RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 A6NN06 94 aa4.53□□□□□ -1.68
LMBR1-221ENST00000609774 HRES1P13985 223 aa4.53□□□□□ -1.68
LMBR1-221ENST00000609774 Q6ZSA8 131 aa4.53□□□□□ -1.68
LMBR1-221ENST00000609774 KRTAP10-4P60372 401 aaPredicted RBP4.52□□□□□ -1.69
LMBR1-221ENST00000609774 ZNF861PO60384 105 aa4.51□□□□□ -1.69
LMBR1-221ENST00000609774 LRP2P98164 4655 aa4.51□□□□□ -1.69
LMBR1-221ENST00000609774 IGLV5-52A0A0A0MRZ9 124 aa4.5□□□□□ -1.69
LMBR1-221ENST00000609774 A0A087X002 238 aa4.49□□□□□ -1.69
LMBR1-221ENST00000609774 SSBP3-AS1Q7Z2R9 100 aa4.49□□□□□ -1.69
LMBR1-221ENST00000609774 RBM12B-AS1Q9P1G2 102 aa4.49□□□□□ -1.69
LMBR1-221ENST00000609774 PKHD1L1Q86WI1 4243 aa4.48□□□□□ -1.69
LMBR1-221ENST00000609774 PSORS1C2Q9UIG4 136 aa4.47□□□□□ -1.69
LMBR1-221ENST00000609774 A8MU10 97 aa4.46□□□□□ -1.7
LMBR1-221ENST00000609774 DMAC1Q96GE9 116 aa4.46□□□□□ -1.7
LMBR1-221ENST00000609774 TNXBP22105 4242 aa4.45□□□□□ -1.7
LMBR1-221ENST00000609774 A0A1B0GU69 56 aa4.45□□□□□ -1.7
LMBR1-221ENST00000609774 SPINK7P58062 85 aa4.45□□□□□ -1.7
LMBR1-221ENST00000609774 PANO1I0J062 215 aa4.44□□□□□ -1.7
LMBR1-221ENST00000609774 MT1HL1P0DM35 61 aa4.44□□□□□ -1.7
LMBR1-221ENST00000609774 LINC00313P59037 77 aa4.44□□□□□ -1.7
LMBR1-221ENST00000609774 SPINK6Q6UWN8 80 aa4.44□□□□□ -1.7
LMBR1-221ENST00000609774 IGLV7-43P04211 117 aa4.43□□□□□ -1.7
LMBR1-221ENST00000609774 KRTAP13-3Q3SY46 172 aa4.43□□□□□ -1.7
LMBR1-221ENST00000609774 CIRBP-AS1Q8TBR5 109 aa4.43□□□□□ -1.7
LMBR1-221ENST00000609774 PRR26Q8N8Z3 221 aa4.42□□□□□ -1.7
LMBR1-221ENST00000609774 UQCR11O14957 56 aa4.41□□□□□ -1.7
LMBR1-221ENST00000609774 IGKV2-30P06310 120 aa4.4□□□□□ -1.71
LMBR1-221ENST00000609774 Q5W150 140 aa4.4□□□□□ -1.71
LMBR1-221ENST00000609774 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
LMBR1-221ENST00000609774 NOTCH2NLQ7Z3S9 236 aa4.4□□□□□ -1.71
LMBR1-221ENST00000609774 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
LMBR1-221ENST00000609774 ANAPC11Q9NYG5 84 aa4.36□□□□□ -1.71
LMBR1-221ENST00000609774 RETNLBQ9BQ08 111 aa4.34□□□□□ -1.71
LMBR1-221ENST00000609774 FAT4Q6V0I7 4981 aa4.34□□□□□ -1.71
LMBR1-221ENST00000609774 IGKV2D-30A0A075B6S6 120 aa4.32□□□□□ -1.72
LMBR1-221ENST00000609774 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
LMBR1-221ENST00000609774 LINC01554Q52M75 96 aa4.3□□□□□ -1.72
LMBR1-221ENST00000609774 MUC2Q02817 5179 aa4.29□□□□□ -1.72
LMBR1-221ENST00000609774 KRTAP16-1A8MUX0 517 aa4.28□□□□□ -1.72
LMBR1-221ENST00000609774 SPINK1P00995 79 aa4.27□□□□□ -1.73
LMBR1-221ENST00000609774 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
LMBR1-221ENST00000609774 RPS29P62273 56 aaKnown RBP4.26□□□□□ -1.73
LMBR1-221ENST00000609774 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
LMBR1-221ENST00000609774 PRAC1Q96KF2 57 aa4.24□□□□□ -1.73
LMBR1-221ENST00000609774 LPAP08519 4548 aa4.23□□□□□ -1.73
LMBR1-221ENST00000609774 TYMSOSQ8TAI1 123 aa4.23□□□□□ -1.73
LMBR1-221ENST00000609774 K7ERS5 55 aa4.21□□□□□ -1.74
LMBR1-221ENST00000609774 CSAG1Q6PB30 78 aa4.18□□□□□ -1.74
LMBR1-221ENST00000609774 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
LMBR1-221ENST00000609774 KRTAP1-4P0C5Y4 121 aa4.17□□□□□ -1.74
LMBR1-221ENST00000609774 LINC00304Q8N9R0 145 aa4.17□□□□□ -1.74
LMBR1-221ENST00000609774 A0A1B0GU33 70 aa4.16□□□□□ -1.74
LMBR1-221ENST00000609774 FSIP2Q5CZC0 6907 aa4.14□□□□□ -1.75
LMBR1-221ENST00000609774 A8MUU9 505 aa4.13□□□□□ -1.75
LMBR1-221ENST00000609774 H1FX-AS1Q4G0G2 97 aa4.13□□□□□ -1.75
LMBR1-221ENST00000609774 C20orf166-AS1Q96NR2 134 aa4.12□□□□□ -1.75
LMBR1-221ENST00000609774 KRTAP25-1Q3LHN0 102 aa4.1□□□□□ -1.75
LMBR1-221ENST00000609774 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
LMBR1-221ENST00000609774 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.75
LMBR1-221ENST00000609774 H0YAA0 97 aa4.09□□□□□ -1.75
LMBR1-221ENST00000609774 COX6B2Q6YFQ2 88 aa4.06□□□□□ -1.76
LMBR1-221ENST00000609774 MUC17Q685J3 4493 aa4.04□□□□□ -1.76
LMBR1-221ENST00000609774 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
LMBR1-221ENST00000609774 ROMO1P60602 79 aa4.01□□□□□ -1.77
LMBR1-221ENST00000609774 RPL37P61927 97 aaKnown RBP3.99□□□□□ -1.77
LMBR1-221ENST00000609774 TPRXLQ17RH7 258 aa3.95□□□□□ -1.78
LMBR1-221ENST00000609774 S4R3F8 94 aa3.92□□□□□ -1.78
LMBR1-221ENST00000609774 CRIPTQ9P021 101 aa3.9□□□□□ -1.79
LMBR1-221ENST00000609774 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
LMBR1-221ENST00000609774 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
LMBR1-221ENST00000609774 LCE1AQ5T7P2 110 aa3.86□□□□□ -1.79
LMBR1-221ENST00000609774 A0A0D9SG42 100 aa3.85□□□□□ -1.79
LMBR1-221ENST00000609774 M0QZ58 72 aa3.83□□□□□ -1.8
LMBR1-221ENST00000609774 KRTAP4-1Q9BYQ7 146 aa3.83□□□□□ -1.8
LMBR1-221ENST00000609774 KRTAP19-2Q3LHN2 52 aa3.82□□□□□ -1.8
LMBR1-221ENST00000609774 SEC61BP60468 96 aaKnown RBP3.79□□□□□ -1.8
LMBR1-221ENST00000609774 MT1HP80294 61 aa3.79□□□□□ -1.8
LMBR1-221ENST00000609774 P0C880 135 aa3.78□□□□□ -1.8
LMBR1-221ENST00000609774 KRTAP13-4Q3LI77 160 aa3.78□□□□□ -1.8
LMBR1-221ENST00000609774 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.78□□□□□ -1.8
LMBR1-221ENST00000609774 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
LMBR1-221ENST00000609774 KRTAP10-7P60409 375 aaPredicted RBP3.74□□□□□ -1.81
LMBR1-221ENST00000609774 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
LMBR1-221ENST00000609774 KRTAP12-1P59990 96 aa3.73□□□□□ -1.81
LMBR1-221ENST00000609774 KRTAP12-2P59991 146 aa3.72□□□□□ -1.81
LMBR1-221ENST00000609774 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
LMBR1-221ENST00000609774 USH2AO75445 5202 aa3.71□□□□□ -1.82
LMBR1-221ENST00000609774 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
LMBR1-221ENST00000609774 FCGBPQ9Y6R7 5405 aaPredicted RBP3.69□□□□□ -1.82
LMBR1-221ENST00000609774 FLGP20930 4061 aaPredicted RBP3.68□□□□□ -1.82
LMBR1-221ENST00000609774 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
LMBR1-221ENST00000609774 MACF1Q9UPN3 7388 aaKnown RBP3.65□□□□□ -1.82
LMBR1-221ENST00000609774 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.83
LMBR1-221ENST00000609774 R4GN34 69 aa3.64□□□□□ -1.83
LMBR1-221ENST00000609774 PP632Q6XCG6 107 aa3.61□□□□□ -1.83
LMBR1-221ENST00000609774 M0R2T5 61 aa3.6□□□□□ -1.83
LMBR1-221ENST00000609774 PLAC4Q8WY50 150 aa3.57□□□□□ -1.84
LMBR1-221ENST00000609774 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
LMBR1-221ENST00000609774 NEBP20929 6669 aa3.53□□□□□ -1.84
LMBR1-221ENST00000609774 KRTAP6-3Q3LI67 103 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 287 ms