RNA–Protein interactions for RNA: ENST00000612286.4

HOXA3-207, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXA3, Length 3,396 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-207ENST00000612286 HSPG2P98160 4391 aa7.34□□□□□ -1.23
HOXA3-207ENST00000612286 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.23
HOXA3-207ENST00000612286 KRTAP10-8P60410 259 aa7.33□□□□□ -1.24
HOXA3-207ENST00000612286 P0C880 135 aa7.32□□□□□ -1.24
HOXA3-207ENST00000612286 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
HOXA3-207ENST00000612286 TPRXLQ17RH7 258 aa7.25□□□□□ -1.25
HOXA3-207ENST00000612286 KMT2CQ8NEZ4 4911 aaKnown RBP7.24□□□□□ -1.25
HOXA3-207ENST00000612286 S4R3F8 94 aa7.23□□□□□ -1.25
HOXA3-207ENST00000612286 LPAP08519 4548 aa7.23□□□□□ -1.25
HOXA3-207ENST00000612286 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
HOXA3-207ENST00000612286 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
HOXA3-207ENST00000612286 RPS29P62273 56 aaKnown RBP7.19□□□□□ -1.26
HOXA3-207ENST00000612286 NDUFAF8A1L188 74 aa7.17□□□□□ -1.26
HOXA3-207ENST00000612286 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
HOXA3-207ENST00000612286 PKHD1L1Q86WI1 4243 aa7.16□□□□□ -1.26
HOXA3-207ENST00000612286 LRP2P98164 4655 aa7.15□□□□□ -1.26
HOXA3-207ENST00000612286 KRTAP10-4P60372 401 aaPredicted RBP7.13□□□□□ -1.27
HOXA3-207ENST00000612286 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
HOXA3-207ENST00000612286 Q5VSD8 79 aa7.11□□□□□ -1.27
HOXA3-207ENST00000612286 XP32Q5T750 250 aa7.11□□□□□ -1.27
HOXA3-207ENST00000612286 KIAA1109Q2LD37 5005 aa7.09□□□□□ -1.27
HOXA3-207ENST00000612286 RYR1P21817 5038 aa7.04□□□□□ -1.28
HOXA3-207ENST00000612286 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
HOXA3-207ENST00000612286 M0QZ58 72 aa6.97□□□□□ -1.29
HOXA3-207ENST00000612286 KRTAP12-1P59990 96 aa6.97□□□□□ -1.29
HOXA3-207ENST00000612286 RYR3Q15413 4870 aa6.96□□□□□ -1.3
HOXA3-207ENST00000612286 RYR2Q92736 4967 aa6.95□□□□□ -1.3
HOXA3-207ENST00000612286 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
HOXA3-207ENST00000612286 TNXBP22105 4242 aa6.92□□□□□ -1.3
HOXA3-207ENST00000612286 KRTAP15-1Q3LI76 137 aa6.89□□□□□ -1.31
HOXA3-207ENST00000612286 R4GN34 69 aa6.89□□□□□ -1.31
HOXA3-207ENST00000612286 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
HOXA3-207ENST00000612286 MUC2Q02817 5179 aa6.81□□□□□ -1.32
HOXA3-207ENST00000612286 EPPK1P58107 5090 aaKnown RBP6.8□□□□□ -1.32
HOXA3-207ENST00000612286 LORP23490 312 aaPredicted RBP6.78□□□□□ -1.32
HOXA3-207ENST00000612286 MT1HL1P0DM35 61 aa6.72□□□□□ -1.33
HOXA3-207ENST00000612286 CAMK2N1Q7Z7J9 78 aa6.69□□□□□ -1.34
HOXA3-207ENST00000612286 J3QL48 77 aa6.66□□□□□ -1.34
HOXA3-207ENST00000612286 KRTAP4-5Q9BYR2 181 aa6.66□□□□□ -1.34
HOXA3-207ENST00000612286 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
HOXA3-207ENST00000612286 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
HOXA3-207ENST00000612286 A0A0A0MQY5 61 aa6.51□□□□□ -1.37
HOXA3-207ENST00000612286 FAT4Q6V0I7 4981 aa6.47□□□□□ -1.37
HOXA3-207ENST00000612286 LUZP6Q538Z0 58 aa6.46□□□□□ -1.37
HOXA3-207ENST00000612286 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
HOXA3-207ENST00000612286 HERC2O95714 4834 aa6.38□□□□□ -1.39
HOXA3-207ENST00000612286 MUC17Q685J3 4493 aa6.33□□□□□ -1.4
HOXA3-207ENST00000612286 HERC1Q15751 4861 aa6.29□□□□□ -1.4
HOXA3-207ENST00000612286 RNF213Q63HN8 5207 aa6.29□□□□□ -1.4
HOXA3-207ENST00000612286 PCLOQ9Y6V0 5065 aa6.27□□□□□ -1.41
HOXA3-207ENST00000612286 M0R2T5 61 aa6.21□□□□□ -1.42
HOXA3-207ENST00000612286 TNP1P09430 55 aa6.2□□□□□ -1.42
HOXA3-207ENST00000612286 PP632Q6XCG6 107 aa6.14□□□□□ -1.43
HOXA3-207ENST00000612286 HMCN2Q8NDA2 5059 aa6.1□□□□□ -1.43
HOXA3-207ENST00000612286 KRTAP19-2Q3LHN2 52 aa6.04□□□□□ -1.44
HOXA3-207ENST00000612286 UBR4Q5T4S7 5183 aa6.01□□□□□ -1.45
HOXA3-207ENST00000612286 FLGP20930 4061 aaPredicted RBP6.01□□□□□ -1.45
HOXA3-207ENST00000612286 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
HOXA3-207ENST00000612286 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
HOXA3-207ENST00000612286 BIRC6Q9NR09 4857 aa5.92□□□□□ -1.46
HOXA3-207ENST00000612286 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
HOXA3-207ENST00000612286 KRTAP19-1Q8IUB9 90 aa5.79□□□□□ -1.48
HOXA3-207ENST00000612286 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
HOXA3-207ENST00000612286 USH2AO75445 5202 aa5.78□□□□□ -1.48
HOXA3-207ENST00000612286 KMT2DO14686 5537 aa5.76□□□□□ -1.49
HOXA3-207ENST00000612286 MT1FP04733 61 aa5.72□□□□□ -1.49
HOXA3-207ENST00000612286 LCE2CQ5TA81 110 aa5.72□□□□□ -1.49
HOXA3-207ENST00000612286 SPRR2GQ9BYE4 73 aa5.65□□□□□ -1.51
HOXA3-207ENST00000612286 MT1HP80294 61 aa5.64□□□□□ -1.51
HOXA3-207ENST00000612286 MT2AP02795 61 aa5.64□□□□□ -1.51
HOXA3-207ENST00000612286 KRTAP12-3P60328 96 aa5.56□□□□□ -1.52
HOXA3-207ENST00000612286 LCE2DQ5TA82 110 aaPredicted RBP5.55□□□□□ -1.52
HOXA3-207ENST00000612286 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
HOXA3-207ENST00000612286 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
HOXA3-207ENST00000612286 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
HOXA3-207ENST00000612286 PRO2289Q9P1D8 64 aa5.52□□□□□ -1.53
HOXA3-207ENST00000612286 KRTAP9-8Q9BYQ0 159 aa5.48□□□□□ -1.53
HOXA3-207ENST00000612286 KRTAP10-5P60370 271 aa5.48□□□□□ -1.53
HOXA3-207ENST00000612286 MT1XP80297 61 aa5.48□□□□□ -1.53
HOXA3-207ENST00000612286 MT1BP07438 61 aa5.45□□□□□ -1.54
HOXA3-207ENST00000612286 KRTAP8-1Q8IUC2 63 aa5.43□□□□□ -1.54
HOXA3-207ENST00000612286 INE1O15225 51 aa5.38□□□□□ -1.55
HOXA3-207ENST00000612286 KRTAP4-8A0A0G2JLE6 195 aa5.33□□□□□ -1.56
HOXA3-207ENST00000612286 KRTAP4-8Q9BYQ9 185 aa5.33□□□□□ -1.56
HOXA3-207ENST00000612286 KRTAP19-5Q3LI72 72 aa5.32□□□□□ -1.56
HOXA3-207ENST00000612286 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
HOXA3-207ENST00000612286 KRTAP4-7Q9BYR0 210 aa5.28□□□□□ -1.56
HOXA3-207ENST00000612286 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
HOXA3-207ENST00000612286 DSTQ03001 7570 aaKnown RBP5.2□□□□□ -1.58
HOXA3-207ENST00000612286 LCE3CQ5T5A8 94 aa5.15□□□□□ -1.59
HOXA3-207ENST00000612286 LCE2BO14633 110 aa5.13□□□□□ -1.59
HOXA3-207ENST00000612286 KRTAP9-6A8MVA2 160 aa5.12□□□□□ -1.59
HOXA3-207ENST00000612286 OBSCNQ5VST9 7968 aa5.12□□□□□ -1.59
HOXA3-207ENST00000612286 FCGBPQ9Y6R7 5405 aaPredicted RBP5.1□□□□□ -1.59
HOXA3-207ENST00000612286 LCE2AQ5TA79 106 aaPredicted RBP5.1□□□□□ -1.59
HOXA3-207ENST00000612286 CRCT1Q9UGL9 99 aa5.09□□□□□ -1.59
HOXA3-207ENST00000612286 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
HOXA3-207ENST00000612286 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
HOXA3-207ENST00000612286 LOC100996750A0A140TA64 210 aa4.89□□□□□ -1.63
HOXA3-207ENST00000612286 KRTAP4-3Q9BYR4 195 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms