RNA–Protein interactions for RNA: ENST00000611776.4

ABCA13-208, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 1 (best)

Gene ABCA13, Length 7,250 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-208ENST00000611776 SPRR5A0A1B0GTR4 108 aa3.34□□□□□ -1.87
ABCA13-208ENST00000611776 KMT2AQ03164 3969 aa3.33□□□□□ -1.88
ABCA13-208ENST00000611776 MT1HL1P0DM35 61 aa3.31□□□□□ -1.88
ABCA13-208ENST00000611776 SPRR2FQ96RM1 72 aa3.3□□□□□ -1.88
ABCA13-208ENST00000611776 KRTAP10-5P60370 271 aa3.29□□□□□ -1.88
ABCA13-208ENST00000611776 DNAH7Q8WXX0 4024 aa3.28□□□□□ -1.88
ABCA13-208ENST00000611776 KRTAP3-1Q9BYR8 98 aa3.27□□□□□ -1.89
ABCA13-208ENST00000611776 SPRR2EP22531 72 aa3.26□□□□□ -1.89
ABCA13-208ENST00000611776 SPRR2BP35325 72 aa3.26□□□□□ -1.89
ABCA13-208ENST00000611776 SPRR2AP35326 72 aa3.26□□□□□ -1.89
ABCA13-208ENST00000611776 DNAH9Q9NYC9 4486 aa3.25□□□□□ -1.89
ABCA13-208ENST00000611776 KRTAP13-4Q3LI77 160 aa3.24□□□□□ -1.89
ABCA13-208ENST00000611776 DNAH1Q9P2D7 4330 aa3.23□□□□□ -1.89
ABCA13-208ENST00000611776 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
ABCA13-208ENST00000611776 ALMS1Q8TCU4 4167 aa3.19□□□□□ -1.9
ABCA13-208ENST00000611776 DNAH3Q8TD57 4116 aa3.19□□□□□ -1.9
ABCA13-208ENST00000611776 DNAH2Q9P225 4427 aa3.17□□□□□ -1.9
ABCA13-208ENST00000611776 VPS13BQ7Z7G8 4022 aa3.17□□□□□ -1.9
ABCA13-208ENST00000611776 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
ABCA13-208ENST00000611776 DNAH6Q9C0G6 4158 aa3.16□□□□□ -1.9
ABCA13-208ENST00000611776 SPRR2DP22532 72 aa3.15□□□□□ -1.9
ABCA13-208ENST00000611776 PLECQ15149 4684 aaKnown RBP3.15□□□□□ -1.91
ABCA13-208ENST00000611776 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
ABCA13-208ENST00000611776 KRTAP23-1A1A580 65 aa3.13□□□□□ -1.91
ABCA13-208ENST00000611776 KRTAP9-2Q9BYQ4 174 aa3.13□□□□□ -1.91
ABCA13-208ENST00000611776 DNAH11Q96DT5 4516 aa3.11□□□□□ -1.91
ABCA13-208ENST00000611776 PRKDCP78527 4128 aaKnown RBP3.11□□□□□ -1.91
ABCA13-208ENST00000611776 DNAH8Q96JB1 4490 aa3.11□□□□□ -1.91
ABCA13-208ENST00000611776 HECTD4Q9Y4D8 3996 aa3.11□□□□□ -1.91
ABCA13-208ENST00000611776 KRTAP10-4P60372 401 aaPredicted RBP3.1□□□□□ -1.91
ABCA13-208ENST00000611776 DNAH17Q9UFH2 4485 aa3.09□□□□□ -1.91
ABCA13-208ENST00000611776 STARD9Q9P2P6 4700 aa3.09□□□□□ -1.91
ABCA13-208ENST00000611776 VPS13DQ5THJ4 4388 aa3.08□□□□□ -1.92
ABCA13-208ENST00000611776 KRTAP3-3Q9BYR6 98 aa3.06□□□□□ -1.92
ABCA13-208ENST00000611776 MT1HP80294 61 aa3.05□□□□□ -1.92
ABCA13-208ENST00000611776 KRTAP3-2Q9BYR7 98 aa3.03□□□□□ -1.92
ABCA13-208ENST00000611776 INE1O15225 51 aa3.02□□□□□ -1.93
ABCA13-208ENST00000611776 LCE2BO14633 110 aa2.97□□□□□ -1.93
ABCA13-208ENST00000611776 KRTAP20-1Q3LI63 56 aa2.95□□□□□ -1.94
ABCA13-208ENST00000611776 PKHD1P08F94 4074 aa2.94□□□□□ -1.94
ABCA13-208ENST00000611776 DYNC2H1Q8NCM8 4307 aaKnown RBP2.94□□□□□ -1.94
ABCA13-208ENST00000611776 FAT1Q14517 4588 aa2.93□□□□□ -1.94
ABCA13-208ENST00000611776 FAT2Q9NYQ8 4349 aa2.92□□□□□ -1.94
ABCA13-208ENST00000611776 KRTAP9-7A8MTY7 169 aa2.92□□□□□ -1.94
ABCA13-208ENST00000611776 LCE2CQ5TA81 110 aa2.91□□□□□ -1.94
ABCA13-208ENST00000611776 LCE2DQ5TA82 110 aaPredicted RBP2.91□□□□□ -1.94
ABCA13-208ENST00000611776 LRP1BQ9NZR2 4599 aa2.91□□□□□ -1.94
ABCA13-208ENST00000611776 DNAH5Q8TE73 4624 aa2.9□□□□□ -1.95
ABCA13-208ENST00000611776 MT4P47944 62 aa2.89□□□□□ -1.95
ABCA13-208ENST00000611776 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
ABCA13-208ENST00000611776 KRTAP19-1Q8IUB9 90 aa2.88□□□□□ -1.95
ABCA13-208ENST00000611776 FAT3Q8TDW7 4589 aa2.87□□□□□ -1.95
ABCA13-208ENST00000611776 MT2AP02795 61 aa2.87□□□□□ -1.95
ABCA13-208ENST00000611776 KRTAP4-1Q9BYQ7 146 aa2.85□□□□□ -1.95
ABCA13-208ENST00000611776 MYCBP2O75592 4640 aa2.85□□□□□ -1.95
ABCA13-208ENST00000611776 DNHD1Q96M86 4753 aa2.84□□□□□ -1.95
ABCA13-208ENST00000611776 APOBP04114 4563 aaKnown RBP2.84□□□□□ -1.95
ABCA13-208ENST00000611776 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
ABCA13-208ENST00000611776 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
ABCA13-208ENST00000611776 LRP1Q07954 4544 aaKnown RBP2.83□□□□□ -1.96
ABCA13-208ENST00000611776 LPAP08519 4548 aa2.82□□□□□ -1.96
ABCA13-208ENST00000611776 MT1FP04733 61 aa2.8□□□□□ -1.96
ABCA13-208ENST00000611776 SACSQ9NZJ4 4579 aa2.79□□□□□ -1.96
ABCA13-208ENST00000611776 DYNC1H1Q14204 4646 aaKnown RBP2.77□□□□□ -1.97
ABCA13-208ENST00000611776 LCE3BQ5TA77 95 aa2.75□□□□□ -1.97
ABCA13-208ENST00000611776 PKD1P98161 4303 aa2.75□□□□□ -1.97
ABCA13-208ENST00000611776 PKHD1L1Q86WI1 4243 aa2.73□□□□□ -1.97
ABCA13-208ENST00000611776 HSPG2P98160 4391 aa2.73□□□□□ -1.97
ABCA13-208ENST00000611776 HYDINQ4G0P3 5121 aa2.73□□□□□ -1.97
ABCA13-208ENST00000611776 SPRR2GQ9BYE4 73 aa2.72□□□□□ -1.97
ABCA13-208ENST00000611776 TNXBP22105 4242 aa2.68□□□□□ -1.98
ABCA13-208ENST00000611776 RYR1P21817 5038 aa2.67□□□□□ -1.98
ABCA13-208ENST00000611776 KRTAP19-5Q3LI72 72 aa2.66□□□□□ -1.98
ABCA13-208ENST00000611776 LRP2P98164 4655 aa2.63□□□□□ -1.99
ABCA13-208ENST00000611776 KRTAP2-3P0C7H8 128 aa2.61□□□□□ -1.99
ABCA13-208ENST00000611776 KRTAP2-4Q9BYR9 128 aa2.61□□□□□ -1.99
ABCA13-208ENST00000611776 BIRC6Q9NR09 4857 aa2.61□□□□□ -1.99
ABCA13-208ENST00000611776 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.6□□□□□ -1.99
ABCA13-208ENST00000611776 KRTAP19-6Q3LI70 58 aa2.6□□□□□ -1.99
ABCA13-208ENST00000611776 HERC2O95714 4834 aa2.58□□□□□ -2
ABCA13-208ENST00000611776 LCE3EQ5T5B0 92 aa2.58□□□□□ -2
ABCA13-208ENST00000611776 SYNE2Q8WXH0 6885 aaKnown RBP2.57□□□□□ -2
ABCA13-208ENST00000611776 KRTAP4-9Q9BYQ8 210 aa2.57□□□□□ -2
ABCA13-208ENST00000611776 MT1GP13640 62 aa2.57□□□□□ -2
ABCA13-208ENST00000611776 LCE3CQ5T5A8 94 aa2.57□□□□□ -2
ABCA13-208ENST00000611776 LCE1BQ5T7P3 118 aa2.56□□□□□ -2
ABCA13-208ENST00000611776 FLGP20930 4061 aaPredicted RBP2.55□□□□□ -2
ABCA13-208ENST00000611776 RYR3Q15413 4870 aa2.53□□□□□ -2
ABCA13-208ENST00000611776 LCE1DQ5T752 114 aa2.51□□□□□ -2.01
ABCA13-208ENST00000611776 LCE5AQ5TCM9 118 aa2.51□□□□□ -2.01
ABCA13-208ENST00000611776 KRTAP4-8A0A0G2JLE6 195 aa2.5□□□□□ -2.01
ABCA13-208ENST00000611776 KRTAP4-8Q9BYQ9 185 aa2.5□□□□□ -2.01
ABCA13-208ENST00000611776 KMT2CQ8NEZ4 4911 aaKnown RBP2.49□□□□□ -2.01
ABCA13-208ENST00000611776 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
ABCA13-208ENST00000611776 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
ABCA13-208ENST00000611776 LCE1EQ5T753 118 aa2.49□□□□□ -2.01
ABCA13-208ENST00000611776 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
ABCA13-208ENST00000611776 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
ABCA13-208ENST00000611776 KRTAP2-2Q9BYT5 123 aa2.47□□□□□ -2.01
ABCA13-208ENST00000611776 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms