RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
SHANK2-220ENST00000608988 DYNC1H1Q14204 4646 aaKnown RBP11.46□□□□□ -0.57
SHANK2-220ENST00000608988 S4R3F8 94 aa11.45□□□□□ -0.58
SHANK2-220ENST00000608988 CRIPTQ9P021 101 aa11.42□□□□□ -0.58
SHANK2-220ENST00000608988 KRTAP13-4Q3LI77 160 aa11.42□□□□□ -0.58
SHANK2-220ENST00000608988 FLG2Q5D862 2391 aaPredicted RBP11.37□□□□□ -0.59
SHANK2-220ENST00000608988 A0A0D9SG42 100 aa11.34□□□□□ -0.59
SHANK2-220ENST00000608988 KRTAP10-8P60410 259 aa11.34□□□□□ -0.59
SHANK2-220ENST00000608988 TPRXLQ17RH7 258 aa11.29□□□□□ -0.6
SHANK2-220ENST00000608988 XP32Q5T750 250 aa11.27□□□□□ -0.6
SHANK2-220ENST00000608988 P0C880 135 aa11.25□□□□□ -0.61
SHANK2-220ENST00000608988 SPINT4Q6UDR6 99 aa11.18□□□□□ -0.62
SHANK2-220ENST00000608988 FAT1Q14517 4588 aa11.17□□□□□ -0.62
SHANK2-220ENST00000608988 FAT3Q8TDW7 4589 aa11.14□□□□□ -0.63
SHANK2-220ENST00000608988 HSPG2P98160 4391 aa11.13□□□□□ -0.63
SHANK2-220ENST00000608988 EPPK1P58107 5090 aaKnown RBP11.13□□□□□ -0.63
SHANK2-220ENST00000608988 KRTAP12-2P59991 146 aa11.11□□□□□ -0.63
SHANK2-220ENST00000608988 TNXBP22105 4242 aa11.11□□□□□ -0.63
SHANK2-220ENST00000608988 M0QZ58 72 aa11.08□□□□□ -0.64
SHANK2-220ENST00000608988 KRTAP12-1P59990 96 aa11.08□□□□□ -0.64
SHANK2-220ENST00000608988 DMBT1Q9UGM3 2413 aaPredicted RBP11.08□□□□□ -0.64
SHANK2-220ENST00000608988 RYR1P21817 5038 aa11.06□□□□□ -0.64
SHANK2-220ENST00000608988 C10orf95Q9H7T3 257 aa11.05□□□□□ -0.64
SHANK2-220ENST00000608988 LRP1Q07954 4544 aaKnown RBP11.04□□□□□ -0.64
SHANK2-220ENST00000608988 Q5VSD8 79 aa11.02□□□□□ -0.65
SHANK2-220ENST00000608988 KRTAP15-1Q3LI76 137 aa11□□□□□ -0.65
SHANK2-220ENST00000608988 KIAA1109Q2LD37 5005 aa11□□□□□ -0.65
SHANK2-220ENST00000608988 KRTAP17-1Q9BYP8 105 aa10.95□□□□□ -0.66
SHANK2-220ENST00000608988 MT1HL1P0DM35 61 aa10.8□□□□□ -0.68
SHANK2-220ENST00000608988 BIRC6Q9NR09 4857 aa10.76□□□□□ -0.69
SHANK2-220ENST00000608988 NDUFAF8A1L188 74 aa10.74□□□□□ -0.69
SHANK2-220ENST00000608988 HERC2O95714 4834 aa10.65□□□□□ -0.71
SHANK2-220ENST00000608988 MYCBP2O75592 4640 aa10.63□□□□□ -0.71
SHANK2-220ENST00000608988 R4GN34 69 aa10.59□□□□□ -0.71
SHANK2-220ENST00000608988 KRTAP4-5Q9BYR2 181 aa10.59□□□□□ -0.71
SHANK2-220ENST00000608988 ABCA13Q86UQ4 5058 aa10.5□□□□□ -0.73
SHANK2-220ENST00000608988 SEC61BP60468 96 aaKnown RBP10.4□□□□□ -0.74
SHANK2-220ENST00000608988 PLAC4Q8WY50 150 aa10.37□□□□□ -0.75
SHANK2-220ENST00000608988 PP632Q6XCG6 107 aa10.34□□□□□ -0.75
SHANK2-220ENST00000608988 LRP2P98164 4655 aa10.25□□□□□ -0.77
SHANK2-220ENST00000608988 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
SHANK2-220ENST00000608988 LPAP08519 4548 aa10.24□□□□□ -0.77
SHANK2-220ENST00000608988 PCLOQ9Y6V0 5065 aa10.2□□□□□ -0.78
SHANK2-220ENST00000608988 CAMK2N1Q7Z7J9 78 aa10.1□□□□□ -0.79
SHANK2-220ENST00000608988 KRTAP4-1Q9BYQ7 146 aa10.06□□□□□ -0.8
SHANK2-220ENST00000608988 KRTAP19-2Q3LHN2 52 aa10.05□□□□□ -0.8
SHANK2-220ENST00000608988 LUZP6Q538Z0 58 aa10.03□□□□□ -0.8
SHANK2-220ENST00000608988 MUC17Q685J3 4493 aa10□□□□□ -0.81
SHANK2-220ENST00000608988 KRTAP23-1A1A580 65 aa9.99□□□□□ -0.81
SHANK2-220ENST00000608988 HERC1Q15751 4861 aa9.96□□□□□ -0.81
SHANK2-220ENST00000608988 J3QL48 77 aa9.96□□□□□ -0.81
SHANK2-220ENST00000608988 TNP1P09430 55 aa9.84□□□□□ -0.83
SHANK2-220ENST00000608988 HMCN2Q8NDA2 5059 aa9.82□□□□□ -0.84
SHANK2-220ENST00000608988 A0A0A0MQY5 61 aa9.79□□□□□ -0.84
SHANK2-220ENST00000608988 SPRR5A0A1B0GTR4 108 aa9.7□□□□□ -0.86
SHANK2-220ENST00000608988 FLGP20930 4061 aaPredicted RBP9.58□□□□□ -0.88
SHANK2-220ENST00000608988 SPRR2GQ9BYE4 73 aa9.45□□□□□ -0.9
SHANK2-220ENST00000608988 MUC2Q02817 5179 aa9.35□□□□□ -0.91
SHANK2-220ENST00000608988 UBR4Q5T4S7 5183 aa9.35□□□□□ -0.91
SHANK2-220ENST00000608988 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
SHANK2-220ENST00000608988 LCE2CQ5TA81 110 aa9.26□□□□□ -0.93
SHANK2-220ENST00000608988 RNF213Q63HN8 5207 aa9.24□□□□□ -0.93
SHANK2-220ENST00000608988 LCE3AQ5TA76 89 aa9.17□□□□□ -0.94
SHANK2-220ENST00000608988 KRTAP8-1Q8IUC2 63 aa9.08□□□□□ -0.96
SHANK2-220ENST00000608988 M0R2T5 61 aa9.02□□□□□ -0.96
SHANK2-220ENST00000608988 KRTAP19-8Q3LI54 63 aa9□□□□□ -0.97
SHANK2-220ENST00000608988 FAT4Q6V0I7 4981 aa8.99□□□□□ -0.97
SHANK2-220ENST00000608988 MT1HP80294 61 aa8.98□□□□□ -0.97
SHANK2-220ENST00000608988 MT2AP02795 61 aa8.96□□□□□ -0.98
SHANK2-220ENST00000608988 KRTAP10-10P60014 251 aa8.94□□□□□ -0.98
SHANK2-220ENST00000608988 MT1FP04733 61 aa8.94□□□□□ -0.98
SHANK2-220ENST00000608988 PRO2289Q9P1D8 64 aa8.91□□□□□ -0.98
SHANK2-220ENST00000608988 INE1O15225 51 aa8.9□□□□□ -0.98
SHANK2-220ENST00000608988 KRTAP9-8Q9BYQ0 159 aa8.84□□□□□ -0.99
SHANK2-220ENST00000608988 KRTAP10-5P60370 271 aa8.81□□□□□ -1
SHANK2-220ENST00000608988 KRTAP12-3P60328 96 aa8.77□□□□□ -1.01
SHANK2-220ENST00000608988 MT1XP80297 61 aa8.77□□□□□ -1.01
SHANK2-220ENST00000608988 MT1BP07438 61 aa8.76□□□□□ -1.01
SHANK2-220ENST00000608988 KRTAP10-12P60413 245 aa8.76□□□□□ -1.01
SHANK2-220ENST00000608988 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
SHANK2-220ENST00000608988 KRTAP10-7P60409 375 aaPredicted RBP8.49□□□□□ -1.05
SHANK2-220ENST00000608988 KRTAP9-3Q9BYQ3 159 aa8.47□□□□□ -1.05
SHANK2-220ENST00000608988 LCE3CQ5T5A8 94 aa8.3□□□□□ -1.08
SHANK2-220ENST00000608988 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
SHANK2-220ENST00000608988 KRTAP19-4Q3LI73 84 aa8.08□□□□□ -1.12
SHANK2-220ENST00000608988 LCE2BO14633 110 aa8□□□□□ -1.13
SHANK2-220ENST00000608988 KRTAP2-3P0C7H8 128 aa7.92□□□□□ -1.14
SHANK2-220ENST00000608988 KRTAP2-4Q9BYR9 128 aa7.92□□□□□ -1.14
SHANK2-220ENST00000608988 KRTAP2-1Q9BYU5 128 aa7.92□□□□□ -1.14
SHANK2-220ENST00000608988 KRTAP9-6A8MVA2 160 aa7.89□□□□□ -1.15
SHANK2-220ENST00000608988 USH2AO75445 5202 aa7.85□□□□□ -1.15
SHANK2-220ENST00000608988 LCE2DQ5TA82 110 aaPredicted RBP7.82□□□□□ -1.16
SHANK2-220ENST00000608988 KRTAP19-7Q3SYF9 63 aa7.81□□□□□ -1.16
SHANK2-220ENST00000608988 KRTAP4-8A0A0G2JLE6 195 aa7.79□□□□□ -1.16
SHANK2-220ENST00000608988 KRTAP4-8Q9BYQ9 185 aa7.79□□□□□ -1.16
SHANK2-220ENST00000608988 MT1LQ93083 61 aa7.65□□□□□ -1.18
SHANK2-220ENST00000608988 SSPOA2VEC9 5147 aa7.63□□□□□ -1.19
SHANK2-220ENST00000608988 MT1EP04732 61 aa7.6□□□□□ -1.19
SHANK2-220ENST00000608988 KRTAP4-7Q9BYR0 210 aa7.58□□□□□ -1.2
SHANK2-220ENST00000608988 KRTAP9-2Q9BYQ4 174 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms