RNA–Protein interactions for RNA: ENST00000610322.4

RCC1L-201, Transcript of RCC1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1L, Length 2,300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1L-201ENST00000610322 ROMO1P60602 79 aa13.65□□□□□ -0.22
RCC1L-201ENST00000610322 KRTAP17-1Q9BYP8 105 aa13.63□□□□□ -0.23
RCC1L-201ENST00000610322 KIAA1109Q2LD37 5005 aa13.63□□□□□ -0.23
RCC1L-201ENST00000610322 Q5VSD8 79 aa13.59□□□□□ -0.23
RCC1L-201ENST00000610322 CRIPTQ9P021 101 aa13.5□□□□□ -0.25
RCC1L-201ENST00000610322 LRP1Q07954 4544 aaKnown RBP13.43□□□□□ -0.26
RCC1L-201ENST00000610322 RPL37P61927 97 aaKnown RBP13.42□□□□□ -0.26
RCC1L-201ENST00000610322 FLG2Q5D862 2391 aaPredicted RBP13.4□□□□□ -0.26
RCC1L-201ENST00000610322 KRTAP10-6P60371 365 aaPredicted RBP13.38□□□□□ -0.27
RCC1L-201ENST00000610322 KRTAP3-3Q9BYR6 98 aa13.32□□□□□ -0.28
RCC1L-201ENST00000610322 TNXBP22105 4242 aa13.3□□□□□ -0.28
RCC1L-201ENST00000610322 KRTAP13-4Q3LI77 160 aa13.29□□□□□ -0.28
RCC1L-201ENST00000610322 MYCBP2O75592 4640 aa13.27□□□□□ -0.29
RCC1L-201ENST00000610322 FAT3Q8TDW7 4589 aa13.26□□□□□ -0.29
RCC1L-201ENST00000610322 KRTAP3-2Q9BYR7 98 aa13.25□□□□□ -0.29
RCC1L-201ENST00000610322 KRTAP10-8P60410 259 aa13.24□□□□□ -0.29
RCC1L-201ENST00000610322 A0A0D9SG42 100 aa13.23□□□□□ -0.29
RCC1L-201ENST00000610322 P0C880 135 aa13.22□□□□□ -0.29
RCC1L-201ENST00000610322 KRTAP4-5Q9BYR2 181 aa13.21□□□□□ -0.29
RCC1L-201ENST00000610322 TPRXLQ17RH7 258 aa13.16□□□□□ -0.3
RCC1L-201ENST00000610322 S4R3F8 94 aa13.16□□□□□ -0.3
RCC1L-201ENST00000610322 MT1HL1P0DM35 61 aa13.1□□□□□ -0.31
RCC1L-201ENST00000610322 BIRC6Q9NR09 4857 aa13.08□□□□□ -0.32
RCC1L-201ENST00000610322 SPINT4Q6UDR6 99 aa13.06□□□□□ -0.32
RCC1L-201ENST00000610322 DMBT1Q9UGM3 2413 aaPredicted RBP13.04□□□□□ -0.32
RCC1L-201ENST00000610322 XP32Q5T750 250 aa13.02□□□□□ -0.33
RCC1L-201ENST00000610322 ABCA13Q86UQ4 5058 aa12.99□□□□□ -0.33
RCC1L-201ENST00000610322 C10orf95Q9H7T3 257 aa12.97□□□□□ -0.33
RCC1L-201ENST00000610322 HERC2O95714 4834 aa12.95□□□□□ -0.34
RCC1L-201ENST00000610322 KRTAP12-2P59991 146 aa12.91□□□□□ -0.34
RCC1L-201ENST00000610322 KRTAP15-1Q3LI76 137 aa12.82□□□□□ -0.36
RCC1L-201ENST00000610322 KRTAP12-1P59990 96 aa12.81□□□□□ -0.36
RCC1L-201ENST00000610322 M0QZ58 72 aa12.68□□□□□ -0.38
RCC1L-201ENST00000610322 J3QL48 77 aa12.66□□□□□ -0.38
RCC1L-201ENST00000610322 NDUFAF8A1L188 74 aa12.63□□□□□ -0.39
RCC1L-201ENST00000610322 PCLOQ9Y6V0 5065 aa12.56□□□□□ -0.4
RCC1L-201ENST00000610322 LPAP08519 4548 aa12.52□□□□□ -0.4
RCC1L-201ENST00000610322 LRP2P98164 4655 aa12.42□□□□□ -0.42
RCC1L-201ENST00000610322 HERC1Q15751 4861 aa12.31□□□□□ -0.44
RCC1L-201ENST00000610322 R4GN34 69 aa12.22□□□□□ -0.45
RCC1L-201ENST00000610322 HMCN2Q8NDA2 5059 aa12.07□□□□□ -0.48
RCC1L-201ENST00000610322 PLAC4Q8WY50 150 aa12.04□□□□□ -0.48
RCC1L-201ENST00000610322 SEC61BP60468 96 aaKnown RBP12.01□□□□□ -0.49
RCC1L-201ENST00000610322 LORP23490 312 aaPredicted RBP11.94□□□□□ -0.5
RCC1L-201ENST00000610322 KRTAP4-1Q9BYQ7 146 aa11.93□□□□□ -0.5
RCC1L-201ENST00000610322 MUC17Q685J3 4493 aa11.88□□□□□ -0.51
RCC1L-201ENST00000610322 PP632Q6XCG6 107 aa11.82□□□□□ -0.52
RCC1L-201ENST00000610322 MUC2Q02817 5179 aa11.8□□□□□ -0.52
RCC1L-201ENST00000610322 CAMK2N1Q7Z7J9 78 aa11.66□□□□□ -0.54
RCC1L-201ENST00000610322 KRTAP19-2Q3LHN2 52 aa11.66□□□□□ -0.54
RCC1L-201ENST00000610322 LUZP6Q538Z0 58 aa11.62□□□□□ -0.55
RCC1L-201ENST00000610322 UBR4Q5T4S7 5183 aa11.6□□□□□ -0.55
RCC1L-201ENST00000610322 RNF213Q63HN8 5207 aa11.45□□□□□ -0.58
RCC1L-201ENST00000610322 A0A0A0MQY5 61 aa11.35□□□□□ -0.59
RCC1L-201ENST00000610322 KRTAP23-1A1A580 65 aa11.33□□□□□ -0.6
RCC1L-201ENST00000610322 TNP1P09430 55 aa11.31□□□□□ -0.6
RCC1L-201ENST00000610322 FAT4Q6V0I7 4981 aa11.29□□□□□ -0.6
RCC1L-201ENST00000610322 FLGP20930 4061 aaPredicted RBP11.28□□□□□ -0.6
RCC1L-201ENST00000610322 LCE2CQ5TA81 110 aa11.27□□□□□ -0.61
RCC1L-201ENST00000610322 SPRR5A0A1B0GTR4 108 aa11.17□□□□□ -0.62
RCC1L-201ENST00000610322 MT1HP80294 61 aa11.03□□□□□ -0.64
RCC1L-201ENST00000610322 M0R2T5 61 aa10.93□□□□□ -0.66
RCC1L-201ENST00000610322 SPRR2GQ9BYE4 73 aa10.86□□□□□ -0.67
RCC1L-201ENST00000610322 KRTAP19-1Q8IUB9 90 aa10.76□□□□□ -0.69
RCC1L-201ENST00000610322 KRTAP9-8Q9BYQ0 159 aa10.63□□□□□ -0.71
RCC1L-201ENST00000610322 LCE3AQ5TA76 89 aa10.62□□□□□ -0.71
RCC1L-201ENST00000610322 MT2AP02795 61 aa10.61□□□□□ -0.71
RCC1L-201ENST00000610322 MT1FP04733 61 aa10.57□□□□□ -0.72
RCC1L-201ENST00000610322 KRTAP10-10P60014 251 aa10.53□□□□□ -0.72
RCC1L-201ENST00000610322 LCE2AQ5TA79 106 aaPredicted RBP10.51□□□□□ -0.73
RCC1L-201ENST00000610322 KRTAP8-1Q8IUC2 63 aa10.4□□□□□ -0.74
RCC1L-201ENST00000610322 KRTAP19-8Q3LI54 63 aa10.33□□□□□ -0.76
RCC1L-201ENST00000610322 PRO2289Q9P1D8 64 aa10.33□□□□□ -0.76
RCC1L-201ENST00000610322 INE1O15225 51 aa10.24□□□□□ -0.77
RCC1L-201ENST00000610322 KRTAP9-3Q9BYQ3 159 aa10.23□□□□□ -0.77
RCC1L-201ENST00000610322 KRTAP10-5P60370 271 aa10.19□□□□□ -0.78
RCC1L-201ENST00000610322 MT1XP80297 61 aa10.16□□□□□ -0.78
RCC1L-201ENST00000610322 MT1BP07438 61 aa10.15□□□□□ -0.78
RCC1L-201ENST00000610322 KRTAP12-3P60328 96 aa10.11□□□□□ -0.79
RCC1L-201ENST00000610322 KRTAP10-12P60413 245 aa10.06□□□□□ -0.8
RCC1L-201ENST00000610322 LCE2BO14633 110 aa9.99□□□□□ -0.81
RCC1L-201ENST00000610322 KRTAP10-7P60409 375 aaPredicted RBP9.88□□□□□ -0.83
RCC1L-201ENST00000610322 USH2AO75445 5202 aa9.81□□□□□ -0.84
RCC1L-201ENST00000610322 LCE3CQ5T5A8 94 aa9.55□□□□□ -0.88
RCC1L-201ENST00000610322 FSIP2Q5CZC0 6907 aa9.54□□□□□ -0.88
RCC1L-201ENST00000610322 KRTAP19-5Q3LI72 72 aa9.53□□□□□ -0.88
RCC1L-201ENST00000610322 LCE2DQ5TA82 110 aaPredicted RBP9.44□□□□□ -0.9
RCC1L-201ENST00000610322 SSPOA2VEC9 5147 aa9.44□□□□□ -0.9
RCC1L-201ENST00000610322 KRTAP19-6Q3LI70 58 aa9.25□□□□□ -0.93
RCC1L-201ENST00000610322 KRTAP9-6A8MVA2 160 aa9.2□□□□□ -0.94
RCC1L-201ENST00000610322 KRTAP4-8A0A0G2JLE6 195 aa9.14□□□□□ -0.95
RCC1L-201ENST00000610322 KRTAP4-8Q9BYQ9 185 aa9.14□□□□□ -0.95
RCC1L-201ENST00000610322 KRTAP9-2Q9BYQ4 174 aa9.13□□□□□ -0.95
RCC1L-201ENST00000610322 KMT2DO14686 5537 aa9.13□□□□□ -0.95
RCC1L-201ENST00000610322 KRTAP2-3P0C7H8 128 aa9.11□□□□□ -0.95
RCC1L-201ENST00000610322 KRTAP2-4Q9BYR9 128 aa9.11□□□□□ -0.95
RCC1L-201ENST00000610322 KRTAP2-1Q9BYU5 128 aa9.11□□□□□ -0.95
RCC1L-201ENST00000610322 KRTAP19-7Q3SYF9 63 aa9.05□□□□□ -0.96
RCC1L-201ENST00000610322 FCGBPQ9Y6R7 5405 aaPredicted RBP9.02□□□□□ -0.97
RCC1L-201ENST00000610322 KRTAP19-4Q3LI73 84 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms