnown RBP9.47□□□□□ -0.89
MMP28-203ENST00000612672 KRTAP10-7P60409 375 aaPredicted RBP9.45□□□□□ -0.9
MMP28-203ENST00000612672 TRAV22A0A0B4J277 110 aa9.41□□□□□ -0.9
MMP28-203ENST00000612672 LINC00643Q86TS7 51 aa9.41□□□□□ -0.9
MMP28-203ENST00000612672 LOC101927531A0A1B0GV80 90 aa9.4□□□□□ -0.9
MMP28-203ENST00000612672 P0C880 135 aa9.34□□□□□ -0.91
MMP28-203ENST00000612672 KRTAP10-12P60413 245 aa9.34□□□□□ -0.91
MMP28-203ENST00000612672 UQCRQO14949 82 aa9.33□□□□□ -0.92
MMP28-203ENST00000612672 H0Y9P7 68 aa9.31□□□□□ -0.92
MMP28-203ENST00000612672 R4GN34 69 aa9.31□□□□□ -0.92
MMP28-203ENST00000612672 DSTQ03001 7570 aaKnown RBP9.3□□□□□ -0.92
MMP28-203ENST00000612672 M0QZ58 72 aa9.25□□□□□ -0.93
MMP28-203ENST00000612672 J3QR89 54 aa9.24□□□□□ -0.93
MMP28-203ENST00000612672 ATOX1O00244 68 aa9.22□□□□□ -0.93
MMP28-203ENST00000612672 OCR1Q9BZK8 76 aa9.21□□□□□ -0.94
MMP28-203ENST00000612672 KRTAP4-9Q9BYQ8 210 aa9.18□□□□□ -0.94
MMP28-203ENST00000612672 LINC01554Q52M75 96 aa9.17□□□□□ -0.94
MMP28-203ENST00000612672 LINC00208Q96KT6 92 aa9.17□□□□□ -0.94
MMP28-203ENST00000612672 MP68P56378 58 aa9.08□□□□□ -0.96
MMP28-203ENST00000612672 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
MMP28-203ENST00000612672 K7ERU9 68 aa9.05□□□□□ -0.96
MMP28-203ENST00000612672 MT-ATP8P03928 68 aa9.02□□□□□ -0.97
MMP28-203ENST00000612672 SCGB1A1P11684 91 aa9□□□□□ -0.97
MMP28-203ENST00000612672 H3BPC8 53 aa8.96□□□□□ -0.98
MMP28-203ENST00000612672 LCE5AQ5TCM9 118 aa8.95□□□□□ -0.98
MMP28-203ENST00000612672 LCE1DQ5T752 114 aa8.87□□□□□ -0.99
MMP28-203ENST00000612672 HMCN1Q96RW7 5635 aa8.87□□□□□ -0.99
MMP28-203ENST00000612672 KRTAP19-7Q3SYF9 63 aa8.86□□□□□ -0.99
MMP28-203ENST00000612672 DMAC1Q96GE9 116 aa8.86□□□□□ -0.99
MMP28-203ENST00000612672 KRTAP19-3Q7Z4W3 81 aa8.81□□□□□ -1
MMP28-203ENST00000612672 TRAV7A0A075B6U4 112 aa8.8□□□□□ -1
MMP28-203ENST00000612672 MT1EP04732 61 aa8.8□□□□□ -1
MMP28-203ENST00000612672 AHNAK2Q8IVF2 5795 aa8.79□□□□□ -1
MMP28-203ENST00000612672 SMIM20Q8N5G0 67 aa8.75□□□□□ -1.01
MMP28-203ENST00000612672 KRTAP4-12Q9BQ66 201 aa8.73□□□□□ -1.01
MMP28-203ENST00000612672 MT4P47944 62 aa8.67□□□□□ -1.02
MMP28-203ENST00000612672 SNURFQ9Y675 71 aa8.67□□□□□ -1.02
MMP28-203ENST00000612672 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
MMP28-203ENST00000612672 ACYP2P14621 99 aa8.62□□□□□ -1.03
MMP28-203ENST00000612672 LCE4AQ5TA78 99 aa8.59□□□□□ -1.03
MMP28-203ENST00000612672 KRTAP5-10Q6L8G5 202 aa8.58□□□□□ -1.04
MMP28-203ENST00000612672 KRTAP9-9Q9BYP9 154 aa8.58□□□□□ -1.04
MMP28-203ENST00000612672 KRTAP9-4Q9BYQ2 154 aa8.58□□□□□ -1.04
MMP28-203ENST00000612672 SERP2Q8N6R1 65 aa8.55□□□□□ -1.04
MMP28-203ENST00000612672 KRTAP13-4Q3LI77 160 aa8.51□□□□□ -1.05
MMP28-203ENST00000612672 MT1GP13640 62 aa8.47□□□□□ -1.05
MMP28-203ENST00000612672 SPANXA2-OT1Q8N9U9 137 aa8.46□□□□□ -1.06
MMP28-203ENST00000612672 CHKB-CPT1BH3BT56 60 aa8.45□□□□□ -1.06
MMP28-203ENST00000612672 KRTAP19-5Q3LI72 72 aa8.44□□□□□ -1.06
MMP28-203ENST00000612672 SPTSSBQ8NFR3 76 aa8.44□□□□□ -1.06
MMP28-203ENST00000612672 CAMK2N1Q7Z7J9 78 aa8.43□□□□□ -1.06
MMP28-203ENST00000612672 MT1MQ8N339 61 aa8.42□□□□□ -1.06
MMP28-203ENST00000612672 KRTAP5-4Q6L8H1 288 aa8.4□□□□□ -1.06
MMP28-203ENST00000612672 COX7CP15954 63 aa8.34□□□□□ -1.07
MMP28-203ENST00000612672 KRTAP4-3Q9BYR4 195 aa8.34□□□□□ -1.07
MMP28-203ENST00000612672 PP632Q6XCG6 107 aa8.33□□□□□ -1.08
MMP28-203ENST00000612672 A0A0D9SG42 100 aa8.31□□□□□ -1.08
MMP28-203ENST00000612672 MT1LQ93083 61 aa8.3□□□□□ -1.08
MMP28-203ENST00000612672 KRTAP5-7Q6L8G8 165 aa8.29□□□□□ -1.08
MMP28-203ENST00000612672 COA5Q86WW8 74 aa8.27□□□□□ -1.09
MMP28-203ENST00000612672 H7BZZ5 65 aa8.21□□□□□ -1.1
MMP28-203ENST00000612672 KRTAP5-3Q6L8H2 238 aa8.2□□□□□ -1.1
MMP28-203ENST00000612672 ANAPC13Q9BS18 74 aa8.2□□□□□ -1.1
MMP28-203ENST00000612672 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
MMP28-203ENST00000612672 CCDC179H3BU77 68 aa8□□□□□ -1.13
MMP28-203ENST00000612672 SERP1Q9Y6X1 66 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms